RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 SLX4Q8IY92 1834 aa18.06■□□□□ 0.48
HLA-DMA-203ENST00000395305 RNF123Q5XPI4 1314 aa18.05■□□□□ 0.48
HLA-DMA-203ENST00000395305 NFKBIEO00221 500 aa18.05■□□□□ 0.48
HLA-DMA-203ENST00000395305 HOXA10P31260 410 aaPredicted RBP18.05■□□□□ 0.48
HLA-DMA-203ENST00000395305 RASSF7Q02833 373 aa18.05■□□□□ 0.48
HLA-DMA-203ENST00000395305 RIC1Q4ADV7 1423 aa18.05■□□□□ 0.48
HLA-DMA-203ENST00000395305 ABCC12Q96J65 1359 aa18.04■□□□□ 0.48
HLA-DMA-203ENST00000395305 TRIM28Q13263 835 aaKnown RBP18.04■□□□□ 0.48
HLA-DMA-203ENST00000395305 NLRP3Q96P20 1036 aa18.04■□□□□ 0.48
HLA-DMA-203ENST00000395305 ISCA1Q9BUE6 129 aa18.04■□□□□ 0.48
HLA-DMA-203ENST00000395305 PHAXQ9H814 394 aaKnown RBP18.04■□□□□ 0.48
HLA-DMA-203ENST00000395305 PRELPP51888 382 aa18.03■□□□□ 0.48
HLA-DMA-203ENST00000395305 C1QTNF8P60827 252 aa18.03■□□□□ 0.48
HLA-DMA-203ENST00000395305 TWISTNBQ3B726 338 aaPredicted RBP18.03■□□□□ 0.48
HLA-DMA-203ENST00000395305 RIC3Q7Z5B4 369 aa18.03■□□□□ 0.48
HLA-DMA-203ENST00000395305 RPGRQ92834 1020 aaKnown RBP18.03■□□□□ 0.48
HLA-DMA-203ENST00000395305 TRMT112Q9UI30 125 aaKnown RBP18.03■□□□□ 0.48
HLA-DMA-203ENST00000395305 LTBP3Q9NS15 1303 aa18.02■□□□□ 0.48
HLA-DMA-203ENST00000395305 ZC3H4Q9UPT8 1303 aaKnown RBP18.02■□□□□ 0.48
HLA-DMA-203ENST00000395305 GOLGA2Q08379 1002 aa18.02■□□□□ 0.48
HLA-DMA-203ENST00000395305 RBM17Q96I25 401 aaKnown RBP18.02■□□□□ 0.48
HLA-DMA-203ENST00000395305 CRAMP1Q96RY5 1269 aa18.02■□□□□ 0.48
HLA-DMA-203ENST00000395305 ARFGEF2Q9Y6D5 1785 aa18.02■□□□□ 0.47
HLA-DMA-203ENST00000395305 SH3TC1Q8TE82 1336 aa18.01■□□□□ 0.47
HLA-DMA-203ENST00000395305 DDX58O95786 925 aaKnown RBP18.01■□□□□ 0.47
HLA-DMA-203ENST00000395305 CCDC93Q567U6 631 aa18.01■□□□□ 0.47
HLA-DMA-203ENST00000395305 RTKN2Q8IZC4 609 aa18.01■□□□□ 0.47
HLA-DMA-203ENST00000395305 STK31Q9BXU1 1019 aa18.01■□□□□ 0.47
HLA-DMA-203ENST00000395305 FER1L6Q2WGJ9 1857 aa18.01■□□□□ 0.47
HLA-DMA-203ENST00000395305 ANKRD36CQ5JPF3 1778 aa18■□□□□ 0.47
HLA-DMA-203ENST00000395305 ATP5J2-PTCD1G3V325 749 aa18■□□□□ 0.47
HLA-DMA-203ENST00000395305 C3orf67Q6ZVT6 689 aa18■□□□□ 0.47
HLA-DMA-203ENST00000395305 SYNE4Q8N205 404 aa18■□□□□ 0.47
HLA-DMA-203ENST00000395305 TAOK3Q9H2K8 898 aa18■□□□□ 0.47
HLA-DMA-203ENST00000395305 CCDC88AQ3V6T2 1871 aa18■□□□□ 0.47
HLA-DMA-203ENST00000395305 FANCIQ9NVI1 1328 aa17.99■□□□□ 0.47
HLA-DMA-203ENST00000395305 CACNA1SQ13698 1873 aa17.99■□□□□ 0.47
HLA-DMA-203ENST00000395305 CCER2I3L3R5 266 aa17.99■□□□□ 0.47
HLA-DMA-203ENST00000395305 HCLS1P14317 486 aaPredicted RBP17.99■□□□□ 0.47
HLA-DMA-203ENST00000395305 CC2D2BQ6DHV5 1058 aa17.99■□□□□ 0.47
HLA-DMA-203ENST00000395305 KDM2BQ8NHM5 1336 aa17.98■□□□□ 0.47
HLA-DMA-203ENST00000395305 KIF3CO14782 793 aa17.98■□□□□ 0.47
HLA-DMA-203ENST00000395305 VAMP4O75379 141 aa17.98■□□□□ 0.47
HLA-DMA-203ENST00000395305 SLC4A2P04920 1241 aa17.98■□□□□ 0.47
HLA-DMA-203ENST00000395305 GRIPAP1Q4V328 841 aa17.98■□□□□ 0.47
HLA-DMA-203ENST00000395305 MYH16Q9H6N6 1097 aa17.98■□□□□ 0.47
HLA-DMA-203ENST00000395305 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
HLA-DMA-203ENST00000395305 TNRC6CQ9HCJ0 1690 aaKnown RBP17.98■□□□□ 0.47
HLA-DMA-203ENST00000395305 FKBP4Q02790 459 aaKnown RBP eCLIP17.97■□□□□ 0.47
HLA-DMA-203ENST00000395305 EXOSC9Q06265 439 aaKnown RBP17.97■□□□□ 0.47
HLA-DMA-203ENST00000395305 KSR2Q6VAB6 950 aa17.97■□□□□ 0.47
HLA-DMA-203ENST00000395305 FAM89AQ96GI7 184 aa17.97■□□□□ 0.47
HLA-DMA-203ENST00000395305 METTL22Q9BUU2 404 aaPredicted RBP17.97■□□□□ 0.47
HLA-DMA-203ENST00000395305 GLTPD2A6NH11 291 aa17.96■□□□□ 0.47
HLA-DMA-203ENST00000395305 TCERG1O14776 1098 aaKnown RBP17.96■□□□□ 0.47
HLA-DMA-203ENST00000395305 OLFM4Q6UX06 510 aa17.96■□□□□ 0.47
HLA-DMA-203ENST00000395305 CCDC191Q8NCU4 936 aa17.96■□□□□ 0.47
HLA-DMA-203ENST00000395305 MYD88Q99836 296 aa17.96■□□□□ 0.47
HLA-DMA-203ENST00000395305 NMRK2Q9NPI5 230 aa17.96■□□□□ 0.47
HLA-DMA-203ENST00000395305 ZNF521Q96K83 1311 aa17.96■□□□□ 0.46
HLA-DMA-203ENST00000395305 BBOX1O75936 387 aa17.95■□□□□ 0.46
HLA-DMA-203ENST00000395305 DPY19L2Q6NUT2 758 aa17.95■□□□□ 0.46
HLA-DMA-203ENST00000395305 ZBTB38Q8NAP3 1195 aaPredicted RBP17.95■□□□□ 0.46
HLA-DMA-203ENST00000395305 DICER1Q9UPY3 1922 aaKnown RBP17.94■□□□□ 0.46
HLA-DMA-203ENST00000395305 PI4KAP2A4QPH2 592 aa17.94■□□□□ 0.46
HLA-DMA-203ENST00000395305 PPEF1O14829 653 aaPredicted RBP17.94■□□□□ 0.46
HLA-DMA-203ENST00000395305 SF3B3Q15393 1217 aaKnown RBP17.94■□□□□ 0.46
HLA-DMA-203ENST00000395305 DDX46Q7L014 1031 aaKnown RBP17.94■□□□□ 0.46
HLA-DMA-203ENST00000395305 G2E3Q7L622 706 aa17.94■□□□□ 0.46
HLA-DMA-203ENST00000395305 PI4KAP1Q8N8J0 262 aa17.94■□□□□ 0.46
HLA-DMA-203ENST00000395305 ZNF428Q96B54 188 aa17.94■□□□□ 0.46
HLA-DMA-203ENST00000395305 PSMD1Q99460 953 aa17.94■□□□□ 0.46
HLA-DMA-203ENST00000395305 MAP3K2Q9Y2U5 619 aa17.94■□□□□ 0.46
HLA-DMA-203ENST00000395305 HSP90B1P14625 803 aaKnown RBP17.93■□□□□ 0.46
HLA-DMA-203ENST00000395305 TMX4Q9H1E5 349 aaPredicted RBP17.93■□□□□ 0.46
HLA-DMA-203ENST00000395305 RRAGCQ9HB90 399 aa17.93■□□□□ 0.46
HLA-DMA-203ENST00000395305 CWC25Q9NXE8 425 aaPredicted RBP17.93■□□□□ 0.46
HLA-DMA-203ENST00000395305 ATP6V0A2Q9Y487 856 aa17.93■□□□□ 0.46
HLA-DMA-203ENST00000395305 CACNA1FO60840 1977 aa17.93■□□□□ 0.46
HLA-DMA-203ENST00000395305 IRS4O14654 1257 aaPredicted RBP17.92■□□□□ 0.46
HLA-DMA-203ENST00000395305 TOMM70O94826 608 aa17.92■□□□□ 0.46
HLA-DMA-203ENST00000395305 PCCAP05165 728 aaPredicted RBP17.92■□□□□ 0.46
HLA-DMA-203ENST00000395305 ZNF277Q9NRM2 450 aaPredicted RBP17.92■□□□□ 0.46
HLA-DMA-203ENST00000395305 ABCC4O15439 1325 aa17.92■□□□□ 0.46
HLA-DMA-203ENST00000395305 NEXNQ0ZGT2 675 aa17.91■□□□□ 0.46
HLA-DMA-203ENST00000395305 FLIIQ13045 1269 aa17.91■□□□□ 0.46
HLA-DMA-203ENST00000395305 GRAPQ13588 217 aa17.91■□□□□ 0.46
HLA-DMA-203ENST00000395305 RTL5Q5HYW3 569 aaPredicted RBP17.91■□□□□ 0.46
HLA-DMA-203ENST00000395305 SP8Q8IXZ3 490 aa17.91■□□□□ 0.46
HLA-DMA-203ENST00000395305 GRAPLQ8TC17 118 aaPredicted RBP17.91■□□□□ 0.46
HLA-DMA-203ENST00000395305 SNED1Q8TER0 1413 aa17.9■□□□□ 0.46
HLA-DMA-203ENST00000395305 LAMB2P55268 1798 aa17.9■□□□□ 0.46
HLA-DMA-203ENST00000395305 IGKV5-2P06315 115 aa17.9■□□□□ 0.46
HLA-DMA-203ENST00000395305 VEGFAP15692 232 aaPredicted RBP17.9■□□□□ 0.46
HLA-DMA-203ENST00000395305 IARSP41252 1262 aaKnown RBP17.9■□□□□ 0.46
HLA-DMA-203ENST00000395305 TMC4Q7Z404 712 aa17.9■□□□□ 0.46
HLA-DMA-203ENST00000395305 C16orf71Q8IYS4 520 aaPredicted RBP17.9■□□□□ 0.46
HLA-DMA-203ENST00000395305 VPS33BQ9H267 617 aa17.89■□□□□ 0.45
HLA-DMA-203ENST00000395305 E9PSI1 815 aa17.88■□□□□ 0.45
HLA-DMA-203ENST00000395305 FKBP5Q13451 457 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms