RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 GAS2L2Q8NHY3 880 aa5□□□□□ -1.61
UBE3A-202ENST00000397954 POLR3GLQ9BT43 218 aa5□□□□□ -1.61
UBE3A-202ENST00000397954 LMOD3Q0VAK6 560 aa5□□□□□ -1.61
UBE3A-202ENST00000397954 DIXDC1Q155Q3 683 aa5□□□□□ -1.61
UBE3A-202ENST00000397954 RC3H1Q5TC82 1133 aaKnown RBP5□□□□□ -1.61
UBE3A-202ENST00000397954 LARP1Q6PKG0 1096 aaKnown RBP5□□□□□ -1.61
UBE3A-202ENST00000397954 MORC1Q86VD1 984 aa5□□□□□ -1.61
UBE3A-202ENST00000397954 IFNL2Q8IZJ0 200 aa5□□□□□ -1.61
UBE3A-202ENST00000397954 ZCRB1Q8TBF4 217 aaKnown RBP5□□□□□ -1.61
UBE3A-202ENST00000397954 PNISRQ8TF01 805 aaKnown RBP5□□□□□ -1.61
UBE3A-202ENST00000397954 TMEM121BQ9BXQ6 578 aaPredicted RBP5□□□□□ -1.61
UBE3A-202ENST00000397954 TEX13AQ9BXU3 409 aaPredicted RBP5□□□□□ -1.61
UBE3A-202ENST00000397954 CWC22Q9HCG8 908 aaKnown RBP5□□□□□ -1.61
UBE3A-202ENST00000397954 LRRN4Q8WUT4 740 aa4.99□□□□□ -1.61
UBE3A-202ENST00000397954 DCAF5Q96JK2 942 aa4.99□□□□□ -1.61
UBE3A-202ENST00000397954 CAMKK2Q96RR4 588 aa4.99□□□□□ -1.61
UBE3A-202ENST00000397954 CARD14Q9BXL6 1004 aa4.99□□□□□ -1.61
UBE3A-202ENST00000397954 CHD4Q14839 1912 aa4.99□□□□□ -1.61
UBE3A-202ENST00000397954 XPCQ01831 940 aaPredicted RBP4.99□□□□□ -1.61
UBE3A-202ENST00000397954 AKAP4Q5JQC9 854 aa4.99□□□□□ -1.61
UBE3A-202ENST00000397954 PANK3Q9H999 370 aa4.99□□□□□ -1.61
UBE3A-202ENST00000397954 POLKQ9UBT6 870 aa4.99□□□□□ -1.61
UBE3A-202ENST00000397954 BOLA1Q9Y3E2 137 aa4.99□□□□□ -1.61
UBE3A-202ENST00000397954 ERBB4Q15303 1308 aa4.99□□□□□ -1.61
UBE3A-202ENST00000397954 CNTNAP4Q9C0A0 1308 aa4.99□□□□□ -1.61
UBE3A-202ENST00000397954 WASHC4Q2M389 1173 aa4.98□□□□□ -1.61
UBE3A-202ENST00000397954 PXDNLA1KZ92 1463 aa4.98□□□□□ -1.61
UBE3A-202ENST00000397954 BRCA1P38398 1863 aaKnown RBP4.98□□□□□ -1.61
UBE3A-202ENST00000397954 ZC3H6P61129 1189 aaKnown RBP4.98□□□□□ -1.61
UBE3A-202ENST00000397954 CALD1Q05682 793 aaKnown RBP4.98□□□□□ -1.61
UBE3A-202ENST00000397954 FAM98CQ17RN3 349 aaKnown RBP4.98□□□□□ -1.61
UBE3A-202ENST00000397954 BMP2KQ9NSY1 1161 aaPredicted RBP4.98□□□□□ -1.61
UBE3A-202ENST00000397954 DUOX1Q9NRD9 1551 aa4.98□□□□□ -1.61
UBE3A-202ENST00000397954 NEFMP07197 916 aa4.98□□□□□ -1.61
UBE3A-202ENST00000397954 CD46P15529 392 aa4.98□□□□□ -1.61
UBE3A-202ENST00000397954 KCPQ6ZWJ8 1503 aa4.98□□□□□ -1.61
UBE3A-202ENST00000397954 DDX60Q8IY21 1712 aaKnown RBP4.98□□□□□ -1.61
UBE3A-202ENST00000397954 CEMIPQ8WUJ3 1361 aa4.98□□□□□ -1.61
UBE3A-202ENST00000397954 SREK1Q8WXA9 508 aaKnown RBP4.98□□□□□ -1.61
UBE3A-202ENST00000397954 DRC1Q96MC2 740 aa4.98□□□□□ -1.61
UBE3A-202ENST00000397954 MYBBP1AQ9BQG0 1328 aaKnown RBP4.98□□□□□ -1.61
UBE3A-202ENST00000397954 RNF123Q5XPI4 1314 aa4.97□□□□□ -1.61
UBE3A-202ENST00000397954 PIK3CDO00329 1044 aa4.97□□□□□ -1.61
UBE3A-202ENST00000397954 DIAPH1O60610 1272 aaKnown RBP4.97□□□□□ -1.61
UBE3A-202ENST00000397954 CD44P16070 742 aaKnown RBP4.97□□□□□ -1.61
UBE3A-202ENST00000397954 IL13P35225 146 aa4.97□□□□□ -1.61
UBE3A-202ENST00000397954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.97□□□□□ -1.612e-6■■■□□ 17.3
UBE3A-202ENST00000397954 SLAIN1Q8ND83 568 aa4.97□□□□□ -1.61
UBE3A-202ENST00000397954 HLA-CQ95604 372 aa4.97□□□□□ -1.61
UBE3A-202ENST00000397954 SPATA32Q96LK8 384 aa4.97□□□□□ -1.61
UBE3A-202ENST00000397954 KIAA1551Q9HCM1 1747 aa4.97□□□□□ -1.61
UBE3A-202ENST00000397954 PHF14O94880 888 aa4.97□□□□□ -1.61
UBE3A-202ENST00000397954 SSFA2P28290 1259 aa4.97□□□□□ -1.61
UBE3A-202ENST00000397954 NUTM1Q86Y26 1132 aa4.97□□□□□ -1.61
UBE3A-202ENST00000397954 TSC1Q92574 1164 aa4.97□□□□□ -1.61
UBE3A-202ENST00000397954 ANO8Q9HCE9 1232 aaPredicted RBP4.97□□□□□ -1.61
UBE3A-202ENST00000397954 STK32BQ9NY57 414 aa4.97□□□□□ -1.61
UBE3A-202ENST00000397954 AXIN2Q9Y2T1 843 aa4.97□□□□□ -1.61
UBE3A-202ENST00000397954 A0A087WZG4 1122 aa4.96□□□□□ -1.62
UBE3A-202ENST00000397954 DDX11L8A8MPP1 907 aa4.96□□□□□ -1.62
UBE3A-202ENST00000397954 HOXB7P09629 217 aa4.96□□□□□ -1.62
UBE3A-202ENST00000397954 EIF4A2Q14240 407 aaKnown RBP4.96□□□□□ -1.62
UBE3A-202ENST00000397954 TUSC1Q2TAM9 212 aa4.96□□□□□ -1.62
UBE3A-202ENST00000397954 STRN4Q9NRL3 753 aa4.96□□□□□ -1.62
UBE3A-202ENST00000397954 NLRP2Q9NX02 1062 aa4.96□□□□□ -1.62
UBE3A-202ENST00000397954 ANKRD33BA6NCL7 494 aa4.96□□□□□ -1.62
UBE3A-202ENST00000397954 PHKG2P15735 406 aa4.96□□□□□ -1.62
UBE3A-202ENST00000397954 GUCA2AQ02747 115 aa4.96□□□□□ -1.62
UBE3A-202ENST00000397954 C1orf141Q5JVX7 400 aa4.96□□□□□ -1.62
UBE3A-202ENST00000397954 NPAS4Q8IUM7 802 aa4.96□□□□□ -1.62
UBE3A-202ENST00000397954 MARSP56192 900 aaKnown RBP4.95□□□□□ -1.62
UBE3A-202ENST00000397954 CHRNA2Q15822 529 aa4.95□□□□□ -1.62
UBE3A-202ENST00000397954 MARCH10Q8NA82 808 aaPredicted RBP4.95□□□□□ -1.62
UBE3A-202ENST00000397954 L3MBTL3Q96JM7 780 aaPredicted RBP4.95□□□□□ -1.62
UBE3A-202ENST00000397954 SOWAHDA6NJG2 315 aa4.95□□□□□ -1.62
UBE3A-202ENST00000397954 RECKO95980 971 aa4.95□□□□□ -1.62
UBE3A-202ENST00000397954 GRIPAP1Q4V328 841 aa4.95□□□□□ -1.62
UBE3A-202ENST00000397954 GGNBP2Q9H3C7 697 aa4.95□□□□□ -1.62
UBE3A-202ENST00000397954 C10orf71Q711Q0 1435 aa4.95□□□□□ -1.62
UBE3A-202ENST00000397954 ZC3H4Q9UPT8 1303 aaKnown RBP4.95□□□□□ -1.62
UBE3A-202ENST00000397954 FXR2P51116 673 aaKnown RBP eCLIP4.94□□□□□ -1.623e-7■■■□□ 17.2
UBE3A-202ENST00000397954 GIMAP6Q6P9H5 292 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 DEPDC4Q8N2C3 294 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 PTCD2Q8WV60 388 aaKnown RBP4.94□□□□□ -1.62
UBE3A-202ENST00000397954 MTFR1LQ9H019 292 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 NOVA2Q9UNW9 492 aaKnown RBP4.94□□□□□ -1.62
UBE3A-202ENST00000397954 KDM6AO15550 1401 aaPredicted RBP4.94□□□□□ -1.62
UBE3A-202ENST00000397954 DICER1Q9UPY3 1922 aaKnown RBP4.94□□□□□ -1.62
UBE3A-202ENST00000397954 PALLDQ8WX93 1383 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 TNRC6CQ9HCJ0 1690 aaKnown RBP4.94□□□□□ -1.62
UBE3A-202ENST00000397954 IL16Q14005 1332 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 RCCD1A6NED2 376 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 C3orf80F5H4A9 247 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 ATP9BO43861 1147 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 TIE1P35590 1138 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 CRTC2Q53ET0 693 aaPredicted RBP4.94□□□□□ -1.62
UBE3A-202ENST00000397954 EYA1Q99502 592 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 EPAS1Q99814 870 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 BIN2Q9UBW5 565 aaPredicted RBP4.94□□□□□ -1.62
UBE3A-202ENST00000397954 PCDHGC3Q9UN70 934 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms