RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 FOXD4L5Q5VV16 416 aaPredicted RBP12.17□□□□□ -0.46
HMGCLL1-205ENST00000398661 FAM184AQ8NB25 1140 aa12.17□□□□□ -0.46
HMGCLL1-205ENST00000398661 FOXD4L4Q8WXT5 416 aaPredicted RBP12.17□□□□□ -0.46
HMGCLL1-205ENST00000398661 CTIFO43310 598 aaKnown RBP12.16□□□□□ -0.46
HMGCLL1-205ENST00000398661 PHF14O94880 888 aa12.16□□□□□ -0.46
HMGCLL1-205ENST00000398661 ADCY5O95622 1261 aa12.16□□□□□ -0.46
HMGCLL1-205ENST00000398661 TTC5Q8N0Z6 440 aa12.16□□□□□ -0.46
HMGCLL1-205ENST00000398661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.16□□□□□ -0.46
HMGCLL1-205ENST00000398661 A1BGP04217 495 aa12.16□□□□□ -0.46
HMGCLL1-205ENST00000398661 FLIIQ13045 1269 aa12.16□□□□□ -0.46
HMGCLL1-205ENST00000398661 STK31Q9BXU1 1019 aa12.15□□□□□ -0.46
HMGCLL1-205ENST00000398661 TMOD3Q9NYL9 352 aa12.15□□□□□ -0.46
HMGCLL1-205ENST00000398661 PLCH1Q4KWH8 1693 aa12.15□□□□□ -0.46
HMGCLL1-205ENST00000398661 ALDH1L2Q3SY69 923 aa12.15□□□□□ -0.46
HMGCLL1-205ENST00000398661 ZBTB7BO15156 539 aaPredicted RBP12.14□□□□□ -0.47
HMGCLL1-205ENST00000398661 SLIT2O94813 1529 aa12.14□□□□□ -0.47
HMGCLL1-205ENST00000398661 COL14A1Q05707 1796 aaKnown RBP12.14□□□□□ -0.47
HMGCLL1-205ENST00000398661 COL22A1Q8NFW1 1626 aaPredicted RBP12.14□□□□□ -0.47
HMGCLL1-205ENST00000398661 PI4KAP2A4QPH2 592 aa12.14□□□□□ -0.47
HMGCLL1-205ENST00000398661 IRX5P78411 483 aaPredicted RBP12.14□□□□□ -0.47
HMGCLL1-205ENST00000398661 FNBP4Q8N3X1 1017 aaPredicted RBP12.14□□□□□ -0.47
HMGCLL1-205ENST00000398661 PI4KAP1Q8N8J0 262 aa12.14□□□□□ -0.47
HMGCLL1-205ENST00000398661 SLC4A9Q96Q91 983 aa12.14□□□□□ -0.47
HMGCLL1-205ENST00000398661 QTRT2Q9H974 415 aaKnown RBP12.14□□□□□ -0.47
HMGCLL1-205ENST00000398661 BRD1O95696 1058 aa12.13□□□□□ -0.47
HMGCLL1-205ENST00000398661 SLFN14P0C7P3 912 aa12.13□□□□□ -0.47
HMGCLL1-205ENST00000398661 CCDC30Q5VVM6 783 aa12.13□□□□□ -0.47
HMGCLL1-205ENST00000398661 INTS3Q68E01 1043 aaKnown RBP12.13□□□□□ -0.47
HMGCLL1-205ENST00000398661 KIAA1524Q8TCG1 905 aa12.13□□□□□ -0.47
HMGCLL1-205ENST00000398661 MEIS3Q99687 375 aa12.13□□□□□ -0.47
HMGCLL1-205ENST00000398661 APBB1O00213 710 aa12.13□□□□□ -0.47
HMGCLL1-205ENST00000398661 KCNJ4P48050 445 aa12.13□□□□□ -0.47
HMGCLL1-205ENST00000398661 TAF7LQ5H9L4 462 aa12.13□□□□□ -0.47
HMGCLL1-205ENST00000398661 PLEKHM2Q8IWE5 1019 aa12.13□□□□□ -0.47
HMGCLL1-205ENST00000398661 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
HMGCLL1-205ENST00000398661 PDIA6Q15084 440 aa12.12□□□□□ -0.47
HMGCLL1-205ENST00000398661 TTC22Q5TAA0 569 aa12.12□□□□□ -0.47
HMGCLL1-205ENST00000398661 SIRT2Q8IXJ6 389 aa12.12□□□□□ -0.47
HMGCLL1-205ENST00000398661 CTNNA3Q9UI47 895 aa12.12□□□□□ -0.47
HMGCLL1-205ENST00000398661 CWF19L2Q2TBE0 894 aaKnown RBP12.12□□□□□ -0.47
HMGCLL1-205ENST00000398661 DNAJC10Q8IXB1 793 aa12.12□□□□□ -0.47
HMGCLL1-205ENST00000398661 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
HMGCLL1-205ENST00000398661 GJD4Q96KN9 370 aaPredicted RBP12.12□□□□□ -0.47
HMGCLL1-205ENST00000398661 LRRC37A3O60309 1634 aa12.12□□□□□ -0.47
HMGCLL1-205ENST00000398661 NCBP1Q09161 790 aaKnown RBP12.11□□□□□ -0.47
HMGCLL1-205ENST00000398661 PYCARDQ9ULZ3 195 aa12.11□□□□□ -0.47
HMGCLL1-205ENST00000398661 SPATA31A6Q5VVP1 1343 aa12.11□□□□□ -0.47
HMGCLL1-205ENST00000398661 DISP2A7MBM2 1401 aa12.11□□□□□ -0.47
HMGCLL1-205ENST00000398661 RGS12O14924 1447 aa12.11□□□□□ -0.47
HMGCLL1-205ENST00000398661 CCDC66A2RUB6 948 aa12.11□□□□□ -0.47
HMGCLL1-205ENST00000398661 NBPF26B4DH59 902 aa12.11□□□□□ -0.47
HMGCLL1-205ENST00000398661 GADD45BO75293 160 aaPredicted RBP12.11□□□□□ -0.47
HMGCLL1-205ENST00000398661 SYCP1Q15431 976 aa12.11□□□□□ -0.47
HMGCLL1-205ENST00000398661 VPS72Q15906 364 aa12.11□□□□□ -0.47
HMGCLL1-205ENST00000398661 NBPF14Q5TI25 921 aa12.11□□□□□ -0.47
HMGCLL1-205ENST00000398661 NBPF10Q6P3W6 841 aaKnown RBP12.11□□□□□ -0.47
HMGCLL1-205ENST00000398661 NBPF15Q8N660 670 aa12.11□□□□□ -0.47
HMGCLL1-205ENST00000398661 KDM4AO75164 1064 aa12.1□□□□□ -0.47
HMGCLL1-205ENST00000398661 COPS6Q7L5N1 327 aa12.1□□□□□ -0.47
HMGCLL1-205ENST00000398661 FMNL2Q96PY5 1086 aa12.1□□□□□ -0.47
HMGCLL1-205ENST00000398661 KCNF1Q9H3M0 494 aa12.1□□□□□ -0.47
HMGCLL1-205ENST00000398661 DDX41Q9UJV9 622 aaKnown RBP12.1□□□□□ -0.47
HMGCLL1-205ENST00000398661 SHANK3Q9BYB0 1731 aa12.1□□□□□ -0.47
HMGCLL1-205ENST00000398661 ATP5J2-PTCD1G3V325 749 aa12.1□□□□□ -0.47
HMGCLL1-205ENST00000398661 TPM3P06753 285 aa12.1□□□□□ -0.47
HMGCLL1-205ENST00000398661 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
HMGCLL1-205ENST00000398661 XAGE3Q8WTP9 111 aa12.1□□□□□ -0.47
HMGCLL1-205ENST00000398661 HCLS1P14317 486 aaPredicted RBP12.09□□□□□ -0.47
HMGCLL1-205ENST00000398661 TTLL7Q6ZT98 887 aa12.09□□□□□ -0.47
HMGCLL1-205ENST00000398661 SEPT12Q8IYM1 358 aa12.09□□□□□ -0.47
HMGCLL1-205ENST00000398661 TMX3Q96JJ7 454 aa12.09□□□□□ -0.47
HMGCLL1-205ENST00000398661 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
HMGCLL1-205ENST00000398661 MORC2Q9Y6X9 1032 aaPredicted RBP12.09□□□□□ -0.47
HMGCLL1-205ENST00000398661 SCN11AQ9UI33 1791 aa12.09□□□□□ -0.47
HMGCLL1-205ENST00000398661 ERVV-2B6SEH9 535 aa12.09□□□□□ -0.47
HMGCLL1-205ENST00000398661 SNRPA1P09661 255 aaKnown RBP12.09□□□□□ -0.47
HMGCLL1-205ENST00000398661 SLC20A2Q08357 652 aa12.09□□□□□ -0.47
HMGCLL1-205ENST00000398661 CCDC183Q5T5S1 534 aa12.09□□□□□ -0.47
HMGCLL1-205ENST00000398661 CASC1Q6TDU7 716 aa12.09□□□□□ -0.47
HMGCLL1-205ENST00000398661 ZBTB3Q9H5J0 574 aa12.09□□□□□ -0.47
HMGCLL1-205ENST00000398661 ABCC4O15439 1325 aa12.08□□□□□ -0.47
HMGCLL1-205ENST00000398661 BRPF1P55201 1214 aaPredicted RBP12.08□□□□□ -0.48
HMGCLL1-205ENST00000398661 USP48Q86UV5 1035 aa12.08□□□□□ -0.48
HMGCLL1-205ENST00000398661 TIGD1Q96MW7 591 aa12.08□□□□□ -0.48
HMGCLL1-205ENST00000398661 DNAJC2Q99543 621 aaKnown RBP12.08□□□□□ -0.48
HMGCLL1-205ENST00000398661 PKD1L3Q7Z443 1732 aa12.08□□□□□ -0.48
HMGCLL1-205ENST00000398661 TOGARAM1Q9Y4F4 1720 aa12.08□□□□□ -0.48
HMGCLL1-205ENST00000398661 SMARCA5O60264 1052 aaPredicted RBP12.08□□□□□ -0.48
HMGCLL1-205ENST00000398661 NBPF7P0C2Y1 421 aaPredicted RBP12.08□□□□□ -0.48
HMGCLL1-205ENST00000398661 TERF2Q15554 542 aa12.08□□□□□ -0.48
HMGCLL1-205ENST00000398661 GDPD2Q9HCC8 539 aa12.08□□□□□ -0.48
HMGCLL1-205ENST00000398661 DBF4Q9UBU7 674 aaPredicted RBP12.08□□□□□ -0.48
HMGCLL1-205ENST00000398661 NRAPQ86VF7 1730 aa12.07□□□□□ -0.48
HMGCLL1-205ENST00000398661 REC8O95072 547 aa12.07□□□□□ -0.48
HMGCLL1-205ENST00000398661 CUL4AQ13619 759 aa12.07□□□□□ -0.48
HMGCLL1-205ENST00000398661 ABCC6O95255 1503 aa12.07□□□□□ -0.48
HMGCLL1-205ENST00000398661 PLCB2Q00722 1185 aa12.07□□□□□ -0.48
HMGCLL1-205ENST00000398661 API5Q9BZZ5 524 aaKnown RBP12.07□□□□□ -0.48
HMGCLL1-205ENST00000398661 PARP4Q9UKK3 1724 aaKnown RBP12.07□□□□□ -0.48
HMGCLL1-205ENST00000398661 HEG1Q9ULI3 1381 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms