RNA–Protein interactions for RNA: ENST00000396075.5

LDHB-202, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-202ENST00000396075 SMC1BQ8NDV3 1235 aa10.99□□□□□ -0.65
LDHB-202ENST00000396075 RPGRQ92834 1020 aaKnown RBP10.99□□□□□ -0.65
LDHB-202ENST00000396075 RBM17Q96I25 401 aaKnown RBP10.99□□□□□ -0.65
LDHB-202ENST00000396075 ADAMTS8Q9UP79 889 aa10.99□□□□□ -0.65
LDHB-202ENST00000396075 TNRC6CQ9HCJ0 1690 aaKnown RBP10.98□□□□□ -0.65
LDHB-202ENST00000396075 BCORQ6W2J9 1755 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 SPDYE2BA6NHP3 402 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 NFKBIEO00221 500 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 CHL1O00533 1208 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 HOXB7P09629 217 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 SPDYE6P0CI01 402 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 SPDYE2Q495Y8 402 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 CCDC146Q8IYE0 955 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 NLRP3Q96P20 1036 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 ZBTB3Q9H5J0 574 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 RNF123Q5XPI4 1314 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 TIAM2Q8IVF5 1701 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 LAMB4A4D0S4 1761 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 KDM3BQ7LBC6 1761 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 CACNA1SQ13698 1873 aa10.98□□□□□ -0.65
LDHB-202ENST00000396075 IQCA1LA6NCM1 817 aa10.97□□□□□ -0.65
LDHB-202ENST00000396075 FKBP4Q02790 459 aaKnown RBP eCLIP10.97□□□□□ -0.65
LDHB-202ENST00000396075 TTLL7Q6ZT98 887 aa10.97□□□□□ -0.65
LDHB-202ENST00000396075 PIP4P2Q8N4L2 257 aa10.97□□□□□ -0.65
LDHB-202ENST00000396075 CFAP44Q96MT7 982 aa10.97□□□□□ -0.65
LDHB-202ENST00000396075 UTP14AQ9BVJ6 771 aaKnown RBP10.97□□□□□ -0.65
LDHB-202ENST00000396075 IBTKQ9P2D0 1353 aaPredicted RBP10.97□□□□□ -0.65
LDHB-202ENST00000396075 PCNTO95613 3336 aa10.97□□□□□ -0.65
LDHB-202ENST00000396075 GPTP24298 496 aa10.96□□□□□ -0.65
LDHB-202ENST00000396075 ZNF34Q8IZ26 560 aa10.96□□□□□ -0.65
LDHB-202ENST00000396075 JDP2Q8WYK2 163 aa10.96□□□□□ -0.65
LDHB-202ENST00000396075 KLRG1Q96E93 195 aa10.96□□□□□ -0.65
LDHB-202ENST00000396075 DDX21Q9NR30 783 aaKnown RBP eCLIP10.96□□□□□ -0.65
LDHB-202ENST00000396075 ANKRD31Q8N7Z5 1873 aa10.95□□□□□ -0.66
LDHB-202ENST00000396075 HSP90B1P14625 803 aaKnown RBP10.95□□□□□ -0.66
LDHB-202ENST00000396075 GNAI1P63096 354 aa10.95□□□□□ -0.66
LDHB-202ENST00000396075 AIMP1Q12904 312 aaKnown RBP10.95□□□□□ -0.66
LDHB-202ENST00000396075 HDGFL1Q5TGJ6 251 aa10.95□□□□□ -0.66
LDHB-202ENST00000396075 SUSD4Q5VX71 490 aa10.95□□□□□ -0.66
LDHB-202ENST00000396075 COPS6Q7L5N1 327 aa10.95□□□□□ -0.66
LDHB-202ENST00000396075 NUTM1Q86Y26 1132 aa10.95□□□□□ -0.66
LDHB-202ENST00000396075 C7orf43Q8WVR3 580 aa10.95□□□□□ -0.66
LDHB-202ENST00000396075 CRAMP1Q96RY5 1269 aa10.95□□□□□ -0.66
LDHB-202ENST00000396075 HYPKQ9NX55 129 aa10.95□□□□□ -0.66
LDHB-202ENST00000396075 DBF4Q9UBU7 674 aaPredicted RBP10.95□□□□□ -0.66
LDHB-202ENST00000396075 NUP98P52948 1817 aa10.94□□□□□ -0.66
LDHB-202ENST00000396075 HOXA10P31260 410 aaPredicted RBP10.94□□□□□ -0.66
LDHB-202ENST00000396075 CRY2Q49AN0 593 aa10.94□□□□□ -0.66
LDHB-202ENST00000396075 SLC10A5Q5PT55 438 aa10.94□□□□□ -0.66
LDHB-202ENST00000396075 PSMD1Q99460 953 aa10.94□□□□□ -0.66
LDHB-202ENST00000396075 VPS33BQ9H267 617 aa10.94□□□□□ -0.66
LDHB-202ENST00000396075 TRIM35Q9UPQ4 493 aa10.94□□□□□ -0.66
LDHB-202ENST00000396075 FER1L6Q2WGJ9 1857 aa10.93□□□□□ -0.66
LDHB-202ENST00000396075 PITPNM1O00562 1244 aa10.93□□□□□ -0.66
LDHB-202ENST00000396075 ANP32CO43423 234 aa10.93□□□□□ -0.66
LDHB-202ENST00000396075 BBOX1O75936 387 aa10.93□□□□□ -0.66
LDHB-202ENST00000396075 FXR2P51116 673 aaKnown RBP eCLIP10.93□□□□□ -0.66
LDHB-202ENST00000396075 EIF6P56537 245 aaKnown RBP10.93□□□□□ -0.66
LDHB-202ENST00000396075 TCIRG1Q13488 830 aa10.93□□□□□ -0.66
LDHB-202ENST00000396075 PDIA6Q15084 440 aa10.93□□□□□ -0.66
LDHB-202ENST00000396075 ANKRD13DQ6ZTN6 518 aa10.93□□□□□ -0.66
LDHB-202ENST00000396075 SYNE4Q8N205 404 aa10.93□□□□□ -0.66
LDHB-202ENST00000396075 SUPT20HQ8NEM7 779 aa10.93□□□□□ -0.66
LDHB-202ENST00000396075 XAGE3Q8WTP9 111 aa10.93□□□□□ -0.66
LDHB-202ENST00000396075 NECTIN2Q92692 538 aa10.93□□□□□ -0.66
LDHB-202ENST00000396075 IFT57Q9NWB7 429 aa10.93□□□□□ -0.66
LDHB-202ENST00000396075 TRMT112Q9UI30 125 aaKnown RBP10.93□□□□□ -0.66
LDHB-202ENST00000396075 SLX4Q8IY92 1834 aa10.93□□□□□ -0.66
LDHB-202ENST00000396075 RIC1Q4ADV7 1423 aa10.92□□□□□ -0.66
LDHB-202ENST00000396075 DICER1Q9UPY3 1922 aaKnown RBP10.92□□□□□ -0.66
LDHB-202ENST00000396075 APAF1O14727 1248 aa10.92□□□□□ -0.66
LDHB-202ENST00000396075 NTSR2O95665 410 aa10.92□□□□□ -0.66
LDHB-202ENST00000396075 IARSP41252 1262 aaKnown RBP10.92□□□□□ -0.66
LDHB-202ENST00000396075 DDX46Q7L014 1031 aaKnown RBP10.92□□□□□ -0.66
LDHB-202ENST00000396075 TMC4Q7Z404 712 aa10.92□□□□□ -0.66
LDHB-202ENST00000396075 PLBD2Q8NHP8 589 aa10.92□□□□□ -0.66
LDHB-202ENST00000396075 COL11A2P13942 1736 aaPredicted RBP10.92□□□□□ -0.66
LDHB-202ENST00000396075 UBN2Q6ZU65 1347 aa10.91□□□□□ -0.66
LDHB-202ENST00000396075 SH3TC1Q8TE82 1336 aa10.91□□□□□ -0.66
LDHB-202ENST00000396075 ARFGEF2Q9Y6D5 1785 aa10.91□□□□□ -0.66
LDHB-202ENST00000396075 PPEF1O14829 653 aaPredicted RBP10.91□□□□□ -0.66
LDHB-202ENST00000396075 DDX58O95786 925 aaKnown RBP10.91□□□□□ -0.66
LDHB-202ENST00000396075 GOLGA2Q08379 1002 aa10.91□□□□□ -0.66
LDHB-202ENST00000396075 DUSP27Q5VZP5 1158 aa10.91□□□□□ -0.66
LDHB-202ENST00000396075 PNMA8AQ86V59 439 aaPredicted RBP10.91□□□□□ -0.66
LDHB-202ENST00000396075 ZNF277Q9NRM2 450 aaPredicted RBP10.91□□□□□ -0.66
LDHB-202ENST00000396075 CHPF2Q9P2E5 772 aa10.91□□□□□ -0.66
LDHB-202ENST00000396075 ZNF316A6NFI3 1004 aaPredicted RBP10.9□□□□□ -0.66
LDHB-202ENST00000396075 DDNO94850 711 aaPredicted RBP10.9□□□□□ -0.66
LDHB-202ENST00000396075 ANXA1P04083 346 aa10.9□□□□□ -0.66
LDHB-202ENST00000396075 CCDC30Q5VVM6 783 aa10.9□□□□□ -0.66
LDHB-202ENST00000396075 CHADLQ6NUI6 762 aa10.9□□□□□ -0.66
LDHB-202ENST00000396075 RIC3Q7Z5B4 369 aa10.9□□□□□ -0.66
LDHB-202ENST00000396075 NLRP10Q86W26 655 aa10.9□□□□□ -0.66
LDHB-202ENST00000396075 LARGE2Q8N3Y3 721 aa10.9□□□□□ -0.66
LDHB-202ENST00000396075 MBIPQ9NS73 344 aa10.9□□□□□ -0.66
LDHB-202ENST00000396075 HACL1Q9UJ83 578 aa10.9□□□□□ -0.66
LDHB-202ENST00000396075 FZD9O00144 591 aa10.89□□□□□ -0.67
LDHB-202ENST00000396075 HAX1O00165 279 aa10.89□□□□□ -0.67
LDHB-202ENST00000396075 LMOD1P29536 600 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms