RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 SLC16A10Q8TF71 515 aa11.05□□□□□ -0.64
CCR9-203ENST00000395963 ZBTB3Q9H5J0 574 aa11.05□□□□□ -0.64
CCR9-203ENST00000395963 SLC15A2Q16348 729 aa11.04□□□□□ -0.64
CCR9-203ENST00000395963 NLRP10Q86W26 655 aa11.04□□□□□ -0.64
CCR9-203ENST00000395963 ANKRD44Q8N8A2 993 aa11.04□□□□□ -0.64
CCR9-203ENST00000395963 ARHGEF1Q92888 912 aaKnown RBP11.04□□□□□ -0.64
CCR9-203ENST00000395963 CARMIL3Q8ND23 1372 aa11.04□□□□□ -0.64
CCR9-203ENST00000395963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.04□□□□□ -0.64
CCR9-203ENST00000395963 CENPQQ7L2Z9 268 aaPredicted RBP11.04□□□□□ -0.64
CCR9-203ENST00000395963 PIP4K2AP48426 406 aaPredicted RBP11.03□□□□□ -0.64
CCR9-203ENST00000395963 RABL6Q3YEC7 729 aaPredicted RBP11.03□□□□□ -0.64
CCR9-203ENST00000395963 NLGN1Q8N2Q7 840 aa11.03□□□□□ -0.64
CCR9-203ENST00000395963 MEIS3Q99687 375 aa11.03□□□□□ -0.64
CCR9-203ENST00000395963 ZNF330Q9Y3S2 320 aaPredicted RBP11.03□□□□□ -0.64
CCR9-203ENST00000395963 NRXN2Q9P2S2 1712 aa11.03□□□□□ -0.64
CCR9-203ENST00000395963 RTL9Q8NET4 1388 aa11.03□□□□□ -0.64
CCR9-203ENST00000395963 CASP7P55210 303 aa11.03□□□□□ -0.64
CCR9-203ENST00000395963 EZH2Q15910 746 aaKnown RBP11.03□□□□□ -0.64
CCR9-203ENST00000395963 UBE2Q2Q8WVN8 375 aa11.03□□□□□ -0.64
CCR9-203ENST00000395963 GCC1Q96CN9 775 aa11.03□□□□□ -0.64
CCR9-203ENST00000395963 TFCP2L1Q9NZI6 479 aa11.03□□□□□ -0.64
CCR9-203ENST00000395963 FBXO3Q9UK99 471 aa11.03□□□□□ -0.64
CCR9-203ENST00000395963 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
CCR9-203ENST00000395963 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.64
CCR9-203ENST00000395963 UTP14AQ9BVJ6 771 aaKnown RBP11.02□□□□□ -0.64
CCR9-203ENST00000395963 SH3TC1Q8TE82 1336 aa11.02□□□□□ -0.65
CCR9-203ENST00000395963 ATP8B2P98198 1209 aa11.02□□□□□ -0.65
CCR9-203ENST00000395963 HLFQ16534 295 aa11.02□□□□□ -0.65
CCR9-203ENST00000395963 CWF19L2Q2TBE0 894 aaKnown RBP11.02□□□□□ -0.65
CCR9-203ENST00000395963 HSP90AB4PQ58FF6 505 aa11.02□□□□□ -0.65
CCR9-203ENST00000395963 UPF1Q92900 1129 aaKnown RBP eCLIP11.02□□□□□ -0.65
CCR9-203ENST00000395963 IRX6P78412 446 aaPredicted RBP11.01□□□□□ -0.65
CCR9-203ENST00000395963 ZNF827Q17R98 1081 aa11.01□□□□□ -0.65
CCR9-203ENST00000395963 SLC10A5Q5PT55 438 aa11.01□□□□□ -0.65
CCR9-203ENST00000395963 USPL1Q5W0Q7 1092 aa11.01□□□□□ -0.65
CCR9-203ENST00000395963 CEP85Q6P2H3 762 aa11.01□□□□□ -0.65
CCR9-203ENST00000395963 SETDB2Q96T68 719 aa11.01□□□□□ -0.65
CCR9-203ENST00000395963 BCL2L12Q9HB09 334 aa11.01□□□□□ -0.65
CCR9-203ENST00000395963 PDZRN3Q9UPQ7 1066 aa11.01□□□□□ -0.65
CCR9-203ENST00000395963 MYH3P11055 1940 aa11.01□□□□□ -0.65
CCR9-203ENST00000395963 SSH3Q8TE77 659 aa11.01□□□□□ -0.65
CCR9-203ENST00000395963 NIP7Q9Y221 180 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCR9-203ENST00000395963 PNPLA7Q6ZV29 1317 aa11.01□□□□□ -0.65
CCR9-203ENST00000395963 KDM2BQ8NHM5 1336 aa11.01□□□□□ -0.65
CCR9-203ENST00000395963 NTSR2O95665 410 aa11□□□□□ -0.65
CCR9-203ENST00000395963 GYS1P13807 737 aa11□□□□□ -0.65
CCR9-203ENST00000395963 UBN2Q6ZU65 1347 aa11□□□□□ -0.65
CCR9-203ENST00000395963 PDE8AO60658 829 aa11□□□□□ -0.65
CCR9-203ENST00000395963 NBPF7P0C2Y1 421 aaPredicted RBP11□□□□□ -0.65
CCR9-203ENST00000395963 POLA2Q14181 598 aa11□□□□□ -0.65
CCR9-203ENST00000395963 TPTE2Q6XPS3 522 aa11□□□□□ -0.65
CCR9-203ENST00000395963 DDX60Q8IY21 1712 aaKnown RBP11□□□□□ -0.65
CCR9-203ENST00000395963 CASZ1Q86V15 1759 aa10.99□□□□□ -0.65
CCR9-203ENST00000395963 ATP5J2-PTCD1G3V325 749 aa10.99□□□□□ -0.65
CCR9-203ENST00000395963 TM4SF1P30408 202 aa10.99□□□□□ -0.65
CCR9-203ENST00000395963 SMC5Q8IY18 1101 aa10.99□□□□□ -0.65
CCR9-203ENST00000395963 LRP5O75197 1615 aa10.99□□□□□ -0.65
CCR9-203ENST00000395963 KCNQ4P56696 695 aa10.99□□□□□ -0.65
CCR9-203ENST00000395963 ARXQ96QS3 562 aa10.99□□□□□ -0.65
CCR9-203ENST00000395963 TRMT112Q9UI30 125 aaKnown RBP10.99□□□□□ -0.65
CCR9-203ENST00000395963 PCDHB15Q9Y5E8 787 aa10.99□□□□□ -0.65
CCR9-203ENST00000395963 LRRFIP2Q9Y608 721 aaKnown RBP10.99□□□□□ -0.65
CCR9-203ENST00000395963 RAB11FIP3O75154 756 aa10.98□□□□□ -0.65
CCR9-203ENST00000395963 CSF1RP07333 972 aa10.98□□□□□ -0.65
CCR9-203ENST00000395963 UBE3BQ7Z3V4 1068 aa10.98□□□□□ -0.65
CCR9-203ENST00000395963 ERC1Q8IUD2 1116 aa10.98□□□□□ -0.65
CCR9-203ENST00000395963 NOP58Q9Y2X3 529 aaKnown RBP10.98□□□□□ -0.65
CCR9-203ENST00000395963 COL23A1Q86Y22 540 aaPredicted RBP10.98□□□□□ -0.65
CCR9-203ENST00000395963 SUCLG2Q96I99 432 aa10.98□□□□□ -0.65
CCR9-203ENST00000395963 DCTPP1Q9H773 170 aa10.98□□□□□ -0.65
CCR9-203ENST00000395963 PHF14O94880 888 aa10.97□□□□□ -0.65
CCR9-203ENST00000395963 SUSD4Q5VX71 490 aa10.97□□□□□ -0.65
CCR9-203ENST00000395963 TBC1D9BQ66K14 1250 aa10.97□□□□□ -0.65
CCR9-203ENST00000395963 IRS4O14654 1257 aaPredicted RBP10.97□□□□□ -0.65
CCR9-203ENST00000395963 ST5P78524 1137 aa10.97□□□□□ -0.65
CCR9-203ENST00000395963 SF3B3Q15393 1217 aaKnown RBP10.97□□□□□ -0.65
CCR9-203ENST00000395963 DEFB132Q7Z7B7 95 aa10.97□□□□□ -0.65
CCR9-203ENST00000395963 COPRSQ9NQ92 184 aa10.97□□□□□ -0.65
CCR9-203ENST00000395963 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
CCR9-203ENST00000395963 CTSWP56202 376 aa10.96□□□□□ -0.65
CCR9-203ENST00000395963 FOXO4P98177 505 aa10.96□□□□□ -0.65
CCR9-203ENST00000395963 NFIXQ14938 502 aa10.96□□□□□ -0.65
CCR9-203ENST00000395963 NBPF5PQ86XG9 351 aaPredicted RBP10.96□□□□□ -0.65
CCR9-203ENST00000395963 KAZALD1Q96I82 304 aa10.96□□□□□ -0.65
CCR9-203ENST00000395963 SRP68Q9UHB9 627 aaKnown RBP10.96□□□□□ -0.65
CCR9-203ENST00000395963 CIAO1O76071 339 aa10.96□□□□□ -0.66
CCR9-203ENST00000395963 GPTP24298 496 aa10.96□□□□□ -0.66
CCR9-203ENST00000395963 CCDC152Q4G0S7 254 aa10.96□□□□□ -0.66
CCR9-203ENST00000395963 AMIGO3Q86WK7 504 aa10.96□□□□□ -0.66
CCR9-203ENST00000395963 BICC1Q9H694 974 aaKnown RBP10.96□□□□□ -0.66
CCR9-203ENST00000395963 SRGAP3O43295 1099 aa10.95□□□□□ -0.66
CCR9-203ENST00000395963 CNBD1Q8NA66 436 aa10.95□□□□□ -0.66
CCR9-203ENST00000395963 IL27Q8NEV9 243 aa10.95□□□□□ -0.66
CCR9-203ENST00000395963 POLRMTO00411 1230 aaKnown RBP10.95□□□□□ -0.66
CCR9-203ENST00000395963 NBR1Q14596 966 aa10.95□□□□□ -0.66
CCR9-203ENST00000395963 TMC4Q7Z404 712 aa10.95□□□□□ -0.66
CCR9-203ENST00000395963 SIRT2Q8IXJ6 389 aa10.95□□□□□ -0.66
CCR9-203ENST00000395963 KLRG2A4D1S0 409 aaPredicted RBP10.94□□□□□ -0.66
CCR9-203ENST00000395963 NLRP3Q96P20 1036 aa10.94□□□□□ -0.66
CCR9-203ENST00000395963 PARP3Q9Y6F1 533 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms