RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 SMC1AQ14683 1233 aaKnown RBP20.11■□□□□ 0.81
MCF2L-208ENST00000397030 DBF4Q9UBU7 674 aaPredicted RBP20.11■□□□□ 0.81
MCF2L-208ENST00000397030 RPAP2Q8IXW5 612 aaPredicted RBP20.11■□□□□ 0.81
MCF2L-208ENST00000397030 NOD1Q9Y239 953 aa20.11■□□□□ 0.81
MCF2L-208ENST00000397030 TCHPQ9BT92 498 aa20.1■□□□□ 0.81
MCF2L-208ENST00000397030 GJC1P36383 396 aa20.1■□□□□ 0.81
MCF2L-208ENST00000397030 NCBP1Q09161 790 aaKnown RBP20.1■□□□□ 0.81
MCF2L-208ENST00000397030 SMARCC2Q8TAQ2 1214 aa20.1■□□□□ 0.81
MCF2L-208ENST00000397030 EIF3JO75822 258 aaKnown RBP20.1■□□□□ 0.81
MCF2L-208ENST00000397030 NLRP3Q96P20 1036 aa20.1■□□□□ 0.81
MCF2L-208ENST00000397030 FERMT1Q9BQL6 677 aa20.1■□□□□ 0.81
MCF2L-208ENST00000397030 WASLO00401 505 aaPredicted RBP20.1■□□□□ 0.81
MCF2L-208ENST00000397030 HSPA2P54652 639 aa20.1■□□□□ 0.81
MCF2L-208ENST00000397030 PROCA1Q8NCQ7 364 aaPredicted RBP20.1■□□□□ 0.81
MCF2L-208ENST00000397030 KIAA1107Q9UPP5 1409 aa20.1■□□□□ 0.81
MCF2L-208ENST00000397030 NOP2P46087 812 aaKnown RBP20.09■□□□□ 0.81
MCF2L-208ENST00000397030 RTCBQ9Y3I0 505 aaKnown RBP20.09■□□□□ 0.81
MCF2L-208ENST00000397030 SLC4A4Q9Y6R1 1079 aa20.09■□□□□ 0.81
MCF2L-208ENST00000397030 EAPPQ56P03 285 aaPredicted RBP20.09■□□□□ 0.81
MCF2L-208ENST00000397030 MAP3K11Q16584 847 aa20.09■□□□□ 0.81
MCF2L-208ENST00000397030 CASQ1P31415 396 aa20.09■□□□□ 0.81
MCF2L-208ENST00000397030 LMTK3Q96Q04 1460 aa20.08■□□□□ 0.81
MCF2L-208ENST00000397030 STX6O43752 255 aa20.08■□□□□ 0.81
MCF2L-208ENST00000397030 AMPD3Q01432 767 aa20.08■□□□□ 0.8
MCF2L-208ENST00000397030 CEP63Q96MT8 703 aa20.08■□□□□ 0.8
MCF2L-208ENST00000397030 SLC39A6Q13433 755 aa20.08■□□□□ 0.8
MCF2L-208ENST00000397030 PKD2L1Q9P0L9 805 aa20.08■□□□□ 0.8
MCF2L-208ENST00000397030 GIGYF2Q6Y7W6 1299 aaKnown RBP20.07■□□□□ 0.8
MCF2L-208ENST00000397030 BIN1O00499 593 aa20.07■□□□□ 0.8
MCF2L-208ENST00000397030 METAP2P50579 478 aaKnown RBP eCLIP20.07■□□□□ 0.8
MCF2L-208ENST00000397030 FERP16591 822 aa20.07■□□□□ 0.8
MCF2L-208ENST00000397030 STK32BQ9NY57 414 aa20.07■□□□□ 0.8
MCF2L-208ENST00000397030 SIRT1Q96EB6 747 aa20.06■□□□□ 0.8
MCF2L-208ENST00000397030 MRVI1Q9Y6F6 885 aa20.06■□□□□ 0.8
MCF2L-208ENST00000397030 USP16Q9Y5T5 823 aa20.06■□□□□ 0.8
MCF2L-208ENST00000397030 IFIT1BQ5T764 474 aaKnown RBP20.06■□□□□ 0.8
MCF2L-208ENST00000397030 NSFL1CQ9UNZ2 370 aaKnown RBP20.06■□□□□ 0.8
MCF2L-208ENST00000397030 SNRPA1P09661 255 aaKnown RBP20.06■□□□□ 0.8
MCF2L-208ENST00000397030 ZC3H12CQ9C0D7 883 aaKnown RBP20.06■□□□□ 0.8
MCF2L-208ENST00000397030 ERICH3Q5RHP9 1530 aa20.06■□□□□ 0.8
MCF2L-208ENST00000397030 TSHZ3Q63HK5 1081 aa20.05■□□□□ 0.8
MCF2L-208ENST00000397030 IARSP41252 1262 aaKnown RBP20.05■□□□□ 0.8
MCF2L-208ENST00000397030 HMGB1P09429 215 aaKnown RBP20.05■□□□□ 0.8
MCF2L-208ENST00000397030 TOP1P11387 765 aaKnown RBP20.04■□□□□ 0.8
MCF2L-208ENST00000397030 AKNAQ7Z591 1439 aa20.04■□□□□ 0.8
MCF2L-208ENST00000397030 EXOC1Q9NV70 894 aa20.04■□□□□ 0.8
MCF2L-208ENST00000397030 HECW1Q76N89 1606 aa20.03■□□□□ 0.8
MCF2L-208ENST00000397030 TMEM110-MUSTN1A8MSY1 372 aa20.03■□□□□ 0.8
MCF2L-208ENST00000397030 KIF5CO60282 957 aa20.03■□□□□ 0.8
MCF2L-208ENST00000397030 UBA7P41226 1012 aa20.03■□□□□ 0.8
MCF2L-208ENST00000397030 ACTN2P35609 894 aa20.03■□□□□ 0.8
MCF2L-208ENST00000397030 NAA16Q6N069 864 aaPredicted RBP20.03■□□□□ 0.8
MCF2L-208ENST00000397030 CIZ1Q9ULV3 898 aaPredicted RBP20.03■□□□□ 0.8
MCF2L-208ENST00000397030 ARHGEF11O15085 1522 aa20.03■□□□□ 0.8
MCF2L-208ENST00000397030 SYCE3A1L190 88 aa20.03■□□□□ 0.8
MCF2L-208ENST00000397030 FAM83GA6ND36 823 aa20.03■□□□□ 0.8
MCF2L-208ENST00000397030 DZIP3Q86Y13 1208 aaKnown RBP20.03■□□□□ 0.8
MCF2L-208ENST00000397030 ZGPATQ8N5A5 531 aaKnown RBP20.03■□□□□ 0.8
MCF2L-208ENST00000397030 ERMNQ8TAM6 284 aa20.03■□□□□ 0.8
MCF2L-208ENST00000397030 LRRC45Q96CN5 670 aa20.03■□□□□ 0.8
MCF2L-208ENST00000397030 NYXQ9GZU5 481 aa20.03■□□□□ 0.8
MCF2L-208ENST00000397030 ADGRL1O94910 1474 aa20.03■□□□□ 0.8
MCF2L-208ENST00000397030 GNPATO15228 680 aa20.02■□□□□ 0.8
MCF2L-208ENST00000397030 SPOUT1Q5T280 376 aaKnown RBP20.02■□□□□ 0.8
MCF2L-208ENST00000397030 GCOM1H8Y6P7 765 aaPredicted RBP20.02■□□□□ 0.8
MCF2L-208ENST00000397030 MYZAPP0CAP1 466 aa20.02■□□□□ 0.8
MCF2L-208ENST00000397030 NCKAP5LQ9HCH0 1330 aa20.02■□□□□ 0.8
MCF2L-208ENST00000397030 USO1O60763 962 aaKnown RBP20.02■□□□□ 0.8
MCF2L-208ENST00000397030 GPR162Q16538 588 aa20.02■□□□□ 0.8
MCF2L-208ENST00000397030 YEATS4O95619 227 aa20.02■□□□□ 0.79
MCF2L-208ENST00000397030 KIF4BQ2VIQ3 1234 aa20.02■□□□□ 0.79
MCF2L-208ENST00000397030 DDX23Q9BUQ8 820 aaKnown RBP20.02■□□□□ 0.79
MCF2L-208ENST00000397030 FLIIQ13045 1269 aa20.01■□□□□ 0.79
MCF2L-208ENST00000397030 CCDC117Q8IWD4 279 aaPredicted RBP20.01■□□□□ 0.79
MCF2L-208ENST00000397030 PPP1R14CQ8TAE6 165 aa20.01■□□□□ 0.79
MCF2L-208ENST00000397030 CRACR2AQ9BSW2 395 aa20.01■□□□□ 0.79
MCF2L-208ENST00000397030 WTAPQ15007 396 aa20.01■□□□□ 0.79
MCF2L-208ENST00000397030 SMARCC1Q92922 1105 aaPredicted RBP20.01■□□□□ 0.79
MCF2L-208ENST00000397030 ACEP12821 1306 aa20.01■□□□□ 0.79
MCF2L-208ENST00000397030 NAPAP54920 295 aa20.01■□□□□ 0.79
MCF2L-208ENST00000397030 TBC1D5Q92609 795 aa20.01■□□□□ 0.79
MCF2L-208ENST00000397030 SAP30BPQ9UHR5 308 aaKnown RBP20.01■□□□□ 0.79
MCF2L-208ENST00000397030 HLTFQ14527 1009 aaKnown RBP eCLIP20.01■□□□□ 0.79
MCF2L-208ENST00000397030 RAB3GAP1Q15042 981 aa20.01■□□□□ 0.79
MCF2L-208ENST00000397030 FSIP1Q8NA03 581 aa20.01■□□□□ 0.79
MCF2L-208ENST00000397030 PI4KAP2A4QPH2 592 aa20■□□□□ 0.79
MCF2L-208ENST00000397030 PI4KAP1Q8N8J0 262 aa20■□□□□ 0.79
MCF2L-208ENST00000397030 EHBP1L1Q8N3D4 1523 aa20■□□□□ 0.79
MCF2L-208ENST00000397030 FBLN1P23142 703 aa20■□□□□ 0.79
MCF2L-208ENST00000397030 PICK1Q9NRD5 415 aa20■□□□□ 0.79
MCF2L-208ENST00000397030 NCOA7Q8NI08 942 aa20■□□□□ 0.79
MCF2L-208ENST00000397030 B4DLN1 442 aa20■□□□□ 0.79
MCF2L-208ENST00000397030 UQCRFS1P1P0C7P4 283 aa20■□□□□ 0.79
MCF2L-208ENST00000397030 MRPL12P52815 198 aaKnown RBP20■□□□□ 0.79
MCF2L-208ENST00000397030 BACH1O14867 736 aa20■□□□□ 0.79
MCF2L-208ENST00000397030 RBM17Q96I25 401 aaKnown RBP20■□□□□ 0.79
MCF2L-208ENST00000397030 SBNO2Q9Y2G9 1366 aa19.99■□□□□ 0.79
MCF2L-208ENST00000397030 SH3BP5O60239 455 aa19.99■□□□□ 0.79
MCF2L-208ENST00000397030 CBX1P83916 185 aa19.99■□□□□ 0.79
MCF2L-208ENST00000397030 ANKRD13DQ6ZTN6 518 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms