RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 COL11A2P13942 1736 aaPredicted RBP27.1■■□□□ 1.93
TSPAN4-206ENST00000397408 YBX3P16989 372 aaKnown RBP eCLIP27.09■■□□□ 1.93
TSPAN4-206ENST00000397408 ZNF428Q96B54 188 aa27.09■■□□□ 1.93
TSPAN4-206ENST00000397408 DLEC1Q9Y238 1755 aa27.09■■□□□ 1.93
TSPAN4-206ENST00000397408 METTL22Q9BUU2 404 aaPredicted RBP27.08■■□□□ 1.93
TSPAN4-206ENST00000397408 TNRC6CQ9HCJ0 1690 aaKnown RBP27.08■■□□□ 1.93
TSPAN4-206ENST00000397408 H0YIN7 160 aa27.07■■□□□ 1.92
TSPAN4-206ENST00000397408 CT47B1P0C2W7 299 aaPredicted RBP27.07■■□□□ 1.92
TSPAN4-206ENST00000397408 SSH1Q8WYL5 1049 aa27.07■■□□□ 1.92
TSPAN4-206ENST00000397408 PIM2Q9P1W9 311 aa27.07■■□□□ 1.92
TSPAN4-206ENST00000397408 PDZRN3Q9UPQ7 1066 aa27.07■■□□□ 1.92
TSPAN4-206ENST00000397408 RNF123Q5XPI4 1314 aa27.06■■□□□ 1.92
TSPAN4-206ENST00000397408 TRIM28Q13263 835 aaKnown RBP27.06■■□□□ 1.92
TSPAN4-206ENST00000397408 BCL2L13Q9BXK5 485 aa27.06■■□□□ 1.92
TSPAN4-206ENST00000397408 TRMT112Q9UI30 125 aaKnown RBP27.06■■□□□ 1.92
TSPAN4-206ENST00000397408 BCS1LQ9Y276 419 aa27.06■■□□□ 1.92
TSPAN4-206ENST00000397408 RIC1Q4ADV7 1423 aa27.05■■□□□ 1.92
TSPAN4-206ENST00000397408 MRPL50Q8N5N7 158 aaKnown RBP27.05■■□□□ 1.92
TSPAN4-206ENST00000397408 SH3TC1Q8TE82 1336 aa27.03■■□□□ 1.92
TSPAN4-206ENST00000397408 NEXNQ0ZGT2 675 aa27.03■■□□□ 1.92
TSPAN4-206ENST00000397408 ALDH1L2Q3SY69 923 aa27.03■■□□□ 1.92
TSPAN4-206ENST00000397408 DNAAF4Q8WXU2 420 aa27.03■■□□□ 1.92
TSPAN4-206ENST00000397408 ZNF622Q969S3 477 aaKnown RBP eCLIP27.03■■□□□ 1.92
TSPAN4-206ENST00000397408 SMC4Q9NTJ3 1288 aa27.03■■□□□ 1.92
TSPAN4-206ENST00000397408 UTRNP46939 3433 aa27.02■■□□□ 1.92
TSPAN4-206ENST00000397408 SRGNP10124 158 aa27.02■■□□□ 1.92
TSPAN4-206ENST00000397408 DALRD3Q5D0E6 543 aaKnown RBP27.02■■□□□ 1.92
TSPAN4-206ENST00000397408 KLRG2A4D1S0 409 aaPredicted RBP27.01■■□□□ 1.91
TSPAN4-206ENST00000397408 SYNE4Q8N205 404 aa27.01■■□□□ 1.91
TSPAN4-206ENST00000397408 CCDC191Q8NCU4 936 aa27.01■■□□□ 1.91
TSPAN4-206ENST00000397408 CWC25Q9NXE8 425 aaPredicted RBP27.01■■□□□ 1.91
TSPAN4-206ENST00000397408 F6X3S4 739 aa27■■□□□ 1.91
TSPAN4-206ENST00000397408 IGKV5-2P06315 115 aa27■■□□□ 1.91
TSPAN4-206ENST00000397408 FAM89AQ96GI7 184 aa27■■□□□ 1.91
TSPAN4-206ENST00000397408 GRIN3BO60391 1043 aa26.99■■□□□ 1.91
TSPAN4-206ENST00000397408 RTL5Q5HYW3 569 aaPredicted RBP26.99■■□□□ 1.91
TSPAN4-206ENST00000397408 STYK1Q6J9G0 422 aa26.99■■□□□ 1.91
TSPAN4-206ENST00000397408 TTLL6Q8N841 843 aa26.99■■□□□ 1.91
TSPAN4-206ENST00000397408 MASTLQ96GX5 879 aa26.99■■□□□ 1.91
TSPAN4-206ENST00000397408 HCLS1P14317 486 aaPredicted RBP26.99■■□□□ 1.91
TSPAN4-206ENST00000397408 CWF19L2Q2TBE0 894 aaKnown RBP26.99■■□□□ 1.91
TSPAN4-206ENST00000397408 CRY2Q49AN0 593 aa26.99■■□□□ 1.91
TSPAN4-206ENST00000397408 SLC10A5Q5PT55 438 aa26.99■■□□□ 1.91
TSPAN4-206ENST00000397408 ARFGEF1Q9Y6D6 1849 aa26.99■■□□□ 1.91
TSPAN4-206ENST00000397408 NEURL1BA8MQ27 555 aa26.98■■□□□ 1.91
TSPAN4-206ENST00000397408 NPR1P16066 1061 aa26.98■■□□□ 1.91
TSPAN4-206ENST00000397408 C3orf67Q6ZVT6 689 aa26.98■■□□□ 1.91
TSPAN4-206ENST00000397408 RARSP54136 660 aaKnown RBP26.97■■□□□ 1.91
TSPAN4-206ENST00000397408 ZBTB38Q8NAP3 1195 aaPredicted RBP26.97■■□□□ 1.91
TSPAN4-206ENST00000397408 NLRP3Q96P20 1036 aa26.97■■□□□ 1.91
TSPAN4-206ENST00000397408 PTPRCP08575 1304 aa26.97■■□□□ 1.91
TSPAN4-206ENST00000397408 DDX60Q8IY21 1712 aaKnown RBP26.96■■□□□ 1.91
TSPAN4-206ENST00000397408 CACNA1SQ13698 1873 aa26.96■■□□□ 1.91
TSPAN4-206ENST00000397408 LINS1Q8NG48 757 aa26.96■■□□□ 1.91
TSPAN4-206ENST00000397408 CNKSR1Q969H4 720 aa26.96■■□□□ 1.91
TSPAN4-206ENST00000397408 PCCAP05165 728 aaPredicted RBP26.95■■□□□ 1.9
TSPAN4-206ENST00000397408 RPGRQ92834 1020 aaKnown RBP26.95■■□□□ 1.9
TSPAN4-206ENST00000397408 LAMB2P55268 1798 aa26.95■■□□□ 1.9
TSPAN4-206ENST00000397408 IRS4O14654 1257 aaPredicted RBP26.93■■□□□ 1.9
TSPAN4-206ENST00000397408 PRPF40BQ6NWY9 871 aaKnown RBP26.93■■□□□ 1.9
TSPAN4-206ENST00000397408 SLC4A10Q6U841 1118 aa26.93■■□□□ 1.9
TSPAN4-206ENST00000397408 JARID2Q92833 1246 aaPredicted RBP26.93■■□□□ 1.9
TSPAN4-206ENST00000397408 BEND3Q5T5X7 828 aa26.92■■□□□ 1.9
TSPAN4-206ENST00000397408 SLX4Q8IY92 1834 aa26.92■■□□□ 1.9
TSPAN4-206ENST00000397408 GCKRQ14397 625 aa26.91■■□□□ 1.9
TSPAN4-206ENST00000397408 BRPF1P55201 1214 aaPredicted RBP26.9■■□□□ 1.9
TSPAN4-206ENST00000397408 ZNF219Q9P2Y4 722 aaPredicted RBP26.9■■□□□ 1.9
TSPAN4-206ENST00000397408 HOXA10P31260 410 aaPredicted RBP26.9■■□□□ 1.9
TSPAN4-206ENST00000397408 RBM17Q96I25 401 aaKnown RBP26.9■■□□□ 1.9
TSPAN4-206ENST00000397408 NOB1Q9ULX3 412 aaKnown RBP26.9■■□□□ 1.9
TSPAN4-206ENST00000397408 KIF16BQ96L93 1317 aa26.89■■□□□ 1.89
TSPAN4-206ENST00000397408 CDHR2Q9BYE9 1310 aa26.89■■□□□ 1.89
TSPAN4-206ENST00000397408 HSP90B1P14625 803 aaKnown RBP26.89■■□□□ 1.89
TSPAN4-206ENST00000397408 ALDH1B1P30837 517 aa26.89■■□□□ 1.89
TSPAN4-206ENST00000397408 ARHGAP27Q6ZUM4 889 aa26.89■■□□□ 1.89
TSPAN4-206ENST00000397408 UBE3BQ7Z3V4 1068 aa26.89■■□□□ 1.89
TSPAN4-206ENST00000397408 YTHDC1Q96MU7 727 aaKnown RBP26.89■■□□□ 1.89
TSPAN4-206ENST00000397408 CHD4Q14839 1912 aa26.88■■□□□ 1.89
TSPAN4-206ENST00000397408 C21orf2O43822 256 aa26.88■■□□□ 1.89
TSPAN4-206ENST00000397408 SRCIN1Q9C0H9 1055 aa26.88■■□□□ 1.89
TSPAN4-206ENST00000397408 H7C1W4 665 aa26.87■■□□□ 1.89
TSPAN4-206ENST00000397408 CRAMP1Q96RY5 1269 aa26.87■■□□□ 1.89
TSPAN4-206ENST00000397408 BCAR3O75815 825 aa26.86■■□□□ 1.89
TSPAN4-206ENST00000397408 SF3B3Q15393 1217 aaKnown RBP26.86■■□□□ 1.89
TSPAN4-206ENST00000397408 ABCC4O15439 1325 aa26.85■■□□□ 1.89
TSPAN4-206ENST00000397408 PDE8AO60658 829 aa26.85■■□□□ 1.89
TSPAN4-206ENST00000397408 ALDH1L1O75891 902 aa26.85■■□□□ 1.89
TSPAN4-206ENST00000397408 DDX46Q7L014 1031 aaKnown RBP26.84■■□□□ 1.89
TSPAN4-206ENST00000397408 API5Q9BZZ5 524 aaKnown RBP26.84■■□□□ 1.89
TSPAN4-206ENST00000397408 CASP7P55210 303 aa26.83■■□□□ 1.89
TSPAN4-206ENST00000397408 C7orf43Q8WVR3 580 aa26.82■■□□□ 1.88
TSPAN4-206ENST00000397408 MYH3P11055 1940 aa26.82■■□□□ 1.88
TSPAN4-206ENST00000397408 GRM8O00222 908 aa26.82■■□□□ 1.88
TSPAN4-206ENST00000397408 PPEF1O14829 653 aaPredicted RBP26.82■■□□□ 1.88
TSPAN4-206ENST00000397408 RASSF7Q02833 373 aa26.82■■□□□ 1.88
TSPAN4-206ENST00000397408 SOGA3Q5TF21 947 aa26.82■■□□□ 1.88
TSPAN4-206ENST00000397408 CTSWP56202 376 aa26.81■■□□□ 1.88
TSPAN4-206ENST00000397408 GRAPQ13588 217 aa26.81■■□□□ 1.88
TSPAN4-206ENST00000397408 OLFM4Q6UX06 510 aa26.81■■□□□ 1.88
TSPAN4-206ENST00000397408 GRAPLQ8TC17 118 aaPredicted RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms