RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
NIFKP1-201ENST00000398317 C2CD5Q86YS7 1000 aa13.12□□□□□ -0.31
NIFKP1-201ENST00000398317 CCDC24Q8N4L8 307 aa13.12□□□□□ -0.31
NIFKP1-201ENST00000398317 TEX13AQ9BXU3 409 aaPredicted RBP13.12□□□□□ -0.31
NIFKP1-201ENST00000398317 U2AF1L5P0DN76 240 aaPredicted RBP13.11□□□□□ -0.31
NIFKP1-201ENST00000398317 U2AF1Q01081 240 aaKnown RBP eCLIP13.11□□□□□ -0.31
NIFKP1-201ENST00000398317 DSG2Q14126 1118 aa13.11□□□□□ -0.31
NIFKP1-201ENST00000398317 TTLL6Q8N841 843 aa13.11□□□□□ -0.31
NIFKP1-201ENST00000398317 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
NIFKP1-201ENST00000398317 NUDCQ9Y266 331 aa13.11□□□□□ -0.31
NIFKP1-201ENST00000398317 SCN7AQ01118 1682 aa13.11□□□□□ -0.31
NIFKP1-201ENST00000398317 PRAMEF22A3QJZ6 481 aa13.1□□□□□ -0.31
NIFKP1-201ENST00000398317 H0YIN7 160 aa13.1□□□□□ -0.31
NIFKP1-201ENST00000398317 IL6STP40189 918 aaPredicted RBP13.1□□□□□ -0.31
NIFKP1-201ENST00000398317 PIP4K2AP48426 406 aaPredicted RBP13.1□□□□□ -0.31
NIFKP1-201ENST00000398317 PRELPP51888 382 aa13.1□□□□□ -0.31
NIFKP1-201ENST00000398317 MCM10Q7L590 875 aa13.1□□□□□ -0.31
NIFKP1-201ENST00000398317 C16orf71Q8IYS4 520 aaPredicted RBP13.1□□□□□ -0.31
NIFKP1-201ENST00000398317 CRISPLD2Q9H0B8 497 aa13.1□□□□□ -0.31
NIFKP1-201ENST00000398317 RRAGCQ9HB90 399 aa13.1□□□□□ -0.31
NIFKP1-201ENST00000398317 USP16Q9Y5T5 823 aa13.1□□□□□ -0.31
NIFKP1-201ENST00000398317 APLP1P51693 650 aa13.09□□□□□ -0.31
NIFKP1-201ENST00000398317 CACNA1SQ13698 1873 aa13.09□□□□□ -0.31
NIFKP1-201ENST00000398317 DCTN1Q14203 1278 aa13.09□□□□□ -0.31
NIFKP1-201ENST00000398317 ZNF622Q969S3 477 aaKnown RBP eCLIP13.09□□□□□ -0.31
NIFKP1-201ENST00000398317 MARVELD3Q96A59 401 aa13.09□□□□□ -0.31
NIFKP1-201ENST00000398317 KDM2BQ8NHM5 1336 aa13.09□□□□□ -0.31
NIFKP1-201ENST00000398317 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
NIFKP1-201ENST00000398317 DOK7Q18PE1 504 aa13.08□□□□□ -0.32
NIFKP1-201ENST00000398317 PRR5LQ6MZQ0 368 aa13.08□□□□□ -0.32
NIFKP1-201ENST00000398317 NPM2Q86SE8 214 aaKnown RBP13.08□□□□□ -0.32
NIFKP1-201ENST00000398317 PLPP6Q8IY26 295 aa13.08□□□□□ -0.32
NIFKP1-201ENST00000398317 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.32
NIFKP1-201ENST00000398317 RBM46Q8TBY0 533 aaKnown RBP13.08□□□□□ -0.32
NIFKP1-201ENST00000398317 RTF1Q92541 710 aaKnown RBP13.08□□□□□ -0.32
NIFKP1-201ENST00000398317 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
NIFKP1-201ENST00000398317 BCORQ6W2J9 1755 aa13.07□□□□□ -0.32
NIFKP1-201ENST00000398317 PCNTO95613 3336 aa13.07□□□□□ -0.32
NIFKP1-201ENST00000398317 LMNB1P20700 586 aa13.07□□□□□ -0.32
NIFKP1-201ENST00000398317 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
NIFKP1-201ENST00000398317 SETDB2Q96T68 719 aa13.07□□□□□ -0.32
NIFKP1-201ENST00000398317 LARP6Q9BRS8 491 aaKnown RBP13.07□□□□□ -0.32
NIFKP1-201ENST00000398317 TNRC6CQ9HCJ0 1690 aaKnown RBP13.07□□□□□ -0.32
NIFKP1-201ENST00000398317 DLG5Q8TDM6 1919 aa13.06□□□□□ -0.32
NIFKP1-201ENST00000398317 NFKBIEO00221 500 aa13.06□□□□□ -0.32
NIFKP1-201ENST00000398317 NPHP1O15259 732 aa13.06□□□□□ -0.32
NIFKP1-201ENST00000398317 PDE6BP35913 854 aa13.06□□□□□ -0.32
NIFKP1-201ENST00000398317 HTRA3P83110 453 aa13.06□□□□□ -0.32
NIFKP1-201ENST00000398317 DNAJC5GQ8N7S2 189 aa13.06□□□□□ -0.32
NIFKP1-201ENST00000398317 BRIP1Q9BX63 1249 aa13.06□□□□□ -0.32
NIFKP1-201ENST00000398317 SLX4Q8IY92 1834 aa13.06□□□□□ -0.32
NIFKP1-201ENST00000398317 TIAM2Q8IVF5 1701 aa13.05□□□□□ -0.32
NIFKP1-201ENST00000398317 WDR90Q96KV7 1748 aa13.05□□□□□ -0.32
NIFKP1-201ENST00000398317 POTEMA6NI47 508 aa13.05□□□□□ -0.32
NIFKP1-201ENST00000398317 C21orf2O43822 256 aa13.05□□□□□ -0.32
NIFKP1-201ENST00000398317 SNRPA1P09661 255 aaKnown RBP13.05□□□□□ -0.32
NIFKP1-201ENST00000398317 FOXK1P85037 733 aa13.05□□□□□ -0.32
NIFKP1-201ENST00000398317 POTEGQ6S5H5 508 aa13.05□□□□□ -0.32
NIFKP1-201ENST00000398317 CNBD1Q8NA66 436 aa13.05□□□□□ -0.32
NIFKP1-201ENST00000398317 KHSRPQ92945 711 aaKnown RBP eCLIP13.05□□□□□ -0.32
NIFKP1-201ENST00000398317 MIS18AQ9NYP9 233 aa13.05□□□□□ -0.32
NIFKP1-201ENST00000398317 FER1L6Q2WGJ9 1857 aa13.05□□□□□ -0.32
NIFKP1-201ENST00000398317 DICER1Q9UPY3 1922 aaKnown RBP13.05□□□□□ -0.32
NIFKP1-201ENST00000398317 GLTPD2A6NH11 291 aa13.04□□□□□ -0.32
NIFKP1-201ENST00000398317 PDE4AP27815 886 aa13.04□□□□□ -0.32
NIFKP1-201ENST00000398317 FSTL1Q12841 308 aa13.04□□□□□ -0.32
NIFKP1-201ENST00000398317 IFFO2Q5TF58 517 aa13.04□□□□□ -0.32
NIFKP1-201ENST00000398317 PDZRN3Q9UPQ7 1066 aa13.04□□□□□ -0.32
NIFKP1-201ENST00000398317 NBPF26B4DH59 902 aa13.03□□□□□ -0.32
NIFKP1-201ENST00000398317 ST5P78524 1137 aa13.03□□□□□ -0.32
NIFKP1-201ENST00000398317 PPP1R15BQ5SWA1 713 aa13.03□□□□□ -0.32
NIFKP1-201ENST00000398317 NBPF10Q6P3W6 841 aaKnown RBP13.03□□□□□ -0.32
NIFKP1-201ENST00000398317 NBPF15Q8N660 670 aa13.03□□□□□ -0.32
NIFKP1-201ENST00000398317 TSHZ2Q9NRE2 1034 aa13.03□□□□□ -0.32
NIFKP1-201ENST00000398317 ZC3H4Q9UPT8 1303 aaKnown RBP13.03□□□□□ -0.32
NIFKP1-201ENST00000398317 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
NIFKP1-201ENST00000398317 TAF7Q15545 349 aaPredicted RBP13.02□□□□□ -0.33
NIFKP1-201ENST00000398317 NBPF5PQ86XG9 351 aaPredicted RBP13.02□□□□□ -0.33
NIFKP1-201ENST00000398317 FAM177BA6PVY3 158 aa13.01□□□□□ -0.33
NIFKP1-201ENST00000398317 SRGNP10124 158 aa13.01□□□□□ -0.33
NIFKP1-201ENST00000398317 VEGFAP15692 232 aaPredicted RBP13.01□□□□□ -0.33
NIFKP1-201ENST00000398317 ERFEQ4G0M1 354 aa13.01□□□□□ -0.33
NIFKP1-201ENST00000398317 ARSIQ5FYB1 569 aa13.01□□□□□ -0.33
NIFKP1-201ENST00000398317 STYK1Q6J9G0 422 aa13.01□□□□□ -0.33
NIFKP1-201ENST00000398317 PRPF40BQ6NWY9 871 aaKnown RBP13.01□□□□□ -0.33
NIFKP1-201ENST00000398317 CLEC4GQ6UXB4 293 aa13.01□□□□□ -0.33
NIFKP1-201ENST00000398317 CNKSR1Q969H4 720 aa13.01□□□□□ -0.33
NIFKP1-201ENST00000398317 ARFGEF2Q9Y6D5 1785 aa13.01□□□□□ -0.33
NIFKP1-201ENST00000398317 RIMBP2O15034 1052 aa13□□□□□ -0.33
NIFKP1-201ENST00000398317 HLFQ16534 295 aa13□□□□□ -0.33
NIFKP1-201ENST00000398317 NGEFQ8N5V2 710 aa13□□□□□ -0.33
NIFKP1-201ENST00000398317 SMC1BQ8NDV3 1235 aa13□□□□□ -0.33
NIFKP1-201ENST00000398317 MASTLQ96GX5 879 aa13□□□□□ -0.33
NIFKP1-201ENST00000398317 NIP7Q9Y221 180 aaKnown RBP eCLIP13□□□□□ -0.33
NIFKP1-201ENST00000398317 ZNF652Q9Y2D9 606 aa13□□□□□ -0.33
NIFKP1-201ENST00000398317 LAMB4A4D0S4 1761 aa12.99□□□□□ -0.33
NIFKP1-201ENST00000398317 POTECB2RU33 542 aa12.99□□□□□ -0.33
NIFKP1-201ENST00000398317 NEFMP07197 916 aa12.99□□□□□ -0.33
NIFKP1-201ENST00000398317 KLRG1Q96E93 195 aa12.99□□□□□ -0.33
NIFKP1-201ENST00000398317 DDX27Q96GQ7 796 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms