RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 EAF2Q96CJ1 260 aaPredicted RBP18.79■□□□□ 0.6
HOXA3-202ENST00000396352 RBM33Q96EV2 1170 aaKnown RBP18.79■□□□□ 0.6
HOXA3-202ENST00000396352 TPCN1Q9ULQ1 816 aa18.79■□□□□ 0.6
HOXA3-202ENST00000396352 NMIQ13287 307 aaPredicted RBP18.79■□□□□ 0.6
HOXA3-202ENST00000396352 GRM8O00222 908 aa18.78■□□□□ 0.6
HOXA3-202ENST00000396352 C1orf141Q5JVX7 400 aa18.78■□□□□ 0.6
HOXA3-202ENST00000396352 LINS1Q8NG48 757 aa18.78■□□□□ 0.6
HOXA3-202ENST00000396352 BICC1Q9H694 974 aaKnown RBP18.78■□□□□ 0.6
HOXA3-202ENST00000396352 C5P01031 1676 aa18.78■□□□□ 0.6
HOXA3-202ENST00000396352 NPHP4O75161 1426 aaPredicted RBP18.78■□□□□ 0.6
HOXA3-202ENST00000396352 MRC1P22897 1456 aa18.78■□□□□ 0.6
HOXA3-202ENST00000396352 PSME1Q06323 249 aa18.78■□□□□ 0.6
HOXA3-202ENST00000396352 GIMAP6Q6P9H5 292 aa18.78■□□□□ 0.6
HOXA3-202ENST00000396352 NECAB1Q8N987 351 aa18.78■□□□□ 0.6
HOXA3-202ENST00000396352 TLR7Q9NYK1 1049 aaKnown RBP18.78■□□□□ 0.6
HOXA3-202ENST00000396352 ZKSCAN1P17029 563 aaPredicted RBP18.78■□□□□ 0.6
HOXA3-202ENST00000396352 MPNDQ8N594 471 aa18.78■□□□□ 0.6
HOXA3-202ENST00000396352 HDAC5Q9UQL6 1122 aa18.78■□□□□ 0.6
HOXA3-202ENST00000396352 ZNF830Q96NB3 372 aaPredicted RBP18.77■□□□□ 0.6
HOXA3-202ENST00000396352 LMTK3Q96Q04 1460 aa18.77■□□□□ 0.6
HOXA3-202ENST00000396352 KDM4AO75164 1064 aa18.77■□□□□ 0.6
HOXA3-202ENST00000396352 SLC27A2O14975 620 aa18.76■□□□□ 0.59
HOXA3-202ENST00000396352 ESCO1Q5FWF5 840 aa18.76■□□□□ 0.59
HOXA3-202ENST00000396352 PIBF1Q8WXW3 757 aa18.76■□□□□ 0.59
HOXA3-202ENST00000396352 VPS37CA5D8V6 355 aaPredicted RBP18.76■□□□□ 0.59
HOXA3-202ENST00000396352 PDIA6Q15084 440 aa18.76■□□□□ 0.59
HOXA3-202ENST00000396352 ARHGEF25Q86VW2 580 aa18.76■□□□□ 0.59
HOXA3-202ENST00000396352 MED23Q9ULK4 1368 aa18.76■□□□□ 0.59
HOXA3-202ENST00000396352 A0A0D9SFI3 127 aa18.76■□□□□ 0.59
HOXA3-202ENST00000396352 HIP1O00291 1037 aa18.76■□□□□ 0.59
HOXA3-202ENST00000396352 DYNC1I1O14576 645 aa18.76■□□□□ 0.59
HOXA3-202ENST00000396352 CCDC8Q9H0W5 538 aaPredicted RBP18.76■□□□□ 0.59
HOXA3-202ENST00000396352 JCADQ9P266 1359 aa18.75■□□□□ 0.59
HOXA3-202ENST00000396352 FAM13BQ9NYF5 915 aa18.75■□□□□ 0.59
HOXA3-202ENST00000396352 AP5Z1O43299 807 aa18.75■□□□□ 0.59
HOXA3-202ENST00000396352 GCP02774 474 aa18.75■□□□□ 0.59
HOXA3-202ENST00000396352 TTC12Q9H892 705 aaPredicted RBP18.75■□□□□ 0.59
HOXA3-202ENST00000396352 DDX21Q9NR30 783 aaKnown RBP eCLIP18.75■□□□□ 0.59
HOXA3-202ENST00000396352 TAF6LQ9Y6J9 622 aa18.75■□□□□ 0.59
HOXA3-202ENST00000396352 RGPD5Q99666 1765 aa18.74■□□□□ 0.59
HOXA3-202ENST00000396352 IGKV5-2P06315 115 aa18.74■□□□□ 0.59
HOXA3-202ENST00000396352 G3BP1Q13283 466 aaKnown RBP eCLIP18.74■□□□□ 0.59
HOXA3-202ENST00000396352 CDC37L1Q7L3B6 337 aa18.74■□□□□ 0.59
HOXA3-202ENST00000396352 ANKRD24Q8TF21 1146 aa18.74■□□□□ 0.59
HOXA3-202ENST00000396352 KCNJ4P48050 445 aa18.73■□□□□ 0.59
HOXA3-202ENST00000396352 TTC6Q86TZ1 520 aa18.73■□□□□ 0.59
HOXA3-202ENST00000396352 VSIG10Q8N0Z9 540 aa18.73■□□□□ 0.59
HOXA3-202ENST00000396352 PSMA5P28066 241 aa18.73■□□□□ 0.59
HOXA3-202ENST00000396352 LARP1BQ659C4 914 aaKnown RBP18.73■□□□□ 0.59
HOXA3-202ENST00000396352 AIMP1Q12904 312 aaKnown RBP18.72■□□□□ 0.59
HOXA3-202ENST00000396352 ALDH8A1Q9H2A2 487 aaPredicted RBP18.72■□□□□ 0.59
HOXA3-202ENST00000396352 BOLA2Q9H3K6 86 aa18.72■□□□□ 0.59
HOXA3-202ENST00000396352 TRPM3Q9HCF6 1732 aaPredicted RBP18.72■□□□□ 0.59
HOXA3-202ENST00000396352 SCN11AQ9UI33 1791 aa18.72■□□□□ 0.59
HOXA3-202ENST00000396352 DDX58O95786 925 aaKnown RBP18.72■□□□□ 0.59
HOXA3-202ENST00000396352 NOLC1Q14978 699 aaKnown RBP eCLIP18.72■□□□□ 0.59
HOXA3-202ENST00000396352 SIL1Q9H173 461 aa18.72■□□□□ 0.59
HOXA3-202ENST00000396352 TOB2Q14106 344 aaPredicted RBP18.71■□□□□ 0.59
HOXA3-202ENST00000396352 KLHDC4Q8TBB5 520 aa18.71■□□□□ 0.59
HOXA3-202ENST00000396352 MAP7D2Q96T17 732 aa18.71■□□□□ 0.59
HOXA3-202ENST00000396352 FSD1Q9BTV5 496 aa18.71■□□□□ 0.59
HOXA3-202ENST00000396352 ELP1O95163 1332 aa18.71■□□□□ 0.59
HOXA3-202ENST00000396352 RPS6KB1P23443 525 aa18.71■□□□□ 0.59
HOXA3-202ENST00000396352 ZNF589Q86UQ0 364 aaPredicted RBP18.71■□□□□ 0.59
HOXA3-202ENST00000396352 TCEANC2Q96MN5 208 aa18.71■□□□□ 0.59
HOXA3-202ENST00000396352 SPTLC3Q9NUV7 552 aa18.71■□□□□ 0.59
HOXA3-202ENST00000396352 AXIN2Q9Y2T1 843 aa18.71■□□□□ 0.59
HOXA3-202ENST00000396352 C17orf53Q8N3J3 647 aaPredicted RBP18.71■□□□□ 0.59
HOXA3-202ENST00000396352 BLOC1S2Q6QNY1 142 aa18.7■□□□□ 0.58
HOXA3-202ENST00000396352 PDIA4P13667 645 aaKnown RBP18.7■□□□□ 0.58
HOXA3-202ENST00000396352 KRT85P78386 507 aa18.7■□□□□ 0.58
HOXA3-202ENST00000396352 FERMT3Q86UX7 667 aa18.7■□□□□ 0.58
HOXA3-202ENST00000396352 FAM173BQ6P4H8 233 aa18.69■□□□□ 0.58
HOXA3-202ENST00000396352 MYRIPQ8NFW9 859 aa18.69■□□□□ 0.58
HOXA3-202ENST00000396352 NEURL1BA8MQ27 555 aa18.69■□□□□ 0.58
HOXA3-202ENST00000396352 ANKRD1Q15327 319 aa18.69■□□□□ 0.58
HOXA3-202ENST00000396352 TSGA10IPQ3SY00 556 aa18.69■□□□□ 0.58
HOXA3-202ENST00000396352 EPHA10Q5JZY3 1008 aa18.69■□□□□ 0.58
HOXA3-202ENST00000396352 RNF20Q5VTR2 975 aa18.69■□□□□ 0.58
HOXA3-202ENST00000396352 ZNF142P52746 1687 aaPredicted RBP18.69■□□□□ 0.58
HOXA3-202ENST00000396352 COL15A1P39059 1388 aa18.69■□□□□ 0.58
HOXA3-202ENST00000396352 CCDC192P0DO97 292 aa18.68■□□□□ 0.58
HOXA3-202ENST00000396352 LIG1P18858 919 aa18.68■□□□□ 0.58
HOXA3-202ENST00000396352 PDCP20941 246 aa18.68■□□□□ 0.58
HOXA3-202ENST00000396352 ORAI2Q96SN7 254 aa18.68■□□□□ 0.58
HOXA3-202ENST00000396352 KCNF1Q9H3M0 494 aa18.68■□□□□ 0.58
HOXA3-202ENST00000396352 GCKRQ14397 625 aa18.68■□□□□ 0.58
HOXA3-202ENST00000396352 RIC3Q7Z5B4 369 aa18.68■□□□□ 0.58
HOXA3-202ENST00000396352 AFDNP55196 1824 aaKnown RBP18.67■□□□□ 0.58
HOXA3-202ENST00000396352 KDM6AO15550 1401 aaPredicted RBP18.67■□□□□ 0.58
HOXA3-202ENST00000396352 DNTTIP2Q5QJE6 756 aaKnown RBP18.67■□□□□ 0.58
HOXA3-202ENST00000396352 USPL1Q5W0Q7 1092 aa18.67■□□□□ 0.58
HOXA3-202ENST00000396352 LARP1Q6PKG0 1096 aaKnown RBP18.67■□□□□ 0.58
HOXA3-202ENST00000396352 EDC3Q96F86 508 aaKnown RBP18.67■□□□□ 0.58
HOXA3-202ENST00000396352 HMG20BQ9P0W2 317 aa18.67■□□□□ 0.58
HOXA3-202ENST00000396352 TAF5LO75529 589 aa18.67■□□□□ 0.58
HOXA3-202ENST00000396352 ZNF790Q6PG37 636 aa18.67■□□□□ 0.58
HOXA3-202ENST00000396352 ANKLE2Q86XL3 938 aa18.67■□□□□ 0.58
HOXA3-202ENST00000396352 PRIMPOLQ96LW4 560 aa18.67■□□□□ 0.58
HOXA3-202ENST00000396352 PLCB2Q00722 1185 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms