RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 CRY2Q49AN0 593 aa24.08■■□□□ 1.44
COLCA2-201ENST00000398035 METTL22Q9BUU2 404 aaPredicted RBP24.08■■□□□ 1.44
COLCA2-201ENST00000398035 SH3TC1Q8TE82 1336 aa24.07■■□□□ 1.44
COLCA2-201ENST00000398035 TCERG1O14776 1098 aaKnown RBP24.07■■□□□ 1.44
COLCA2-201ENST00000398035 NEXNQ0ZGT2 675 aa24.07■■□□□ 1.44
COLCA2-201ENST00000398035 CCDC191Q8NCU4 936 aa24.07■■□□□ 1.44
COLCA2-201ENST00000398035 ZNF428Q96B54 188 aa24.07■■□□□ 1.44
COLCA2-201ENST00000398035 PI4KAP2A4QPH2 592 aa24.06■■□□□ 1.44
COLCA2-201ENST00000398035 ATP5J2-PTCD1G3V325 749 aa24.06■■□□□ 1.44
COLCA2-201ENST00000398035 PI4KAP1Q8N8J0 262 aa24.06■■□□□ 1.44
COLCA2-201ENST00000398035 RPGRQ92834 1020 aaKnown RBP24.06■■□□□ 1.44
COLCA2-201ENST00000398035 RIC1Q4ADV7 1423 aa24.06■■□□□ 1.44
COLCA2-201ENST00000398035 HOXA10P31260 410 aaPredicted RBP24.05■■□□□ 1.44
COLCA2-201ENST00000398035 FLIIQ13045 1269 aa24.05■■□□□ 1.44
COLCA2-201ENST00000398035 RBM17Q96I25 401 aaKnown RBP24.05■■□□□ 1.44
COLCA2-201ENST00000398035 MAP3K2Q9Y2U5 619 aa24.05■■□□□ 1.44
COLCA2-201ENST00000398035 AFDNP55196 1824 aaKnown RBP24.05■■□□□ 1.44
COLCA2-201ENST00000398035 MYD88Q99836 296 aa24.04■■□□□ 1.44
COLCA2-201ENST00000398035 UTRNP46939 3433 aa24.04■■□□□ 1.44
COLCA2-201ENST00000398035 PRPF40BQ6NWY9 871 aaKnown RBP24.03■■□□□ 1.44
COLCA2-201ENST00000398035 KIAA1551Q9HCM1 1747 aa24.03■■□□□ 1.44
COLCA2-201ENST00000398035 C21orf2O43822 256 aa24.02■■□□□ 1.44
COLCA2-201ENST00000398035 CT47B1P0C2W7 299 aaPredicted RBP24.02■■□□□ 1.44
COLCA2-201ENST00000398035 FKBP5Q13451 457 aaPredicted RBP24.02■■□□□ 1.44
COLCA2-201ENST00000398035 TRMT2AQ8IZ69 625 aaKnown RBP24.02■■□□□ 1.44
COLCA2-201ENST00000398035 ZBTB38Q8NAP3 1195 aaPredicted RBP24.02■■□□□ 1.44
COLCA2-201ENST00000398035 CRAMP1Q96RY5 1269 aa24.02■■□□□ 1.44
COLCA2-201ENST00000398035 ABCC12Q96J65 1359 aa24.02■■□□□ 1.44
COLCA2-201ENST00000398035 N4BP2Q86UW6 1770 aaPredicted RBP24.02■■□□□ 1.44
COLCA2-201ENST00000398035 G2E3Q7L622 706 aa24.01■■□□□ 1.43
COLCA2-201ENST00000398035 CWC25Q9NXE8 425 aaPredicted RBP24.01■■□□□ 1.43
COLCA2-201ENST00000398035 FAM89AQ96GI7 184 aa24.01■■□□□ 1.43
COLCA2-201ENST00000398035 CDCA7LQ96GN5 454 aa24.01■■□□□ 1.43
COLCA2-201ENST00000398035 GRIPAP1Q4V328 841 aa24■■□□□ 1.43
COLCA2-201ENST00000398035 CC2D2BQ6DHV5 1058 aa24■■□□□ 1.43
COLCA2-201ENST00000398035 HCLS1P14317 486 aaPredicted RBP23.99■■□□□ 1.43
COLCA2-201ENST00000398035 ZNF784Q8NCA9 323 aaPredicted RBP23.99■■□□□ 1.43
COLCA2-201ENST00000398035 C7orf43Q8WVR3 580 aa23.99■■□□□ 1.43
COLCA2-201ENST00000398035 TMX4Q9H1E5 349 aaPredicted RBP23.99■■□□□ 1.43
COLCA2-201ENST00000398035 GOLGB1Q14789 3259 aaKnown RBP23.99■■□□□ 1.43
COLCA2-201ENST00000398035 NUP98P52948 1817 aa23.98■■□□□ 1.43
COLCA2-201ENST00000398035 PCCAP05165 728 aaPredicted RBP23.98■■□□□ 1.43
COLCA2-201ENST00000398035 RTKN2Q8IZC4 609 aa23.98■■□□□ 1.43
COLCA2-201ENST00000398035 DNAAF4Q8WXU2 420 aa23.98■■□□□ 1.43
COLCA2-201ENST00000398035 IRS4O14654 1257 aaPredicted RBP23.97■■□□□ 1.43
COLCA2-201ENST00000398035 BBOX1O75936 387 aa23.97■■□□□ 1.43
COLCA2-201ENST00000398035 LMNB1P20700 586 aa23.97■■□□□ 1.43
COLCA2-201ENST00000398035 HNRNPUQ00839 825 aaKnown RBP eCLIP23.97■■□□□ 1.43
COLCA2-201ENST00000398035 DDX46Q7L014 1031 aaKnown RBP23.97■■□□□ 1.43
COLCA2-201ENST00000398035 SYNE4Q8N205 404 aa23.97■■□□□ 1.43
COLCA2-201ENST00000398035 ZNF219Q9P2Y4 722 aaPredicted RBP23.97■■□□□ 1.43
COLCA2-201ENST00000398035 ADCY9O60503 1353 aa23.97■■□□□ 1.43
COLCA2-201ENST00000398035 CCDC93Q567U6 631 aa23.96■■□□□ 1.43
COLCA2-201ENST00000398035 C9orf131Q5VYM1 1079 aa23.96■■□□□ 1.43
COLCA2-201ENST00000398035 LTBP3Q9NS15 1303 aa23.95■■□□□ 1.42
COLCA2-201ENST00000398035 IGKV5-2P06315 115 aa23.95■■□□□ 1.42
COLCA2-201ENST00000398035 SF3B3Q15393 1217 aaKnown RBP23.95■■□□□ 1.42
COLCA2-201ENST00000398035 ALDH1L2Q3SY69 923 aa23.95■■□□□ 1.42
COLCA2-201ENST00000398035 LINS1Q8NG48 757 aa23.95■■□□□ 1.42
COLCA2-201ENST00000398035 C3orf67Q6ZVT6 689 aa23.94■■□□□ 1.42
COLCA2-201ENST00000398035 TAOK3Q9H2K8 898 aa23.94■■□□□ 1.42
COLCA2-201ENST00000398035 NEURL1BA8MQ27 555 aa23.93■■□□□ 1.42
COLCA2-201ENST00000398035 RNF181Q9P0P0 153 aa23.93■■□□□ 1.42
COLCA2-201ENST00000398035 NFKBIEO00221 500 aa23.93■■□□□ 1.42
COLCA2-201ENST00000398035 PDE8AO60658 829 aa23.93■■□□□ 1.42
COLCA2-201ENST00000398035 RTL5Q5HYW3 569 aaPredicted RBP23.93■■□□□ 1.42
COLCA2-201ENST00000398035 TMC4Q7Z404 712 aa23.93■■□□□ 1.42
COLCA2-201ENST00000398035 CDHR2Q9BYE9 1310 aa23.92■■□□□ 1.42
COLCA2-201ENST00000398035 ZC3H4Q9UPT8 1303 aaKnown RBP23.92■■□□□ 1.42
COLCA2-201ENST00000398035 ANKRD31Q8N7Z5 1873 aa23.92■■□□□ 1.42
COLCA2-201ENST00000398035 PPEF1O14829 653 aaPredicted RBP23.91■■□□□ 1.42
COLCA2-201ENST00000398035 GCKRQ14397 625 aa23.91■■□□□ 1.42
COLCA2-201ENST00000398035 CWF19L2Q2TBE0 894 aaKnown RBP23.91■■□□□ 1.42
COLCA2-201ENST00000398035 MRPL50Q8N5N7 158 aaKnown RBP23.91■■□□□ 1.42
COLCA2-201ENST00000398035 BRCA1P38398 1863 aaKnown RBP23.9■■□□□ 1.42
COLCA2-201ENST00000398035 PTPRCP08575 1304 aa23.9■■□□□ 1.42
COLCA2-201ENST00000398035 H7C1W4 665 aa23.9■■□□□ 1.42
COLCA2-201ENST00000398035 FKBP4Q02790 459 aaKnown RBP eCLIP23.9■■□□□ 1.42
COLCA2-201ENST00000398035 RASSF7Q02833 373 aa23.9■■□□□ 1.42
COLCA2-201ENST00000398035 GRAPQ13588 217 aa23.9■■□□□ 1.42
COLCA2-201ENST00000398035 GRAPLQ8TC17 118 aaPredicted RBP23.9■■□□□ 1.42
COLCA2-201ENST00000398035 SSH1Q8WYL5 1049 aa23.9■■□□□ 1.42
COLCA2-201ENST00000398035 CCDC152Q4G0S7 254 aa23.89■■□□□ 1.41
COLCA2-201ENST00000398035 SP8Q8IXZ3 490 aa23.89■■□□□ 1.41
COLCA2-201ENST00000398035 ATP6V0A2Q9Y487 856 aa23.89■■□□□ 1.41
COLCA2-201ENST00000398035 ABCC4O15439 1325 aa23.88■■□□□ 1.41
COLCA2-201ENST00000398035 DLEC1Q9Y238 1755 aa23.88■■□□□ 1.41
COLCA2-201ENST00000398035 BEND3Q5T5X7 828 aa23.88■■□□□ 1.41
COLCA2-201ENST00000398035 PSMD1Q99460 953 aa23.88■■□□□ 1.41
COLCA2-201ENST00000398035 GPBP1L1Q9HC44 474 aaPredicted RBP23.88■■□□□ 1.41
COLCA2-201ENST00000398035 ARFGEF1Q9Y6D6 1849 aa23.88■■□□□ 1.41
COLCA2-201ENST00000398035 CHD4Q14839 1912 aa23.88■■□□□ 1.41
COLCA2-201ENST00000398035 F6X3S4 739 aa23.87■■□□□ 1.41
COLCA2-201ENST00000398035 ALDH1L1O75891 902 aa23.86■■□□□ 1.41
COLCA2-201ENST00000398035 BRPF1P55201 1214 aaPredicted RBP23.86■■□□□ 1.41
COLCA2-201ENST00000398035 SMC4Q9NTJ3 1288 aa23.86■■□□□ 1.41
COLCA2-201ENST00000398035 DPY19L2Q6NUT2 758 aa23.85■■□□□ 1.41
COLCA2-201ENST00000398035 UBE3BQ7Z3V4 1068 aa23.85■■□□□ 1.41
COLCA2-201ENST00000398035 VPS33BQ9H267 617 aa23.85■■□□□ 1.41
COLCA2-201ENST00000398035 ZBED9Q6R2W3 1325 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms