RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 PCCAP05165 728 aaPredicted RBP15.82■□□□□ 0.12
LMCD1-202ENST00000397386 UBE3BQ7Z3V4 1068 aa15.82■□□□□ 0.12
LMCD1-202ENST00000397386 ZBTB38Q8NAP3 1195 aaPredicted RBP15.82■□□□□ 0.12
LMCD1-202ENST00000397386 ARHGEF1Q92888 912 aaKnown RBP15.82■□□□□ 0.12
LMCD1-202ENST00000397386 RFC4P35249 363 aa15.81■□□□□ 0.12
LMCD1-202ENST00000397386 BAG6P46379 1132 aa15.81■□□□□ 0.12
LMCD1-202ENST00000397386 SSH3Q8TE77 659 aa15.81■□□□□ 0.12
LMCD1-202ENST00000397386 AKT1S1Q96B36 256 aa15.81■□□□□ 0.12
LMCD1-202ENST00000397386 DCTPP1Q9H773 170 aa15.81■□□□□ 0.12
LMCD1-202ENST00000397386 USP42Q9H9J4 1324 aaKnown RBP15.81■□□□□ 0.12
LMCD1-202ENST00000397386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.8■□□□□ 0.12
LMCD1-202ENST00000397386 RABL6Q3YEC7 729 aaPredicted RBP15.8■□□□□ 0.12
LMCD1-202ENST00000397386 FLAD1Q8NFF5 587 aa15.8■□□□□ 0.12
LMCD1-202ENST00000397386 KAZALD1Q96I82 304 aa15.8■□□□□ 0.12
LMCD1-202ENST00000397386 SUCLG2Q96I99 432 aa15.8■□□□□ 0.12
LMCD1-202ENST00000397386 CDHR2Q9BYE9 1310 aa15.8■□□□□ 0.12
LMCD1-202ENST00000397386 GPTP24298 496 aa15.79■□□□□ 0.12
LMCD1-202ENST00000397386 POLA2Q14181 598 aa15.79■□□□□ 0.12
LMCD1-202ENST00000397386 PPP1R42Q7Z4L9 355 aa15.79■□□□□ 0.12
LMCD1-202ENST00000397386 AMIGO3Q86WK7 504 aa15.79■□□□□ 0.12
LMCD1-202ENST00000397386 PLA2G12BQ9BX93 195 aa15.79■□□□□ 0.12
LMCD1-202ENST00000397386 UBN2Q6ZU65 1347 aa15.79■□□□□ 0.12
LMCD1-202ENST00000397386 C4AP0C0L4 1744 aa15.79■□□□□ 0.12
LMCD1-202ENST00000397386 PNMA6EA0A0J9YXQ4 647 aa15.78■□□□□ 0.12
LMCD1-202ENST00000397386 HSP90B1P14625 803 aaKnown RBP15.78■□□□□ 0.12
LMCD1-202ENST00000397386 USPL1Q5W0Q7 1092 aa15.78■□□□□ 0.12
LMCD1-202ENST00000397386 BICC1Q9H694 974 aaKnown RBP15.78■□□□□ 0.12
LMCD1-202ENST00000397386 BCL2L12Q9HB09 334 aa15.78■□□□□ 0.12
LMCD1-202ENST00000397386 NIP7Q9Y221 180 aaKnown RBP eCLIP15.78■□□□□ 0.12
LMCD1-202ENST00000397386 SRGAP3O43295 1099 aa15.78■□□□□ 0.12
LMCD1-202ENST00000397386 EN1Q05925 392 aaPredicted RBP15.78■□□□□ 0.12
LMCD1-202ENST00000397386 TRMT112Q9UI30 125 aaKnown RBP15.78■□□□□ 0.12
LMCD1-202ENST00000397386 PHF14O94880 888 aa15.77■□□□□ 0.11
LMCD1-202ENST00000397386 UTP14AQ9BVJ6 771 aaKnown RBP15.77■□□□□ 0.11
LMCD1-202ENST00000397386 TFCP2L1Q9NZI6 479 aa15.77■□□□□ 0.11
LMCD1-202ENST00000397386 SH3TC1Q8TE82 1336 aa15.76■□□□□ 0.11
LMCD1-202ENST00000397386 FOXO4P98177 505 aa15.76■□□□□ 0.11
LMCD1-202ENST00000397386 EZH2Q15910 746 aaKnown RBP15.76■□□□□ 0.11
LMCD1-202ENST00000397386 ZNF827Q17R98 1081 aa15.76■□□□□ 0.11
LMCD1-202ENST00000397386 PELP1Q8IZL8 1130 aaKnown RBP15.76■□□□□ 0.11
LMCD1-202ENST00000397386 SRP68Q9UHB9 627 aaKnown RBP15.76■□□□□ 0.11
LMCD1-202ENST00000397386 NUCB1Q02818 461 aa15.75■□□□□ 0.11
LMCD1-202ENST00000397386 EPHA10Q5JZY3 1008 aa15.75■□□□□ 0.11
LMCD1-202ENST00000397386 SUSD4Q5VX71 490 aa15.75■□□□□ 0.11
LMCD1-202ENST00000397386 FAM89AQ96GI7 184 aa15.75■□□□□ 0.11
LMCD1-202ENST00000397386 SETDB2Q96T68 719 aa15.75■□□□□ 0.11
LMCD1-202ENST00000397386 NOP58Q9Y2X3 529 aaKnown RBP15.75■□□□□ 0.11
LMCD1-202ENST00000397386 NTSR2O95665 410 aa15.74■□□□□ 0.11
LMCD1-202ENST00000397386 HSP90AB4PQ58FF6 505 aa15.74■□□□□ 0.11
LMCD1-202ENST00000397386 TBC1D9BQ66K14 1250 aa15.74■□□□□ 0.11
LMCD1-202ENST00000397386 SMIM5Q71RC9 77 aa15.74■□□□□ 0.11
LMCD1-202ENST00000397386 NYXQ9GZU5 481 aa15.74■□□□□ 0.11
LMCD1-202ENST00000397386 IRS4O14654 1257 aaPredicted RBP15.73■□□□□ 0.11
LMCD1-202ENST00000397386 CSF1RP07333 972 aa15.73■□□□□ 0.11
LMCD1-202ENST00000397386 JARID2Q92833 1246 aaPredicted RBP15.73■□□□□ 0.11
LMCD1-202ENST00000397386 PDZRN3Q9UPQ7 1066 aa15.73■□□□□ 0.11
LMCD1-202ENST00000397386 COL24A1Q17RW2 1714 aa15.73■□□□□ 0.11
LMCD1-202ENST00000397386 PDE8AO60658 829 aa15.73■□□□□ 0.11
LMCD1-202ENST00000397386 RAB11FIP3O75154 756 aa15.73■□□□□ 0.11
LMCD1-202ENST00000397386 GYS1P13807 737 aa15.73■□□□□ 0.11
LMCD1-202ENST00000397386 SLC15A2Q16348 729 aa15.73■□□□□ 0.11
LMCD1-202ENST00000397386 RTL5Q5HYW3 569 aaPredicted RBP15.73■□□□□ 0.11
LMCD1-202ENST00000397386 LMBR1LQ6UX01 489 aa15.73■□□□□ 0.11
LMCD1-202ENST00000397386 CARMIL3Q8ND23 1372 aa15.72■□□□□ 0.11
LMCD1-202ENST00000397386 CHD1LQ86WJ1 897 aa15.72■□□□□ 0.11
LMCD1-202ENST00000397386 COPRSQ9NQ92 184 aa15.72■□□□□ 0.11
LMCD1-202ENST00000397386 STK32BQ9NY57 414 aa15.72■□□□□ 0.11
LMCD1-202ENST00000397386 QSER1Q2KHR3 1735 aa15.71■□□□□ 0.11
LMCD1-202ENST00000397386 PNPLA7Q6ZV29 1317 aa15.71■□□□□ 0.11
LMCD1-202ENST00000397386 SURF6O75683 361 aaKnown RBP15.71■□□□□ 0.11
LMCD1-202ENST00000397386 SLC10A5Q5PT55 438 aa15.71■□□□□ 0.11
LMCD1-202ENST00000397386 ANKRD45Q5TZF3 282 aa15.71■□□□□ 0.11
LMCD1-202ENST00000397386 TPTE2Q6XPS3 522 aa15.71■□□□□ 0.11
LMCD1-202ENST00000397386 DEFB132Q7Z7B7 95 aa15.71■□□□□ 0.11
LMCD1-202ENST00000397386 NLGN1Q8N2Q7 840 aa15.71■□□□□ 0.11
LMCD1-202ENST00000397386 ZBTB47Q9UFB7 747 aaPredicted RBP15.71■□□□□ 0.11
LMCD1-202ENST00000397386 TM4SF1P30408 202 aa15.7■□□□□ 0.1
LMCD1-202ENST00000397386 RFX5P48382 616 aaPredicted RBP15.7■□□□□ 0.1
LMCD1-202ENST00000397386 CTSWP56202 376 aa15.7■□□□□ 0.1
LMCD1-202ENST00000397386 NFIXQ14938 502 aa15.7■□□□□ 0.1
LMCD1-202ENST00000397386 NBPF5PQ86XG9 351 aaPredicted RBP15.7■□□□□ 0.1
LMCD1-202ENST00000397386 COL23A1Q86Y22 540 aaPredicted RBP15.7■□□□□ 0.1
LMCD1-202ENST00000397386 ERC1Q8IUD2 1116 aa15.7■□□□□ 0.1
LMCD1-202ENST00000397386 TTLL11Q8NHH1 800 aa15.7■□□□□ 0.1
LMCD1-202ENST00000397386 EXOC6BQ9Y2D4 811 aa15.7■□□□□ 0.1
LMCD1-202ENST00000397386 TUBGCP6Q96RT7 1819 aa15.7■□□□□ 0.1
LMCD1-202ENST00000397386 LAMB2P55268 1798 aa15.7■□□□□ 0.1
LMCD1-202ENST00000397386 MYH3P11055 1940 aa15.69■□□□□ 0.1
LMCD1-202ENST00000397386 BICDL1Q6ZP65 573 aa15.69■□□□□ 0.1
LMCD1-202ENST00000397386 SYNE4Q8N205 404 aa15.69■□□□□ 0.1
LMCD1-202ENST00000397386 LRRCC1Q9C099 1032 aa15.69■□□□□ 0.1
LMCD1-202ENST00000397386 FBXO3Q9UK99 471 aa15.69■□□□□ 0.1
LMCD1-202ENST00000397386 PTPN12Q05209 780 aaKnown RBP15.68■□□□□ 0.1
LMCD1-202ENST00000397386 CCDC57Q2TAC2 916 aa15.68■□□□□ 0.1
LMCD1-202ENST00000397386 KIF1BPQ96EK5 621 aa15.68■□□□□ 0.1
LMCD1-202ENST00000397386 ANO8Q9HCE9 1232 aaPredicted RBP15.68■□□□□ 0.1
LMCD1-202ENST00000397386 RTL9Q8NET4 1388 aa15.68■□□□□ 0.1
LMCD1-202ENST00000397386 RIC1Q4ADV7 1423 aa15.68■□□□□ 0.1
LMCD1-202ENST00000397386 G3BP1Q13283 466 aaKnown RBP eCLIP15.68■□□□□ 0.1
LMCD1-202ENST00000397386 DDX60Q8IY21 1712 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms