RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ABCC12Q96J65 1359 aa20.02■□□□□ 0.8
SEC13-206ENST00000397102 GRIPAP1Q4V328 841 aa20.01■□□□□ 0.79
SEC13-206ENST00000397102 MCM10Q7L590 875 aa20.01■□□□□ 0.79
SEC13-206ENST00000397102 BEGAINQ9BUH8 593 aa20.01■□□□□ 0.79
SEC13-206ENST00000397102 RIC1Q4ADV7 1423 aa20.01■□□□□ 0.79
SEC13-206ENST00000397102 SCNN1DP51172 638 aa20■□□□□ 0.79
SEC13-206ENST00000397102 CNGB1Q14028 1251 aaPredicted RBP20■□□□□ 0.79
SEC13-206ENST00000397102 CFAP53Q96M91 514 aa20■□□□□ 0.79
SEC13-206ENST00000397102 EPS15P42566 896 aa19.99■□□□□ 0.79
SEC13-206ENST00000397102 FMR1Q06787 632 aaKnown RBP eCLIP19.99■□□□□ 0.79
SEC13-206ENST00000397102 PAXIP1Q6ZW49 1069 aaPredicted RBP19.99■□□□□ 0.79
SEC13-206ENST00000397102 USP50Q70EL3 339 aaPredicted RBP19.99■□□□□ 0.79
SEC13-206ENST00000397102 HOXA10P31260 410 aaPredicted RBP19.98■□□□□ 0.79
SEC13-206ENST00000397102 CYP4F22Q6NT55 531 aa19.98■□□□□ 0.79
SEC13-206ENST00000397102 NUTM1Q86Y26 1132 aa19.98■□□□□ 0.79
SEC13-206ENST00000397102 LARGE2Q8N3Y3 721 aa19.98■□□□□ 0.79
SEC13-206ENST00000397102 RPGRQ92834 1020 aaKnown RBP19.98■□□□□ 0.79
SEC13-206ENST00000397102 GPR101Q96P66 508 aaPredicted RBP19.98■□□□□ 0.79
SEC13-206ENST00000397102 NUDCQ9Y266 331 aa19.98■□□□□ 0.79
SEC13-206ENST00000397102 IBTKQ9P2D0 1353 aaPredicted RBP19.97■□□□□ 0.79
SEC13-206ENST00000397102 ERVV-1B6SEH8 477 aa19.97■□□□□ 0.79
SEC13-206ENST00000397102 HTATSF1O43719 755 aaKnown RBP19.97■□□□□ 0.79
SEC13-206ENST00000397102 CST9Q5W186 159 aa19.97■□□□□ 0.79
SEC13-206ENST00000397102 TLL2Q9Y6L7 1015 aa19.97■□□□□ 0.79
SEC13-206ENST00000397102 CCDC85CA6NKD9 419 aa19.96■□□□□ 0.79
SEC13-206ENST00000397102 RGS19P49795 217 aa19.96■□□□□ 0.79
SEC13-206ENST00000397102 MLLT1Q03111 559 aaPredicted RBP19.96■□□□□ 0.79
SEC13-206ENST00000397102 GRM1Q13255 1194 aa19.96■□□□□ 0.79
SEC13-206ENST00000397102 DCTN1Q14203 1278 aa19.96■□□□□ 0.79
SEC13-206ENST00000397102 KDM3BQ7LBC6 1761 aa19.95■□□□□ 0.78
SEC13-206ENST00000397102 MAP2K2P36507 400 aa19.95■□□□□ 0.78
SEC13-206ENST00000397102 TAF7Q15545 349 aaPredicted RBP19.95■□□□□ 0.78
SEC13-206ENST00000397102 NIM1KQ8IY84 436 aa19.95■□□□□ 0.78
SEC13-206ENST00000397102 CRAMP1Q96RY5 1269 aa19.95■□□□□ 0.78
SEC13-206ENST00000397102 MAP3K15Q6ZN16 1313 aa19.95■□□□□ 0.78
SEC13-206ENST00000397102 TRAF5O00463 557 aa19.94■□□□□ 0.78
SEC13-206ENST00000397102 U2AF1L5P0DN76 240 aaPredicted RBP19.94■□□□□ 0.78
SEC13-206ENST00000397102 U2AF1Q01081 240 aaKnown RBP eCLIP19.94■□□□□ 0.78
SEC13-206ENST00000397102 RBM17Q96I25 401 aaKnown RBP19.94■□□□□ 0.78
SEC13-206ENST00000397102 PPEF1O14829 653 aaPredicted RBP19.93■□□□□ 0.78
SEC13-206ENST00000397102 NGEFQ8N5V2 710 aa19.93■□□□□ 0.78
SEC13-206ENST00000397102 ADARB2Q9NS39 739 aaKnown RBP19.93■□□□□ 0.78
SEC13-206ENST00000397102 UBN2Q6ZU65 1347 aa19.93■□□□□ 0.78
SEC13-206ENST00000397102 KIF6Q6ZMV9 814 aa19.92■□□□□ 0.78
SEC13-206ENST00000397102 CCER1Q8TC90 406 aaPredicted RBP19.92■□□□□ 0.78
SEC13-206ENST00000397102 GPRC5DQ9NZD1 345 aa19.92■□□□□ 0.78
SEC13-206ENST00000397102 DLG5Q8TDM6 1919 aa19.92■□□□□ 0.78
SEC13-206ENST00000397102 PPIP5K2O43314 1243 aa19.91■□□□□ 0.78
SEC13-206ENST00000397102 CA12O43570 354 aa19.91■□□□□ 0.78
SEC13-206ENST00000397102 AOC2O75106 756 aa19.91■□□□□ 0.78
SEC13-206ENST00000397102 GPTP24298 496 aa19.91■□□□□ 0.78
SEC13-206ENST00000397102 SUSD4Q5VX71 490 aa19.91■□□□□ 0.78
SEC13-206ENST00000397102 VPS33BQ9H267 617 aa19.91■□□□□ 0.78
SEC13-206ENST00000397102 TSKSQ9UJT2 592 aa19.91■□□□□ 0.78
SEC13-206ENST00000397102 TTLL7Q6ZT98 887 aa19.9■□□□□ 0.78
SEC13-206ENST00000397102 SAPCD2Q86UD0 394 aa19.9■□□□□ 0.78
SEC13-206ENST00000397102 SLC51AQ86UW1 340 aa19.9■□□□□ 0.78
SEC13-206ENST00000397102 PNISRQ8TF01 805 aaKnown RBP19.9■□□□□ 0.78
SEC13-206ENST00000397102 HHIPL1Q96JK4 782 aa19.9■□□□□ 0.78
SEC13-206ENST00000397102 MIS18AQ9NYP9 233 aa19.9■□□□□ 0.78
SEC13-206ENST00000397102 TCERG1O14776 1098 aaKnown RBP19.89■□□□□ 0.77
SEC13-206ENST00000397102 NTSR2O95665 410 aa19.89■□□□□ 0.77
SEC13-206ENST00000397102 AOC3Q16853 763 aa19.89■□□□□ 0.77
SEC13-206ENST00000397102 ZNF34Q8IZ26 560 aa19.89■□□□□ 0.77
SEC13-206ENST00000397102 TMX4Q9H1E5 349 aaPredicted RBP19.89■□□□□ 0.77
SEC13-206ENST00000397102 ZBTB3Q9H5J0 574 aa19.89■□□□□ 0.77
SEC13-206ENST00000397102 RRP7AQ9Y3A4 280 aaKnown RBP19.89■□□□□ 0.77
SEC13-206ENST00000397102 CASP8AP2Q9UKL3 1982 aa19.88■□□□□ 0.77
SEC13-206ENST00000397102 CELF2O95319 508 aaKnown RBP19.88■□□□□ 0.77
SEC13-206ENST00000397102 CDHR2Q9BYE9 1310 aa19.87■□□□□ 0.77
SEC13-206ENST00000397102 BRPF1P55201 1214 aaPredicted RBP19.87■□□□□ 0.77
SEC13-206ENST00000397102 CXCL9Q07325 125 aa19.87■□□□□ 0.77
SEC13-206ENST00000397102 C3orf67Q6ZVT6 689 aa19.87■□□□□ 0.77
SEC13-206ENST00000397102 SUPT20HQ8NEM7 779 aa19.87■□□□□ 0.77
SEC13-206ENST00000397102 MCOLN1Q9GZU1 580 aa19.87■□□□□ 0.77
SEC13-206ENST00000397102 PGAP2Q9UHJ9 254 aa19.87■□□□□ 0.77
SEC13-206ENST00000397102 ZNRF3Q9ULT6 936 aa19.87■□□□□ 0.77
SEC13-206ENST00000397102 ATP6V0A2Q9Y487 856 aa19.87■□□□□ 0.77
SEC13-206ENST00000397102 MYL6BP14649 208 aa19.86■□□□□ 0.77
SEC13-206ENST00000397102 PPP2R1AP30153 589 aa19.86■□□□□ 0.77
SEC13-206ENST00000397102 EIF4A1P60842 406 aaKnown RBP19.86■□□□□ 0.77
SEC13-206ENST00000397102 GIGYF2Q6Y7W6 1299 aaKnown RBP19.86■□□□□ 0.77
SEC13-206ENST00000397102 PPP1R42Q7Z4L9 355 aa19.86■□□□□ 0.77
SEC13-206ENST00000397102 NLRP3Q96P20 1036 aa19.86■□□□□ 0.77
SEC13-206ENST00000397102 RTFDC1Q9BY42 306 aaPredicted RBP19.86■□□□□ 0.77
SEC13-206ENST00000397102 GLIS2Q9BZE0 524 aaPredicted RBP19.86■□□□□ 0.77
SEC13-206ENST00000397102 GMPSP49915 693 aaPredicted RBP19.85■□□□□ 0.77
SEC13-206ENST00000397102 PARP10Q53GL7 1025 aa19.85■□□□□ 0.77
SEC13-206ENST00000397102 LAMB2P55268 1798 aa19.85■□□□□ 0.77
SEC13-206ENST00000397102 ERBB4Q15303 1308 aa19.84■□□□□ 0.77
SEC13-206ENST00000397102 ZC3H15Q8WU90 426 aaKnown RBP19.84■□□□□ 0.77
SEC13-206ENST00000397102 PCDH10Q9P2E7 1040 aa19.84■□□□□ 0.77
SEC13-206ENST00000397102 ANKRD36CQ5JPF3 1778 aa19.84■□□□□ 0.77
SEC13-206ENST00000397102 ABCC4O15439 1325 aa19.83■□□□□ 0.77
SEC13-206ENST00000397102 SLC10A5Q5PT55 438 aa19.83■□□□□ 0.77
SEC13-206ENST00000397102 CIAPIN1Q6FI81 312 aa19.83■□□□□ 0.77
SEC13-206ENST00000397102 CFAP44Q96MT7 982 aa19.83■□□□□ 0.77
SEC13-206ENST00000397102 NEFMP07197 916 aa19.82■□□□□ 0.76
SEC13-206ENST00000397102 CDC37L1Q7L3B6 337 aa19.82■□□□□ 0.76
SEC13-206ENST00000397102 ZNF408Q9H9D4 720 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms