RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 KIF6Q6ZMV9 814 aa13.82□□□□□ -0.2
PDXDC1-202ENST00000396410 IL25Q9H293 177 aa13.82□□□□□ -0.2
PDXDC1-202ENST00000396410 TNS3Q68CZ2 1445 aa13.82□□□□□ -0.2
PDXDC1-202ENST00000396410 FIBPO43427 364 aa13.82□□□□□ -0.2
PDXDC1-202ENST00000396410 PTH1RQ03431 593 aa13.82□□□□□ -0.2
PDXDC1-202ENST00000396410 RASEFQ8IZ41 740 aa13.82□□□□□ -0.2
PDXDC1-202ENST00000396410 CHAMP1Q96JM3 812 aa13.82□□□□□ -0.2
PDXDC1-202ENST00000396410 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
PDXDC1-202ENST00000396410 SH2B1Q9NRF2 756 aaPredicted RBP13.82□□□□□ -0.2
PDXDC1-202ENST00000396410 TLR7Q9NYK1 1049 aaKnown RBP13.82□□□□□ -0.2
PDXDC1-202ENST00000396410 PDIA6Q15084 440 aa13.81□□□□□ -0.2
PDXDC1-202ENST00000396410 ANKRD1Q15327 319 aa13.81□□□□□ -0.2
PDXDC1-202ENST00000396410 GAS2L3Q86XJ1 694 aa13.81□□□□□ -0.2
PDXDC1-202ENST00000396410 RNF214Q8ND24 703 aa13.81□□□□□ -0.2
PDXDC1-202ENST00000396410 CUL4AQ13619 759 aa13.81□□□□□ -0.2
PDXDC1-202ENST00000396410 STX6O43752 255 aa13.81□□□□□ -0.2
PDXDC1-202ENST00000396410 BRD1O95696 1058 aa13.81□□□□□ -0.2
PDXDC1-202ENST00000396410 STK3Q13188 491 aa13.81□□□□□ -0.2
PDXDC1-202ENST00000396410 CREB3L3Q68CJ9 461 aa13.81□□□□□ -0.2
PDXDC1-202ENST00000396410 CCDC57Q2TAC2 916 aa13.8□□□□□ -0.2
PDXDC1-202ENST00000396410 CLEC17AQ6ZS10 378 aa13.8□□□□□ -0.2
PDXDC1-202ENST00000396410 SLIT3O75094 1523 aa13.8□□□□□ -0.2
PDXDC1-202ENST00000396410 ZNF142P52746 1687 aaPredicted RBP13.8□□□□□ -0.2
PDXDC1-202ENST00000396410 GJB2P29033 226 aa13.8□□□□□ -0.2
PDXDC1-202ENST00000396410 TNNI3KQ59H18 835 aa13.8□□□□□ -0.2
PDXDC1-202ENST00000396410 CCDC85AQ96PX6 553 aaPredicted RBP13.8□□□□□ -0.2
PDXDC1-202ENST00000396410 SLAIN2Q9P270 581 aa13.8□□□□□ -0.2
PDXDC1-202ENST00000396410 FPGT-TNNI3KV9GXZ4 949 aa13.8□□□□□ -0.2
PDXDC1-202ENST00000396410 A1BGP04217 495 aa13.8□□□□□ -0.2
PDXDC1-202ENST00000396410 MST1RQ04912 1400 aa13.8□□□□□ -0.2
PDXDC1-202ENST00000396410 VPS53Q5VIR6 699 aa13.8□□□□□ -0.2
PDXDC1-202ENST00000396410 EPHA10Q5JZY3 1008 aa13.79□□□□□ -0.2
PDXDC1-202ENST00000396410 LARP1BQ659C4 914 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-202ENST00000396410 BRINP3Q76B58 766 aa13.79□□□□□ -0.2
PDXDC1-202ENST00000396410 DDX46Q7L014 1031 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-202ENST00000396410 RUFY3Q7L099 469 aa13.79□□□□□ -0.2
PDXDC1-202ENST00000396410 RGPD2P0DJD1 1756 aa13.79□□□□□ -0.2
PDXDC1-202ENST00000396410 CYP2E1P05181 493 aaPredicted RBP13.79□□□□□ -0.2
PDXDC1-202ENST00000396410 ZSCAN22P10073 491 aaPredicted RBP13.79□□□□□ -0.2
PDXDC1-202ENST00000396410 TCEANC2Q96MN5 208 aa13.79□□□□□ -0.2
PDXDC1-202ENST00000396410 H3BQV1 296 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 KRT32Q14532 448 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 IFFO2Q5TF58 517 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 NECAB1Q8N987 351 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 FAM184AQ8NB25 1140 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 CEP126Q9P2H0 1117 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 USP42Q9H9J4 1324 aaKnown RBP13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 EDC3Q96F86 508 aaKnown RBP13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 TSPY26PQ9H489 355 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 ZDHHC9Q9Y397 364 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 MEGF6O75095 1541 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 WDR17Q8IZU2 1322 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 LRRFIP1Q32MZ4 808 aaKnown RBP13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 COPRSQ9NQ92 184 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 NDUFB9Q9Y6M9 179 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 KIF1AQ12756 1690 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 KDM6AO15550 1401 aaPredicted RBP13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 PDCP20941 246 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 DBNDD2Q9BQY9 259 aa13.78□□□□□ -0.2
PDXDC1-202ENST00000396410 ERVV-2B6SEH9 535 aa13.77□□□□□ -0.2
PDXDC1-202ENST00000396410 GOLIM4O00461 696 aa13.77□□□□□ -0.2
PDXDC1-202ENST00000396410 TTLL7Q6ZT98 887 aa13.77□□□□□ -0.2
PDXDC1-202ENST00000396410 USP48Q86UV5 1035 aa13.77□□□□□ -0.2
PDXDC1-202ENST00000396410 A0A0D9SFI3 127 aa13.77□□□□□ -0.21
PDXDC1-202ENST00000396410 STARD3NLO95772 234 aa13.77□□□□□ -0.21
PDXDC1-202ENST00000396410 FKBP4Q02790 459 aaKnown RBP eCLIP13.77□□□□□ -0.21
PDXDC1-202ENST00000396410 WASHC4Q2M389 1173 aa13.77□□□□□ -0.21
PDXDC1-202ENST00000396410 CCDC158Q5M9N0 1113 aa13.77□□□□□ -0.21
PDXDC1-202ENST00000396410 ADAMTSL3P82987 1691 aa13.77□□□□□ -0.21
PDXDC1-202ENST00000396410 ESPNB1AK53 854 aa13.77□□□□□ -0.21
PDXDC1-202ENST00000396410 SLC27A2O14975 620 aa13.77□□□□□ -0.21
PDXDC1-202ENST00000396410 PRIM1P49642 420 aaKnown RBP13.77□□□□□ -0.21
PDXDC1-202ENST00000396410 ADCK5Q3MIX3 580 aa13.77□□□□□ -0.21
PDXDC1-202ENST00000396410 TTC39AQ5SRH9 613 aa13.77□□□□□ -0.21
PDXDC1-202ENST00000396410 KAZALD1Q96I82 304 aa13.77□□□□□ -0.21
PDXDC1-202ENST00000396410 HMG20BQ9P0W2 317 aa13.77□□□□□ -0.21
PDXDC1-202ENST00000396410 IFIT1P09914 478 aaKnown RBP13.76□□□□□ -0.21
PDXDC1-202ENST00000396410 SYT1P21579 422 aa13.76□□□□□ -0.21
PDXDC1-202ENST00000396410 GPT2Q8TD30 523 aa13.76□□□□□ -0.21
PDXDC1-202ENST00000396410 UTYO14607 1347 aa13.76□□□□□ -0.21
PDXDC1-202ENST00000396410 AK9Q5TCS8 1911 aa13.76□□□□□ -0.21
PDXDC1-202ENST00000396410 CNPY2Q9Y2B0 182 aa13.76□□□□□ -0.21
PDXDC1-202ENST00000396410 MARF1Q9Y4F3 1742 aaKnown RBP13.76□□□□□ -0.21
PDXDC1-202ENST00000396410 DTNBO60941 627 aa13.76□□□□□ -0.21
PDXDC1-202ENST00000396410 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
PDXDC1-202ENST00000396410 ZNF445P59923 1031 aa13.76□□□□□ -0.21
PDXDC1-202ENST00000396410 LRSAM1Q6UWE0 723 aa13.76□□□□□ -0.21
PDXDC1-202ENST00000396410 U3KPZ7 1027 aaPredicted RBP13.76□□□□□ -0.21
PDXDC1-202ENST00000396410 ATP5JP18859 108 aa13.75□□□□□ -0.21
PDXDC1-202ENST00000396410 IL15P40933 162 aaPredicted RBP13.75□□□□□ -0.21
PDXDC1-202ENST00000396410 PTPN12Q05209 780 aaKnown RBP13.75□□□□□ -0.21
PDXDC1-202ENST00000396410 DBNLQ9UJU6 430 aaKnown RBP13.75□□□□□ -0.21
PDXDC1-202ENST00000396410 USP54Q70EL1 1684 aa13.75□□□□□ -0.21
PDXDC1-202ENST00000396410 LMO7Q8WWI1 1683 aa13.75□□□□□ -0.21
PDXDC1-202ENST00000396410 FERMT3Q86UX7 667 aa13.75□□□□□ -0.21
PDXDC1-202ENST00000396410 TM6SF1Q9BZW5 370 aa13.75□□□□□ -0.21
PDXDC1-202ENST00000396410 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
PDXDC1-202ENST00000396410 F13A1P00488 732 aa13.75□□□□□ -0.21
PDXDC1-202ENST00000396410 MCMDC2Q4G0Z9 681 aa13.75□□□□□ -0.21
PDXDC1-202ENST00000396410 ZSWIM6Q9HCJ5 1215 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms