RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 TRIM28Q13263 835 aaKnown RBP20.17■□□□□ 0.82
MBD1-207ENST00000398488 JARID2Q92833 1246 aaPredicted RBP20.17■□□□□ 0.82
MBD1-207ENST00000398488 YTHDC1Q96MU7 727 aaKnown RBP20.17■□□□□ 0.82
MBD1-207ENST00000398488 UTP14AQ9BVJ6 771 aaKnown RBP20.17■□□□□ 0.82
MBD1-207ENST00000398488 NPHP1O15259 732 aa20.16■□□□□ 0.82
MBD1-207ENST00000398488 ST5P78524 1137 aa20.16■□□□□ 0.82
MBD1-207ENST00000398488 CWF19L2Q2TBE0 894 aaKnown RBP20.16■□□□□ 0.82
MBD1-207ENST00000398488 ALDH1L2Q3SY69 923 aa20.16■□□□□ 0.82
MBD1-207ENST00000398488 C2CD5Q86YS7 1000 aa20.16■□□□□ 0.82
MBD1-207ENST00000398488 IBTKQ9P2D0 1353 aaPredicted RBP20.16■□□□□ 0.82
MBD1-207ENST00000398488 CT47B1P0C2W7 299 aaPredicted RBP20.15■□□□□ 0.82
MBD1-207ENST00000398488 RTL5Q5HYW3 569 aaPredicted RBP20.15■□□□□ 0.82
MBD1-207ENST00000398488 PPP1R42Q7Z4L9 355 aa20.15■□□□□ 0.82
MBD1-207ENST00000398488 DNAAF4Q8WXU2 420 aa20.15■□□□□ 0.82
MBD1-207ENST00000398488 FAM89AQ96GI7 184 aa20.15■□□□□ 0.82
MBD1-207ENST00000398488 NYXQ9GZU5 481 aa20.15■□□□□ 0.82
MBD1-207ENST00000398488 SMC4Q9NTJ3 1288 aa20.15■□□□□ 0.82
MBD1-207ENST00000398488 BRCA1P38398 1863 aaKnown RBP20.14■□□□□ 0.82
MBD1-207ENST00000398488 GTF2E1P29083 439 aaPredicted RBP20.14■□□□□ 0.81
MBD1-207ENST00000398488 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.81
MBD1-207ENST00000398488 TRMT112Q9UI30 125 aaKnown RBP20.14■□□□□ 0.81
MBD1-207ENST00000398488 KLRG2A4D1S0 409 aaPredicted RBP20.13■□□□□ 0.81
MBD1-207ENST00000398488 BCAR3O75815 825 aa20.13■□□□□ 0.81
MBD1-207ENST00000398488 HCLS1P14317 486 aaPredicted RBP20.13■□□□□ 0.81
MBD1-207ENST00000398488 NEURL1BA8MQ27 555 aa20.12■□□□□ 0.81
MBD1-207ENST00000398488 PDE6BP35913 854 aa20.12■□□□□ 0.81
MBD1-207ENST00000398488 SLC10A5Q5PT55 438 aa20.12■□□□□ 0.81
MBD1-207ENST00000398488 UTRNP46939 3433 aa20.12■□□□□ 0.81
MBD1-207ENST00000398488 SRGNP10124 158 aa20.12■□□□□ 0.81
MBD1-207ENST00000398488 BEND3Q5T5X7 828 aa20.12■□□□□ 0.81
MBD1-207ENST00000398488 CCDC191Q8NCU4 936 aa20.12■□□□□ 0.81
MBD1-207ENST00000398488 NOB1Q9ULX3 412 aaKnown RBP20.12■□□□□ 0.81
MBD1-207ENST00000398488 DLEC1Q9Y238 1755 aa20.11■□□□□ 0.81
MBD1-207ENST00000398488 H0YIN7 160 aa20.11■□□□□ 0.81
MBD1-207ENST00000398488 GPR162Q16538 588 aa20.11■□□□□ 0.81
MBD1-207ENST00000398488 CWC25Q9NXE8 425 aaPredicted RBP20.11■□□□□ 0.81
MBD1-207ENST00000398488 SH3TC1Q8TE82 1336 aa20.1■□□□□ 0.81
MBD1-207ENST00000398488 ZNF622Q969S3 477 aaKnown RBP eCLIP20.1■□□□□ 0.816e-7■■■□□ 16.6
MBD1-207ENST00000398488 PIM2Q9P1W9 311 aa20.1■□□□□ 0.81
MBD1-207ENST00000398488 TNNQ9UQP3 1299 aa20.1■□□□□ 0.81
MBD1-207ENST00000398488 BCS1LQ9Y276 419 aa20.1■□□□□ 0.81
MBD1-207ENST00000398488 DDX60Q8IY21 1712 aaKnown RBP20.1■□□□□ 0.81
MBD1-207ENST00000398488 BRPF1P55201 1214 aaPredicted RBP20.09■□□□□ 0.81
MBD1-207ENST00000398488 CRY2Q49AN0 593 aa20.09■□□□□ 0.81
MBD1-207ENST00000398488 SLC51AQ86UW1 340 aa20.09■□□□□ 0.81
MBD1-207ENST00000398488 RIC1Q4ADV7 1423 aa20.09■□□□□ 0.81
MBD1-207ENST00000398488 LAMB2P55268 1798 aa20.08■□□□□ 0.81
MBD1-207ENST00000398488 NEXNQ0ZGT2 675 aa20.08■□□□□ 0.81
MBD1-207ENST00000398488 GCKRQ14397 625 aa20.08■□□□□ 0.81
MBD1-207ENST00000398488 SLC4A10Q6U841 1118 aa20.08■□□□□ 0.81
MBD1-207ENST00000398488 ZBTB38Q8NAP3 1195 aaPredicted RBP20.08■□□□□ 0.81
MBD1-207ENST00000398488 LINS1Q8NG48 757 aa20.08■□□□□ 0.81
MBD1-207ENST00000398488 PCCAP05165 728 aaPredicted RBP20.07■□□□□ 0.8
MBD1-207ENST00000398488 PTPRCP08575 1304 aa20.07■□□□□ 0.8
MBD1-207ENST00000398488 RNF123Q5XPI4 1314 aa20.07■□□□□ 0.8
MBD1-207ENST00000398488 H7C1W4 665 aa20.07■□□□□ 0.8
MBD1-207ENST00000398488 IRS4O14654 1257 aaPredicted RBP20.07■□□□□ 0.8
MBD1-207ENST00000398488 CASP7P55210 303 aa20.07■□□□□ 0.8
MBD1-207ENST00000398488 DALRD3Q5D0E6 543 aaKnown RBP20.07■□□□□ 0.8
MBD1-207ENST00000398488 MASTLQ96GX5 879 aa20.07■□□□□ 0.8
MBD1-207ENST00000398488 COL4A1P02462 1669 aa20.06■□□□□ 0.8
MBD1-207ENST00000398488 SLX4Q8IY92 1834 aa20.06■□□□□ 0.8
MBD1-207ENST00000398488 STYK1Q6J9G0 422 aa20.06■□□□□ 0.8
MBD1-207ENST00000398488 NPR1P16066 1061 aa20.05■□□□□ 0.8
MBD1-207ENST00000398488 TTLL6Q8N841 843 aa20.05■□□□□ 0.8
MBD1-207ENST00000398488 NLRP3Q96P20 1036 aa20.05■□□□□ 0.8
MBD1-207ENST00000398488 HOXA10P31260 410 aaPredicted RBP20.04■□□□□ 0.8
MBD1-207ENST00000398488 OLFM4Q6UX06 510 aa20.04■□□□□ 0.8
MBD1-207ENST00000398488 UBE3BQ7Z3V4 1068 aa20.04■□□□□ 0.8
MBD1-207ENST00000398488 ZNF219Q9P2Y4 722 aaPredicted RBP20.04■□□□□ 0.8
MBD1-207ENST00000398488 PDZRN3Q9UPQ7 1066 aa20.04■□□□□ 0.8
MBD1-207ENST00000398488 CACNA1SQ13698 1873 aa20.03■□□□□ 0.8
MBD1-207ENST00000398488 PRPF40BQ6NWY9 871 aaKnown RBP20.02■□□□□ 0.8
MBD1-207ENST00000398488 FRAT1Q92837 279 aaPredicted RBP20.02■□□□□ 0.8
MBD1-207ENST00000398488 SRCIN1Q9C0H9 1055 aa20.02■□□□□ 0.8
MBD1-207ENST00000398488 TAF1P21675 1872 aa20.02■□□□□ 0.8
MBD1-207ENST00000398488 ARFGEF1Q9Y6D6 1849 aa20.02■□□□□ 0.79
MBD1-207ENST00000398488 CDHR2Q9BYE9 1310 aa20.02■□□□□ 0.79
MBD1-207ENST00000398488 C7orf43Q8WVR3 580 aa20.02■□□□□ 0.79
MBD1-207ENST00000398488 CCDC85AQ96PX6 553 aaPredicted RBP20.02■□□□□ 0.79
MBD1-207ENST00000398488 C21orf2O43822 256 aa20.01■□□□□ 0.79
MBD1-207ENST00000398488 ALDH1L1O75891 902 aa20.01■□□□□ 0.79
MBD1-207ENST00000398488 SF3B3Q15393 1217 aaKnown RBP20.01■□□□□ 0.79
MBD1-207ENST00000398488 RPGRQ92834 1020 aaKnown RBP20.01■□□□□ 0.79
MBD1-207ENST00000398488 CNKSR1Q969H4 720 aa20.01■□□□□ 0.79
MBD1-207ENST00000398488 ABCC4O15439 1325 aa20■□□□□ 0.79
MBD1-207ENST00000398488 TRIM27P14373 513 aa20■□□□□ 0.79
MBD1-207ENST00000398488 KIF16BQ96L93 1317 aa19.99■□□□□ 0.79
MBD1-207ENST00000398488 PDE8AO60658 829 aa19.99■□□□□ 0.79
MBD1-207ENST00000398488 NBPF7P0C2Y1 421 aaPredicted RBP19.99■□□□□ 0.79
MBD1-207ENST00000398488 EPHA10Q5JZY3 1008 aa19.99■□□□□ 0.79
MBD1-207ENST00000398488 ARHGAP45Q92619 1136 aa19.99■□□□□ 0.79
MBD1-207ENST00000398488 CRAMP1Q96RY5 1269 aa19.99■□□□□ 0.79
MBD1-207ENST00000398488 API5Q9BZZ5 524 aaKnown RBP19.99■□□□□ 0.79
MBD1-207ENST00000398488 SEC31BQ9NQW1 1179 aa19.99■□□□□ 0.79
MBD1-207ENST00000398488 DCAF8L1A6NGE4 600 aa19.98■□□□□ 0.79
MBD1-207ENST00000398488 GRM8O00222 908 aa19.98■□□□□ 0.79
MBD1-207ENST00000398488 GRIN3BO60391 1043 aa19.98■□□□□ 0.79
MBD1-207ENST00000398488 PRELPP51888 382 aa19.98■□□□□ 0.79
MBD1-207ENST00000398488 ARHGAP27Q6ZUM4 889 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms