RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 NRBP1Q9UHY1 535 aa28.46■■■□□ 2.15
CSNK1E-203ENST00000396832 GABPB1Q06547 395 aaPredicted RBP28.46■■■□□ 2.15
CSNK1E-203ENST00000396832 SIL1Q9H173 461 aa28.46■■■□□ 2.15
CSNK1E-203ENST00000396832 CYP46A1Q9Y6A2 500 aa28.46■■■□□ 2.15
CSNK1E-203ENST00000396832 MRVI1Q9Y6F6 885 aa28.46■■■□□ 2.15
CSNK1E-203ENST00000396832 AACSQ86V21 672 aa28.45■■■□□ 2.15
CSNK1E-203ENST00000396832 DDX41Q9UJV9 622 aaKnown RBP28.45■■■□□ 2.15
CSNK1E-203ENST00000396832 TPCN1Q9ULQ1 816 aa28.45■■■□□ 2.15
CSNK1E-203ENST00000396832 PRAMEF22A3QJZ6 481 aa28.45■■■□□ 2.14
CSNK1E-203ENST00000396832 IFIT2P09913 472 aaKnown RBP28.45■■■□□ 2.14
CSNK1E-203ENST00000396832 MPRIPQ6WCQ1 1025 aa28.45■■■□□ 2.14
CSNK1E-203ENST00000396832 CCDC8Q9H0W5 538 aaPredicted RBP28.45■■■□□ 2.14
CSNK1E-203ENST00000396832 C9orf78Q9NZ63 289 aaPredicted RBP28.45■■■□□ 2.14
CSNK1E-203ENST00000396832 TFIP11Q9UBB9 837 aaKnown RBP28.45■■■□□ 2.14
CSNK1E-203ENST00000396832 GLRX3O76003 335 aaKnown RBP28.45■■■□□ 2.14
CSNK1E-203ENST00000396832 TYRO3Q06418 890 aa28.45■■■□□ 2.14
CSNK1E-203ENST00000396832 MAP3K11Q16584 847 aa28.45■■■□□ 2.14
CSNK1E-203ENST00000396832 PROSER3Q2NL68 480 aa28.45■■■□□ 2.14
CSNK1E-203ENST00000396832 LIG1P18858 919 aa28.44■■■□□ 2.14
CSNK1E-203ENST00000396832 HTATSF1O43719 755 aaKnown RBP28.44■■■□□ 2.14
CSNK1E-203ENST00000396832 TTC6Q86TZ1 520 aa28.44■■■□□ 2.14
CSNK1E-203ENST00000396832 LARP1BQ659C4 914 aaKnown RBP28.43■■■□□ 2.14
CSNK1E-203ENST00000396832 RBM8AQ9Y5S9 174 aaKnown RBP28.43■■■□□ 2.14
CSNK1E-203ENST00000396832 PIK3C2AO00443 1686 aa28.43■■■□□ 2.14
CSNK1E-203ENST00000396832 EIF4A1P60842 406 aaKnown RBP28.43■■■□□ 2.14
CSNK1E-203ENST00000396832 CCDC112Q8NEF3 446 aa28.43■■■□□ 2.14
CSNK1E-203ENST00000396832 NUP62CLQ9H1M0 184 aa28.43■■■□□ 2.14
CSNK1E-203ENST00000396832 TLR7Q9NYK1 1049 aaKnown RBP28.42■■■□□ 2.14
CSNK1E-203ENST00000396832 PAXBP1Q9Y5B6 917 aa28.42■■■□□ 2.14
CSNK1E-203ENST00000396832 ZSCAN25Q6NSZ9 544 aa28.42■■■□□ 2.14
CSNK1E-203ENST00000396832 KLHDC4Q8TBB5 520 aa28.42■■■□□ 2.14
CSNK1E-203ENST00000396832 LRRC37A3O60309 1634 aa28.41■■■□□ 2.14
CSNK1E-203ENST00000396832 SLFN14P0C7P3 912 aa28.41■■■□□ 2.14
CSNK1E-203ENST00000396832 LRRC59Q96AG4 307 aaKnown RBP28.41■■■□□ 2.14
CSNK1E-203ENST00000396832 MAP3K2Q9Y2U5 619 aa28.41■■■□□ 2.14
CSNK1E-203ENST00000396832 AIMP1Q12904 312 aaKnown RBP28.41■■■□□ 2.14
CSNK1E-203ENST00000396832 TRIM5Q9C035 493 aa28.41■■■□□ 2.14
CSNK1E-203ENST00000396832 CBX8Q9HC52 389 aa28.41■■■□□ 2.14
CSNK1E-203ENST00000396832 ECHDC1Q9NTX5 307 aa28.41■■■□□ 2.14
CSNK1E-203ENST00000396832 GTF2E1P29083 439 aaPredicted RBP28.4■■■□□ 2.14
CSNK1E-203ENST00000396832 MORC2Q9Y6X9 1032 aaPredicted RBP28.4■■■□□ 2.14
CSNK1E-203ENST00000396832 NMIQ13287 307 aaPredicted RBP28.4■■■□□ 2.14
CSNK1E-203ENST00000396832 ADCY9O60503 1353 aa28.4■■■□□ 2.14
CSNK1E-203ENST00000396832 CACNA1FO60840 1977 aa28.39■■■□□ 2.14
CSNK1E-203ENST00000396832 VPS53Q5VIR6 699 aa28.39■■■□□ 2.14
CSNK1E-203ENST00000396832 RUFY2Q8WXA3 655 aa28.39■■■□□ 2.14
CSNK1E-203ENST00000396832 BOLA2Q9H3K6 86 aa28.39■■■□□ 2.14
CSNK1E-203ENST00000396832 PXDNLA1KZ92 1463 aa28.39■■■□□ 2.14
CSNK1E-203ENST00000396832 TPD52L1Q16890 204 aaPredicted RBP28.39■■■□□ 2.14
CSNK1E-203ENST00000396832 ANO6Q4KMQ2 910 aa28.39■■■□□ 2.14
CSNK1E-203ENST00000396832 NBPF6Q5VWK0 638 aa28.39■■■□□ 2.14
CSNK1E-203ENST00000396832 CREB3L3Q68CJ9 461 aa28.39■■■□□ 2.14
CSNK1E-203ENST00000396832 EDC3Q96F86 508 aaKnown RBP28.39■■■□□ 2.14
CSNK1E-203ENST00000396832 NBPF4Q96M43 638 aa28.39■■■□□ 2.14
CSNK1E-203ENST00000396832 FOSBP53539 338 aa28.39■■■□□ 2.13
CSNK1E-203ENST00000396832 TEFQ10587 303 aa28.39■■■□□ 2.13
CSNK1E-203ENST00000396832 KIF18AQ8NI77 898 aa28.39■■■□□ 2.13
CSNK1E-203ENST00000396832 NDUFB9Q9Y6M9 179 aa28.39■■■□□ 2.13
CSNK1E-203ENST00000396832 CCDC171Q6TFL3 1326 aa28.38■■■□□ 2.13
CSNK1E-203ENST00000396832 UBR1Q8IWV7 1749 aa28.38■■■□□ 2.13
CSNK1E-203ENST00000396832 BTBD11A6QL63 1104 aa28.38■■■□□ 2.13
CSNK1E-203ENST00000396832 ZKSCAN1P17029 563 aaPredicted RBP28.38■■■□□ 2.13
CSNK1E-203ENST00000396832 ZNF75DP51815 510 aa28.38■■■□□ 2.13
CSNK1E-203ENST00000396832 ZSWIM6Q9HCJ5 1215 aa28.38■■■□□ 2.13
CSNK1E-203ENST00000396832 NWD1Q149M9 1564 aa28.37■■■□□ 2.13
CSNK1E-203ENST00000396832 A0A0D9SFI3 127 aa28.37■■■□□ 2.13
CSNK1E-203ENST00000396832 PLA2G4DQ86XP0 818 aa28.37■■■□□ 2.13
CSNK1E-203ENST00000396832 TNMDQ9H2S6 317 aa28.37■■■□□ 2.13
CSNK1E-203ENST00000396832 TMEM51Q9NW97 253 aa28.37■■■□□ 2.13
CSNK1E-203ENST00000396832 KRT85P78386 507 aa28.36■■■□□ 2.13
CSNK1E-203ENST00000396832 ZNF592Q92610 1267 aa28.36■■■□□ 2.13
CSNK1E-203ENST00000396832 DACT1Q9NYF0 836 aa28.36■■■□□ 2.13
CSNK1E-203ENST00000396832 PPFIA3O75145 1194 aa28.35■■■□□ 2.13
CSNK1E-203ENST00000396832 CHGBP05060 677 aa28.35■■■□□ 2.13
CSNK1E-203ENST00000396832 TTC41PQ6P2S7 1318 aa28.35■■■□□ 2.13
CSNK1E-203ENST00000396832 NECTIN1Q15223 517 aa28.35■■■□□ 2.13
CSNK1E-203ENST00000396832 DDX11Q96FC9 970 aa28.35■■■□□ 2.13
CSNK1E-203ENST00000396832 CCDC9Q9Y3X0 531 aaKnown RBP28.35■■■□□ 2.13
CSNK1E-203ENST00000396832 HSP90AB4PQ58FF6 505 aa28.34■■■□□ 2.13
CSNK1E-203ENST00000396832 CACTINQ8WUQ7 758 aaKnown RBP28.34■■■□□ 2.13
CSNK1E-203ENST00000396832 EID1Q9Y6B2 187 aa28.34■■■□□ 2.13
CSNK1E-203ENST00000396832 ZNF530Q6P9A1 599 aaPredicted RBP28.34■■■□□ 2.13
CSNK1E-203ENST00000396832 ZSCAN31Q96LW9 406 aaPredicted RBP28.34■■■□□ 2.13
CSNK1E-203ENST00000396832 FSD1Q9BTV5 496 aa28.34■■■□□ 2.13
CSNK1E-203ENST00000396832 GOLGA6L4A6NEF3 574 aa28.33■■■□□ 2.13
CSNK1E-203ENST00000396832 CEBPZQ03701 1054 aaKnown RBP28.33■■■□□ 2.13
CSNK1E-203ENST00000396832 LARP1Q6PKG0 1096 aaKnown RBP28.33■■■□□ 2.13
CSNK1E-203ENST00000396832 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.33■■■□□ 2.13
CSNK1E-203ENST00000396832 EAF2Q96CJ1 260 aaPredicted RBP28.33■■■□□ 2.13
CSNK1E-203ENST00000396832 SH2B1Q9NRF2 756 aaPredicted RBP28.33■■■□□ 2.13
CSNK1E-203ENST00000396832 TERF2Q15554 542 aa28.33■■■□□ 2.13
CSNK1E-203ENST00000396832 CEP135Q66GS9 1140 aa28.33■■■□□ 2.13
CSNK1E-203ENST00000396832 GPATCH3Q96I76 525 aa28.33■■■□□ 2.13
CSNK1E-203ENST00000396832 PLEKHG1Q9ULL1 1385 aa28.33■■■□□ 2.13
CSNK1E-203ENST00000396832 SLC27A2O14975 620 aa28.33■■■□□ 2.13
CSNK1E-203ENST00000396832 CLIP2Q9UDT6 1046 aa28.33■■■□□ 2.13
CSNK1E-203ENST00000396832 ZNF589Q86UQ0 364 aaPredicted RBP28.32■■■□□ 2.12
CSNK1E-203ENST00000396832 DIP2AQ14689 1571 aa28.32■■■□□ 2.12
CSNK1E-203ENST00000396832 KRT222Q8N1A0 295 aa28.31■■■□□ 2.12
CSNK1E-203ENST00000396832 ZBTB22O15209 634 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms