RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 DCTN1Q14203 1278 aa18.09■□□□□ 0.49
CHCHD2-201ENST00000395422 PAXIP1Q6ZW49 1069 aaPredicted RBP18.09■□□□□ 0.49
CHCHD2-201ENST00000395422 THSD7BQ9C0I4 1608 aa18.09■□□□□ 0.49
CHCHD2-201ENST00000395422 CCDC85CA6NKD9 419 aa18.08■□□□□ 0.48
CHCHD2-201ENST00000395422 EIF6P56537 245 aaKnown RBP18.08■□□□□ 0.48
CHCHD2-201ENST00000395422 GPR101Q96P66 508 aaPredicted RBP18.08■□□□□ 0.48
CHCHD2-201ENST00000395422 TSKSQ9UJT2 592 aa18.08■□□□□ 0.48
CHCHD2-201ENST00000395422 NPC1L1Q9UHC9 1359 aa18.07■□□□□ 0.48
CHCHD2-201ENST00000395422 GTF2E1P29083 439 aaPredicted RBP18.07■□□□□ 0.48
CHCHD2-201ENST00000395422 LMOD1P29536 600 aaPredicted RBP18.07■□□□□ 0.48
CHCHD2-201ENST00000395422 AOC2O75106 756 aa18.06■□□□□ 0.48
CHCHD2-201ENST00000395422 RGS19P49795 217 aa18.06■□□□□ 0.48
CHCHD2-201ENST00000395422 TLL2Q9Y6L7 1015 aa18.06■□□□□ 0.48
CHCHD2-201ENST00000395422 ECE1P42892 770 aa18.05■□□□□ 0.48
CHCHD2-201ENST00000395422 MLLT1Q03111 559 aaPredicted RBP18.05■□□□□ 0.48
CHCHD2-201ENST00000395422 CC2D2BQ6DHV5 1058 aa18.05■□□□□ 0.48
CHCHD2-201ENST00000395422 LARGE2Q8N3Y3 721 aa18.05■□□□□ 0.48
CHCHD2-201ENST00000395422 MIS18AQ9NYP9 233 aa18.05■□□□□ 0.48
CHCHD2-201ENST00000395422 UBN2Q6ZU65 1347 aa18.04■□□□□ 0.48
CHCHD2-201ENST00000395422 HOXA10P31260 410 aaPredicted RBP18.04■□□□□ 0.48
CHCHD2-201ENST00000395422 C3orf67Q6ZVT6 689 aa18.04■□□□□ 0.48
CHCHD2-201ENST00000395422 USP50Q70EL3 339 aaPredicted RBP18.04■□□□□ 0.48
CHCHD2-201ENST00000395422 NGEFQ8N5V2 710 aa18.04■□□□□ 0.48
CHCHD2-201ENST00000395422 RTF1Q92541 710 aaKnown RBP18.04■□□□□ 0.48
CHCHD2-201ENST00000395422 BEGAINQ9BUH8 593 aa18.04■□□□□ 0.48
CHCHD2-201ENST00000395422 TCERG1O14776 1098 aaKnown RBP18.03■□□□□ 0.48
CHCHD2-201ENST00000395422 TTLL7Q6ZT98 887 aa18.03■□□□□ 0.48
CHCHD2-201ENST00000395422 NYXQ9GZU5 481 aa18.03■□□□□ 0.48
CHCHD2-201ENST00000395422 GPTP24298 496 aa18.02■□□□□ 0.48
CHCHD2-201ENST00000395422 RIC1Q4ADV7 1423 aa18.02■□□□□ 0.48
CHCHD2-201ENST00000395422 RPGRQ92834 1020 aaKnown RBP18.02■□□□□ 0.48
CHCHD2-201ENST00000395422 ERVV-1B6SEH8 477 aa18.01■□□□□ 0.47
CHCHD2-201ENST00000395422 PPEF1O14829 653 aaPredicted RBP18.01■□□□□ 0.47
CHCHD2-201ENST00000395422 SUSD4Q5VX71 490 aa18.01■□□□□ 0.47
CHCHD2-201ENST00000395422 SAPCD2Q86UD0 394 aa18.01■□□□□ 0.47
CHCHD2-201ENST00000395422 MAP3K15Q6ZN16 1313 aa18■□□□□ 0.47
CHCHD2-201ENST00000395422 U2AF1L5P0DN76 240 aaPredicted RBP18■□□□□ 0.47
CHCHD2-201ENST00000395422 MAP2K2P36507 400 aa18■□□□□ 0.47
CHCHD2-201ENST00000395422 U2AF1Q01081 240 aaKnown RBP eCLIP18■□□□□ 0.47
CHCHD2-201ENST00000395422 TAF7Q15545 349 aaPredicted RBP18■□□□□ 0.47
CHCHD2-201ENST00000395422 AOC3Q16853 763 aa18■□□□□ 0.47
CHCHD2-201ENST00000395422 NIM1KQ8IY84 436 aa18■□□□□ 0.47
CHCHD2-201ENST00000395422 CRAMP1Q96RY5 1269 aa18■□□□□ 0.47
CHCHD2-201ENST00000395422 MCOLN1Q9GZU1 580 aa18■□□□□ 0.47
CHCHD2-201ENST00000395422 GPRC5DQ9NZD1 345 aa18■□□□□ 0.47
CHCHD2-201ENST00000395422 PPIP5K2O43314 1243 aa17.99■□□□□ 0.47
CHCHD2-201ENST00000395422 CELF2O95319 508 aaKnown RBP17.99■□□□□ 0.47
CHCHD2-201ENST00000395422 NTSR2O95665 410 aa17.99■□□□□ 0.47
CHCHD2-201ENST00000395422 GLIS2Q9BZE0 524 aaPredicted RBP17.99■□□□□ 0.47
CHCHD2-201ENST00000395422 ADARB2Q9NS39 739 aaKnown RBP17.99■□□□□ 0.47
CHCHD2-201ENST00000395422 HTATSF1O43719 755 aaKnown RBP17.98■□□□□ 0.47
CHCHD2-201ENST00000395422 GRIPAP1Q4V328 841 aa17.98■□□□□ 0.47
CHCHD2-201ENST00000395422 RBM17Q96I25 401 aaKnown RBP17.98■□□□□ 0.47
CHCHD2-201ENST00000395422 CFAP53Q96M91 514 aa17.98■□□□□ 0.47
CHCHD2-201ENST00000395422 ZBTB3Q9H5J0 574 aa17.98■□□□□ 0.47
CHCHD2-201ENST00000395422 RRP7AQ9Y3A4 280 aaKnown RBP17.98■□□□□ 0.47
CHCHD2-201ENST00000395422 IBTKQ9P2D0 1353 aaPredicted RBP17.98■□□□□ 0.47
CHCHD2-201ENST00000395422 CXCL9Q07325 125 aa17.97■□□□□ 0.47
CHCHD2-201ENST00000395422 ZNF34Q8IZ26 560 aa17.97■□□□□ 0.47
CHCHD2-201ENST00000395422 NUDCQ9Y266 331 aa17.97■□□□□ 0.47
CHCHD2-201ENST00000395422 MYL6BP14649 208 aa17.96■□□□□ 0.47
CHCHD2-201ENST00000395422 GMPSP49915 693 aaPredicted RBP17.96■□□□□ 0.47
CHCHD2-201ENST00000395422 HIRAP54198 1017 aaPredicted RBP17.96■□□□□ 0.47
CHCHD2-201ENST00000395422 KIF6Q6ZMV9 814 aa17.96■□□□□ 0.47
CHCHD2-201ENST00000395422 ZIC5Q96T25 663 aa17.96■□□□□ 0.47
CHCHD2-201ENST00000395422 BRPF1P55201 1214 aaPredicted RBP17.95■□□□□ 0.46
CHCHD2-201ENST00000395422 EIF4A1P60842 406 aaKnown RBP17.95■□□□□ 0.46
CHCHD2-201ENST00000395422 CFAP44Q96MT7 982 aa17.95■□□□□ 0.46
CHCHD2-201ENST00000395422 PGAP2Q9UHJ9 254 aa17.95■□□□□ 0.46
CHCHD2-201ENST00000395422 ZNRF3Q9ULT6 936 aa17.95■□□□□ 0.46
CHCHD2-201ENST00000395422 ATP6V0A2Q9Y487 856 aa17.95■□□□□ 0.46
CHCHD2-201ENST00000395422 CA12O43570 354 aa17.94■□□□□ 0.46
CHCHD2-201ENST00000395422 CIAPIN1Q6FI81 312 aa17.94■□□□□ 0.46
CHCHD2-201ENST00000395422 CCER1Q8TC90 406 aaPredicted RBP17.94■□□□□ 0.46
CHCHD2-201ENST00000395422 TRPM4Q8TD43 1214 aa17.94■□□□□ 0.46
CHCHD2-201ENST00000395422 HHIPL1Q96JK4 782 aa17.94■□□□□ 0.46
CHCHD2-201ENST00000395422 RTFDC1Q9BY42 306 aaPredicted RBP17.94■□□□□ 0.46
CHCHD2-201ENST00000395422 ZNF408Q9H9D4 720 aa17.94■□□□□ 0.46
CHCHD2-201ENST00000395422 LAMB4A4D0S4 1761 aa17.94■□□□□ 0.46
CHCHD2-201ENST00000395422 SHTN1A0MZ66 631 aa17.93■□□□□ 0.46
CHCHD2-201ENST00000395422 PPP2R1AP30153 589 aa17.93■□□□□ 0.46
CHCHD2-201ENST00000395422 DLK2Q6UY11 383 aa17.93■□□□□ 0.46
CHCHD2-201ENST00000395422 ABCC4O15439 1325 aa17.93■□□□□ 0.46
CHCHD2-201ENST00000395422 DGKZQ13574 1117 aa17.92■□□□□ 0.46
CHCHD2-201ENST00000395422 GIGYF2Q6Y7W6 1299 aaKnown RBP17.92■□□□□ 0.46
CHCHD2-201ENST00000395422 THUMPD2Q9BTF0 503 aaKnown RBP17.92■□□□□ 0.46
CHCHD2-201ENST00000395422 VPS33BQ9H267 617 aa17.92■□□□□ 0.46
CHCHD2-201ENST00000395422 TRPM7Q96QT4 1865 aa17.92■□□□□ 0.46
CHCHD2-201ENST00000395422 RAD17O75943 681 aa17.91■□□□□ 0.46
CHCHD2-201ENST00000395422 LRP10Q7Z4F1 713 aa17.91■□□□□ 0.46
CHCHD2-201ENST00000395422 NLRP3Q96P20 1036 aa17.91■□□□□ 0.46
CHCHD2-201ENST00000395422 KIAA2012Q0VF49 1180 aa17.9■□□□□ 0.46
CHCHD2-201ENST00000395422 SLC10A5Q5PT55 438 aa17.9■□□□□ 0.46
CHCHD2-201ENST00000395422 PPP1R42Q7Z4L9 355 aa17.9■□□□□ 0.46
CHCHD2-201ENST00000395422 PNISRQ8TF01 805 aaKnown RBP17.9■□□□□ 0.46
CHCHD2-201ENST00000395422 ZC3H15Q8WU90 426 aaKnown RBP17.9■□□□□ 0.46
CHCHD2-201ENST00000395422 NUP98P52948 1817 aa17.9■□□□□ 0.46
CHCHD2-201ENST00000395422 YDJCA8MPS7 323 aa17.89■□□□□ 0.45
CHCHD2-201ENST00000395422 PARP10Q53GL7 1025 aa17.89■□□□□ 0.45
CHCHD2-201ENST00000395422 DPP8Q6V1X1 898 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms