RNA–Protein interactions for RNA: ENST00000397642.3

AL390728.1-201, humanhuman

BASIC

Gene AL390728.1, Length 1,941 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.1-201ENST00000397642 TRMT112Q9UI30 125 aaKnown RBP13.69□□□□□ -0.22
AL390728.1-201ENST00000397642 IBTKQ9P2D0 1353 aaPredicted RBP13.69□□□□□ -0.22
AL390728.1-201ENST00000397642 NPR1P16066 1061 aa13.68□□□□□ -0.22
AL390728.1-201ENST00000397642 SLFN5Q08AF3 891 aa13.68□□□□□ -0.22
AL390728.1-201ENST00000397642 STYK1Q6J9G0 422 aa13.68□□□□□ -0.22
AL390728.1-201ENST00000397642 G2E3Q7L622 706 aa13.68□□□□□ -0.22
AL390728.1-201ENST00000397642 CNKSR1Q969H4 720 aa13.68□□□□□ -0.22
AL390728.1-201ENST00000397642 CDCA7LQ96GN5 454 aa13.68□□□□□ -0.22
AL390728.1-201ENST00000397642 ISCA1Q9BUE6 129 aa13.68□□□□□ -0.22
AL390728.1-201ENST00000397642 ABCC12Q96J65 1359 aa13.68□□□□□ -0.22
AL390728.1-201ENST00000397642 PI4KAP2A4QPH2 592 aa13.68□□□□□ -0.22
AL390728.1-201ENST00000397642 SYNE4Q8N205 404 aa13.68□□□□□ -0.22
AL390728.1-201ENST00000397642 PI4KAP1Q8N8J0 262 aa13.68□□□□□ -0.22
AL390728.1-201ENST00000397642 TRIM28Q13263 835 aaKnown RBP13.67□□□□□ -0.22
AL390728.1-201ENST00000397642 KSR2Q6VAB6 950 aa13.67□□□□□ -0.22
AL390728.1-201ENST00000397642 MYD88Q99836 296 aa13.67□□□□□ -0.22
AL390728.1-201ENST00000397642 ZNF219Q9P2Y4 722 aaPredicted RBP13.67□□□□□ -0.22
AL390728.1-201ENST00000397642 MAP3K2Q9Y2U5 619 aa13.67□□□□□ -0.22
AL390728.1-201ENST00000397642 CRY2Q49AN0 593 aa13.66□□□□□ -0.22
AL390728.1-201ENST00000397642 SLC10A5Q5PT55 438 aa13.66□□□□□ -0.22
AL390728.1-201ENST00000397642 PRPF40BQ6NWY9 871 aaKnown RBP13.66□□□□□ -0.22
AL390728.1-201ENST00000397642 NLRP3Q96P20 1036 aa13.66□□□□□ -0.22
AL390728.1-201ENST00000397642 METTL22Q9BUU2 404 aaPredicted RBP13.66□□□□□ -0.22
AL390728.1-201ENST00000397642 RNF123Q5XPI4 1314 aa13.66□□□□□ -0.22
AL390728.1-201ENST00000397642 SH3TC1Q8TE82 1336 aa13.66□□□□□ -0.22
AL390728.1-201ENST00000397642 C21orf2O43822 256 aa13.66□□□□□ -0.22
AL390728.1-201ENST00000397642 HCLS1P14317 486 aaPredicted RBP13.66□□□□□ -0.22
AL390728.1-201ENST00000397642 FLIIQ13045 1269 aa13.66□□□□□ -0.22
AL390728.1-201ENST00000397642 FAM89AQ96GI7 184 aa13.66□□□□□ -0.22
AL390728.1-201ENST00000397642 ARFGEF1Q9Y6D6 1849 aa13.66□□□□□ -0.22
AL390728.1-201ENST00000397642 DLEC1Q9Y238 1755 aa13.65□□□□□ -0.22
AL390728.1-201ENST00000397642 ALDH1B1P30837 517 aa13.65□□□□□ -0.22
AL390728.1-201ENST00000397642 RTL5Q5HYW3 569 aaPredicted RBP13.65□□□□□ -0.22
AL390728.1-201ENST00000397642 RPGRQ92834 1020 aaKnown RBP13.65□□□□□ -0.22
AL390728.1-201ENST00000397642 COL11A2P13942 1736 aaPredicted RBP13.65□□□□□ -0.22
AL390728.1-201ENST00000397642 ANKRD36CQ5JPF3 1778 aa13.64□□□□□ -0.23
AL390728.1-201ENST00000397642 FKBP5Q13451 457 aaPredicted RBP13.64□□□□□ -0.23
AL390728.1-201ENST00000397642 C3orf67Q6ZVT6 689 aa13.64□□□□□ -0.23
AL390728.1-201ENST00000397642 ZNF784Q8NCA9 323 aaPredicted RBP13.64□□□□□ -0.23
AL390728.1-201ENST00000397642 CCDC191Q8NCU4 936 aa13.64□□□□□ -0.23
AL390728.1-201ENST00000397642 RIC1Q4ADV7 1423 aa13.64□□□□□ -0.23
AL390728.1-201ENST00000397642 ADCY9O60503 1353 aa13.63□□□□□ -0.23
AL390728.1-201ENST00000397642 SLX4Q8IY92 1834 aa13.63□□□□□ -0.23
AL390728.1-201ENST00000397642 CACNA1FO60840 1977 aa13.63□□□□□ -0.23
AL390728.1-201ENST00000397642 HOXA10P31260 410 aaPredicted RBP13.63□□□□□ -0.23
AL390728.1-201ENST00000397642 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
AL390728.1-201ENST00000397642 NEXNQ0ZGT2 675 aa13.63□□□□□ -0.23
AL390728.1-201ENST00000397642 TRMT2AQ8IZ69 625 aaKnown RBP13.63□□□□□ -0.23
AL390728.1-201ENST00000397642 ARFGEF2Q9Y6D5 1785 aa13.63□□□□□ -0.23
AL390728.1-201ENST00000397642 ZBTB38Q8NAP3 1195 aaPredicted RBP13.62□□□□□ -0.23
AL390728.1-201ENST00000397642 C7orf43Q8WVR3 580 aa13.62□□□□□ -0.23
AL390728.1-201ENST00000397642 RBM17Q96I25 401 aaKnown RBP13.62□□□□□ -0.23
AL390728.1-201ENST00000397642 CWC25Q9NXE8 425 aaPredicted RBP13.62□□□□□ -0.23
AL390728.1-201ENST00000397642 IGKV5-2P06315 115 aa13.62□□□□□ -0.23
AL390728.1-201ENST00000397642 RASSF7Q02833 373 aa13.62□□□□□ -0.23
AL390728.1-201ENST00000397642 C9orf131Q5VYM1 1079 aa13.62□□□□□ -0.23
AL390728.1-201ENST00000397642 TNRC6CQ9HCJ0 1690 aaKnown RBP13.62□□□□□ -0.23
AL390728.1-201ENST00000397642 NFKBIEO00221 500 aa13.61□□□□□ -0.23
AL390728.1-201ENST00000397642 IRS4O14654 1257 aaPredicted RBP13.61□□□□□ -0.23
AL390728.1-201ENST00000397642 CWF19L2Q2TBE0 894 aaKnown RBP13.61□□□□□ -0.23
AL390728.1-201ENST00000397642 SOGA3Q5TF21 947 aa13.61□□□□□ -0.23
AL390728.1-201ENST00000397642 DNAAF4Q8WXU2 420 aa13.61□□□□□ -0.23
AL390728.1-201ENST00000397642 JARID2Q92833 1246 aaPredicted RBP13.61□□□□□ -0.23
AL390728.1-201ENST00000397642 CRAMP1Q96RY5 1269 aa13.61□□□□□ -0.23
AL390728.1-201ENST00000397642 PCCAP05165 728 aaPredicted RBP13.6□□□□□ -0.23
AL390728.1-201ENST00000397642 OLFM4Q6UX06 510 aa13.6□□□□□ -0.23
AL390728.1-201ENST00000397642 RNF181Q9P0P0 153 aa13.6□□□□□ -0.23
AL390728.1-201ENST00000397642 NEURL1BA8MQ27 555 aa13.6□□□□□ -0.23
AL390728.1-201ENST00000397642 F6X3S4 739 aa13.6□□□□□ -0.23
AL390728.1-201ENST00000397642 LMNB1P20700 586 aa13.6□□□□□ -0.23
AL390728.1-201ENST00000397642 CACNA1SQ13698 1873 aa13.6□□□□□ -0.23
AL390728.1-201ENST00000397642 HSP90B1P14625 803 aaKnown RBP13.59□□□□□ -0.23
AL390728.1-201ENST00000397642 CCDC93Q567U6 631 aa13.59□□□□□ -0.23
AL390728.1-201ENST00000397642 DDX46Q7L014 1031 aaKnown RBP13.59□□□□□ -0.23
AL390728.1-201ENST00000397642 SSH1Q8WYL5 1049 aa13.59□□□□□ -0.23
AL390728.1-201ENST00000397642 PRELPP51888 382 aa13.58□□□□□ -0.23
AL390728.1-201ENST00000397642 SF3B3Q15393 1217 aaKnown RBP13.58□□□□□ -0.23
AL390728.1-201ENST00000397642 LINS1Q8NG48 757 aa13.58□□□□□ -0.23
AL390728.1-201ENST00000397642 ZNF526Q8TF50 670 aaPredicted RBP13.58□□□□□ -0.23
AL390728.1-201ENST00000397642 TAOK3Q9H2K8 898 aa13.58□□□□□ -0.23
AL390728.1-201ENST00000397642 RTKN2Q8IZC4 609 aa13.58□□□□□ -0.24
AL390728.1-201ENST00000397642 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
AL390728.1-201ENST00000397642 BCL2L13Q9BXK5 485 aa13.58□□□□□ -0.24
AL390728.1-201ENST00000397642 ABCC4O15439 1325 aa13.58□□□□□ -0.24
AL390728.1-201ENST00000397642 SBF1O95248 1867 aa13.57□□□□□ -0.24
AL390728.1-201ENST00000397642 PPEF1O14829 653 aaPredicted RBP13.57□□□□□ -0.24
AL390728.1-201ENST00000397642 BBOX1O75936 387 aa13.57□□□□□ -0.24
AL390728.1-201ENST00000397642 CT47B1P0C2W7 299 aaPredicted RBP13.57□□□□□ -0.24
AL390728.1-201ENST00000397642 GCKRQ14397 625 aa13.57□□□□□ -0.24
AL390728.1-201ENST00000397642 PDE8AO60658 829 aa13.56□□□□□ -0.24
AL390728.1-201ENST00000397642 CC2D2BQ6DHV5 1058 aa13.56□□□□□ -0.24
AL390728.1-201ENST00000397642 UBE3BQ7Z3V4 1068 aa13.56□□□□□ -0.24
AL390728.1-201ENST00000397642 TMX4Q9H1E5 349 aaPredicted RBP13.56□□□□□ -0.24
AL390728.1-201ENST00000397642 LTBP3Q9NS15 1303 aa13.56□□□□□ -0.24
AL390728.1-201ENST00000397642 H7C1W4 665 aa13.56□□□□□ -0.24
AL390728.1-201ENST00000397642 GRAPQ13588 217 aa13.56□□□□□ -0.24
AL390728.1-201ENST00000397642 ALDH1L2Q3SY69 923 aa13.56□□□□□ -0.24
AL390728.1-201ENST00000397642 BEND3Q5T5X7 828 aa13.56□□□□□ -0.24
AL390728.1-201ENST00000397642 SLC4A10Q6U841 1118 aa13.56□□□□□ -0.24
AL390728.1-201ENST00000397642 GRAPLQ8TC17 118 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms