RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 STARD3NLO95772 234 aa10.96□□□□□ -0.65
RAE1-202ENST00000395840 CLEC17AQ6ZS10 378 aa10.96□□□□□ -0.65
RAE1-202ENST00000395840 PROM2Q8N271 834 aa10.96□□□□□ -0.65
RAE1-202ENST00000395840 TIGD1Q96MW7 591 aa10.96□□□□□ -0.65
RAE1-202ENST00000395840 TSPYL4Q9UJ04 414 aa10.96□□□□□ -0.65
RAE1-202ENST00000395840 SOS1Q07889 1333 aaPredicted RBP10.96□□□□□ -0.65
RAE1-202ENST00000395840 NOLC1Q14978 699 aaKnown RBP eCLIP10.96□□□□□ -0.66
RAE1-202ENST00000395840 WWC1Q8IX03 1113 aa10.96□□□□□ -0.66
RAE1-202ENST00000395840 FEZ1Q99689 392 aa10.96□□□□□ -0.66
RAE1-202ENST00000395840 C5P01031 1676 aa10.95□□□□□ -0.66
RAE1-202ENST00000395840 HEG1Q9ULI3 1381 aa10.95□□□□□ -0.66
RAE1-202ENST00000395840 CHL1O00533 1208 aa10.95□□□□□ -0.66
RAE1-202ENST00000395840 CD2BP2O95400 341 aaKnown RBP10.95□□□□□ -0.66
RAE1-202ENST00000395840 SNRPA1P09661 255 aaKnown RBP10.95□□□□□ -0.66
RAE1-202ENST00000395840 GABPB1Q06547 395 aaPredicted RBP10.95□□□□□ -0.66
RAE1-202ENST00000395840 OGFRQ9NZT2 677 aa10.95□□□□□ -0.66
RAE1-202ENST00000395840 RBM27Q9P2N5 1060 aaKnown RBP10.95□□□□□ -0.66
RAE1-202ENST00000395840 KCPQ6ZWJ8 1503 aa10.95□□□□□ -0.66
RAE1-202ENST00000395840 KDM3BQ7LBC6 1761 aa10.95□□□□□ -0.66
RAE1-202ENST00000395840 TRIM6-TRIM34B2RNG4 842 aa10.95□□□□□ -0.66
RAE1-202ENST00000395840 PTCD1O75127 700 aaKnown RBP10.95□□□□□ -0.66
RAE1-202ENST00000395840 SLFN14P0C7P3 912 aa10.95□□□□□ -0.66
RAE1-202ENST00000395840 CAPN2P17655 700 aa10.95□□□□□ -0.66
RAE1-202ENST00000395840 MPNDQ8N594 471 aa10.95□□□□□ -0.66
RAE1-202ENST00000395840 PIBF1Q8WXW3 757 aa10.95□□□□□ -0.66
RAE1-202ENST00000395840 TRIM34Q9BYJ4 488 aa10.95□□□□□ -0.66
RAE1-202ENST00000395840 RWDD1Q9H446 243 aaPredicted RBP10.95□□□□□ -0.66
RAE1-202ENST00000395840 CNTNAP4Q9C0A0 1308 aa10.95□□□□□ -0.66
RAE1-202ENST00000395840 C17orf53Q8N3J3 647 aaPredicted RBP10.94□□□□□ -0.66
RAE1-202ENST00000395840 RNF214Q8ND24 703 aa10.94□□□□□ -0.66
RAE1-202ENST00000395840 LMBRD1Q9NUN5 540 aa10.94□□□□□ -0.66
RAE1-202ENST00000395840 HOXB7P09629 217 aa10.94□□□□□ -0.66
RAE1-202ENST00000395840 SLC39A6Q13433 755 aa10.94□□□□□ -0.66
RAE1-202ENST00000395840 SLC15A2Q16348 729 aa10.94□□□□□ -0.66
RAE1-202ENST00000395840 ANKRD7Q92527 254 aa10.94□□□□□ -0.66
RAE1-202ENST00000395840 ZBTB9Q96C00 473 aa10.94□□□□□ -0.66
RAE1-202ENST00000395840 AK7Q96M32 723 aa10.94□□□□□ -0.66
RAE1-202ENST00000395840 K7ELQ4 463 aaPredicted RBP10.93□□□□□ -0.66
RAE1-202ENST00000395840 ZNF853P0CG23 659 aa10.93□□□□□ -0.66
RAE1-202ENST00000395840 LRSAM1Q6UWE0 723 aa10.93□□□□□ -0.66
RAE1-202ENST00000395840 THUMPD2Q9BTF0 503 aaKnown RBP10.93□□□□□ -0.66
RAE1-202ENST00000395840 LRRC4BQ9NT99 713 aa10.93□□□□□ -0.66
RAE1-202ENST00000395840 QSER1Q2KHR3 1735 aa10.93□□□□□ -0.66
RAE1-202ENST00000395840 TAF1LQ8IZX4 1826 aa10.93□□□□□ -0.66
RAE1-202ENST00000395840 ADRA2BP18089 450 aa10.93□□□□□ -0.66
RAE1-202ENST00000395840 EIF4A1P60842 406 aaKnown RBP10.93□□□□□ -0.66
RAE1-202ENST00000395840 AKT1S1Q96B36 256 aa10.93□□□□□ -0.66
RAE1-202ENST00000395840 ZNF496Q96IT1 587 aaPredicted RBP10.93□□□□□ -0.66
RAE1-202ENST00000395840 C4BP0C0L5 1744 aa10.92□□□□□ -0.66
RAE1-202ENST00000395840 SYCE3A1L190 88 aa10.92□□□□□ -0.66
RAE1-202ENST00000395840 TFCP2L1Q9NZI6 479 aa10.92□□□□□ -0.66
RAE1-202ENST00000395840 COL5A3P25940 1745 aaPredicted RBP10.92□□□□□ -0.66
RAE1-202ENST00000395840 TULP2O00295 520 aa10.91□□□□□ -0.66
RAE1-202ENST00000395840 GPT2Q8TD30 523 aa10.91□□□□□ -0.66
RAE1-202ENST00000395840 SLC16A10Q8TF71 515 aa10.91□□□□□ -0.66
RAE1-202ENST00000395840 RNF216Q9NWF9 866 aaPredicted RBP10.91□□□□□ -0.66
RAE1-202ENST00000395840 TNNQ9UQP3 1299 aa10.91□□□□□ -0.66
RAE1-202ENST00000395840 RTCBQ9Y3I0 505 aaKnown RBP10.91□□□□□ -0.66
RAE1-202ENST00000395840 TJP1Q07157 1748 aa10.91□□□□□ -0.66
RAE1-202ENST00000395840 A0A087WZG4 1122 aa10.91□□□□□ -0.66
RAE1-202ENST00000395840 RLBP1P12271 317 aa10.91□□□□□ -0.66
RAE1-202ENST00000395840 FKBP5Q13451 457 aaPredicted RBP10.91□□□□□ -0.66
RAE1-202ENST00000395840 ITPK1Q13572 414 aa10.91□□□□□ -0.66
RAE1-202ENST00000395840 LINC00116Q8NCU8 138 aa10.91□□□□□ -0.66
RAE1-202ENST00000395840 CCDC87Q9NVE4 849 aa10.91□□□□□ -0.66
RAE1-202ENST00000395840 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.9□□□□□ -0.66
RAE1-202ENST00000395840 RIOK3O14730 519 aaKnown RBP10.9□□□□□ -0.66
RAE1-202ENST00000395840 PRPF40AO75400 957 aaKnown RBP10.9□□□□□ -0.66
RAE1-202ENST00000395840 GIGYF1O75420 1035 aaPredicted RBP10.9□□□□□ -0.66
RAE1-202ENST00000395840 CYP19A1P11511 503 aaPredicted RBP10.9□□□□□ -0.66
RAE1-202ENST00000395840 CHMP4CQ96CF2 233 aa10.9□□□□□ -0.66
RAE1-202ENST00000395840 SLC4A9Q96Q91 983 aa10.9□□□□□ -0.66
RAE1-202ENST00000395840 KIF2CQ99661 725 aa10.9□□□□□ -0.66
RAE1-202ENST00000395840 MIS18AQ9NYP9 233 aa10.9□□□□□ -0.66
RAE1-202ENST00000395840 RPS6KA4O75676 772 aa10.9□□□□□ -0.66
RAE1-202ENST00000395840 TERF2Q15554 542 aa10.9□□□□□ -0.66
RAE1-202ENST00000395840 DNAJC10Q8IXB1 793 aa10.9□□□□□ -0.66
RAE1-202ENST00000395840 MBIPQ9NS73 344 aa10.9□□□□□ -0.66
RAE1-202ENST00000395840 TMEM63CQ9P1W3 806 aa10.9□□□□□ -0.66
RAE1-202ENST00000395840 LAMB4A4D0S4 1761 aa10.9□□□□□ -0.67
RAE1-202ENST00000395840 ERICH4A6NGS2 130 aa10.89□□□□□ -0.67
RAE1-202ENST00000395840 CRKLP46109 303 aaKnown RBP10.89□□□□□ -0.67
RAE1-202ENST00000395840 TTC12Q9H892 705 aaPredicted RBP10.89□□□□□ -0.67
RAE1-202ENST00000395840 TRAPPC3LQ5T215 181 aa10.89□□□□□ -0.67
RAE1-202ENST00000395840 TRERF1Q96PN7 1200 aa10.89□□□□□ -0.67
RAE1-202ENST00000395840 CALCOCO1Q9P1Z2 691 aa10.89□□□□□ -0.67
RAE1-202ENST00000395840 GNPATO15228 680 aa10.88□□□□□ -0.67
RAE1-202ENST00000395840 KCNQ3O43525 872 aa10.88□□□□□ -0.67
RAE1-202ENST00000395840 IL6STP40189 918 aaPredicted RBP10.88□□□□□ -0.67
RAE1-202ENST00000395840 DIAPH3Q9NSV4 1193 aa10.88□□□□□ -0.67
RAE1-202ENST00000395840 CTNNA3Q9UI47 895 aa10.88□□□□□ -0.67
RAE1-202ENST00000395840 RGL2O15211 777 aa10.88□□□□□ -0.67
RAE1-202ENST00000395840 SPTLC3Q9NUV7 552 aa10.88□□□□□ -0.67
RAE1-202ENST00000395840 CTIFO43310 598 aaKnown RBP10.88□□□□□ -0.67
RAE1-202ENST00000395840 CHAF1AQ13111 956 aaPredicted RBP10.88□□□□□ -0.67
RAE1-202ENST00000395840 R3HDM1Q15032 1099 aaKnown RBP10.88□□□□□ -0.67
RAE1-202ENST00000395840 ZNF827Q17R98 1081 aa10.88□□□□□ -0.67
RAE1-202ENST00000395840 INTS5Q6P9B9 1019 aaKnown RBP10.88□□□□□ -0.67
RAE1-202ENST00000395840 KCNQ4P56696 695 aa10.87□□□□□ -0.67
RAE1-202ENST00000395840 KIF16BQ96L93 1317 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms