RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 PHRF1Q9P1Y6 1649 aaKnown RBP12.01□□□□□ -0.49
PFDN6-205ENST00000395134 TOPAZ1Q8N9V7 1692 aa12.01□□□□□ -0.49
PFDN6-205ENST00000395134 DKK1O94907 266 aa12.01□□□□□ -0.49
PFDN6-205ENST00000395134 ATP6V1AP38606 617 aa12.01□□□□□ -0.49
PFDN6-205ENST00000395134 ARHGAP4P98171 946 aa12□□□□□ -0.49
PFDN6-205ENST00000395134 FKBP4Q02790 459 aaKnown RBP eCLIP12□□□□□ -0.49
PFDN6-205ENST00000395134 RAD51AP2Q09MP3 1159 aa12□□□□□ -0.49
PFDN6-205ENST00000395134 PPP4R3BQ5MIZ7 849 aa12□□□□□ -0.49
PFDN6-205ENST00000395134 SIX5Q8N196 739 aa12□□□□□ -0.49
PFDN6-205ENST00000395134 GTF3C2Q8WUA4 911 aaPredicted RBP12□□□□□ -0.49
PFDN6-205ENST00000395134 CUEDC1Q9NWM3 386 aaPredicted RBP12□□□□□ -0.49
PFDN6-205ENST00000395134 ATP7BP35670 1465 aa12□□□□□ -0.49
PFDN6-205ENST00000395134 KIAA1210Q9ULL0 1709 aa12□□□□□ -0.49
PFDN6-205ENST00000395134 SF3B2Q13435 895 aaKnown RBP11.99□□□□□ -0.49
PFDN6-205ENST00000395134 LDLRAD1Q5T700 205 aa11.99□□□□□ -0.49
PFDN6-205ENST00000395134 KHSRPQ92945 711 aaKnown RBP eCLIP11.99□□□□□ -0.49
PFDN6-205ENST00000395134 GPRASP1Q5JY77 1395 aa11.99□□□□□ -0.49
PFDN6-205ENST00000395134 QRICH2Q9H0J4 1663 aa11.99□□□□□ -0.49
PFDN6-205ENST00000395134 EIF3AQ14152 1382 aaKnown RBP11.98□□□□□ -0.49
PFDN6-205ENST00000395134 WASLO00401 505 aaPredicted RBP11.98□□□□□ -0.49
PFDN6-205ENST00000395134 TRAF7Q6Q0C0 670 aa11.98□□□□□ -0.49
PFDN6-205ENST00000395134 ZNF662Q6ZS27 426 aa11.98□□□□□ -0.49
PFDN6-205ENST00000395134 SEPT12Q8IYM1 358 aa11.98□□□□□ -0.49
PFDN6-205ENST00000395134 NGDNQ8NEJ9 315 aaKnown RBP11.98□□□□□ -0.49
PFDN6-205ENST00000395134 LNPKQ9C0E8 428 aa11.98□□□□□ -0.49
PFDN6-205ENST00000395134 BRPF3Q9ULD4 1205 aa11.98□□□□□ -0.49
PFDN6-205ENST00000395134 NOD1Q9Y239 953 aa11.98□□□□□ -0.49
PFDN6-205ENST00000395134 POTEFA5A3E0 1075 aa11.97□□□□□ -0.49
PFDN6-205ENST00000395134 FAM83GA6ND36 823 aa11.97□□□□□ -0.49
PFDN6-205ENST00000395134 ZBTB7BO15156 539 aaPredicted RBP11.97□□□□□ -0.49
PFDN6-205ENST00000395134 SEC13P55735 322 aa11.97□□□□□ -0.49
PFDN6-205ENST00000395134 VPS72Q15906 364 aa11.97□□□□□ -0.49
PFDN6-205ENST00000395134 ARSIQ5FYB1 569 aa11.97□□□□□ -0.49
PFDN6-205ENST00000395134 NUTM2GQ5VZR2 741 aa11.97□□□□□ -0.49
PFDN6-205ENST00000395134 DEFB132Q7Z7B7 95 aa11.97□□□□□ -0.49
PFDN6-205ENST00000395134 DNAJC2Q99543 621 aaKnown RBP11.97□□□□□ -0.49
PFDN6-205ENST00000395134 DNMT3AQ9Y6K1 912 aaPredicted RBP11.97□□□□□ -0.49
PFDN6-205ENST00000395134 FAM98CQ17RN3 349 aaKnown RBP11.96□□□□□ -0.49
PFDN6-205ENST00000395134 SLC43A3Q8NBI5 491 aa11.96□□□□□ -0.49
PFDN6-205ENST00000395134 BTG4Q9NY30 223 aa11.96□□□□□ -0.49
PFDN6-205ENST00000395134 TMA7Q9Y2S6 64 aaKnown RBP11.96□□□□□ -0.49
PFDN6-205ENST00000395134 BLMP54132 1417 aaPredicted RBP11.95□□□□□ -0.5
PFDN6-205ENST00000395134 RGPD1P0DJD0 1748 aa11.95□□□□□ -0.5
PFDN6-205ENST00000395134 METTL16Q86W50 562 aaKnown RBP11.95□□□□□ -0.5
PFDN6-205ENST00000395134 TINF2Q9BSI4 451 aa11.95□□□□□ -0.5
PFDN6-205ENST00000395134 TNS1Q9HBL0 1735 aaKnown RBP11.94□□□□□ -0.5
PFDN6-205ENST00000395134 FMNL1O95466 1100 aaPredicted RBP11.94□□□□□ -0.5
PFDN6-205ENST00000395134 CHRNA2Q15822 529 aa11.94□□□□□ -0.5
PFDN6-205ENST00000395134 PROX2Q3B8N5 592 aa11.94□□□□□ -0.5
PFDN6-205ENST00000395134 FAM182BQ5T319 152 aa11.94□□□□□ -0.5
PFDN6-205ENST00000395134 NT5DC4Q86YG4 428 aa11.94□□□□□ -0.5
PFDN6-205ENST00000395134 TMEM87AQ8NBN3 555 aa11.94□□□□□ -0.5
PFDN6-205ENST00000395134 NUDT16Q96DE0 195 aaKnown RBP11.94□□□□□ -0.5
PFDN6-205ENST00000395134 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.94□□□□□ -0.5
PFDN6-205ENST00000395134 PRKAG2Q9UGJ0 569 aa11.94□□□□□ -0.5
PFDN6-205ENST00000395134 SEPT3Q9UH03 358 aa11.94□□□□□ -0.5
PFDN6-205ENST00000395134 KIAA1024Q9UPX6 916 aa11.94□□□□□ -0.5
PFDN6-205ENST00000395134 GPSM3Q9Y4H4 160 aa11.94□□□□□ -0.5
PFDN6-205ENST00000395134 THSD7AQ9UPZ6 1657 aa11.94□□□□□ -0.5
PFDN6-205ENST00000395134 NRKQ7Z2Y5 1582 aa11.93□□□□□ -0.5
PFDN6-205ENST00000395134 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
PFDN6-205ENST00000395134 F12P00748 615 aaPredicted RBP11.93□□□□□ -0.5
PFDN6-205ENST00000395134 P4HBP07237 508 aaKnown RBP11.93□□□□□ -0.5
PFDN6-205ENST00000395134 KRT27Q7Z3Y8 459 aa11.93□□□□□ -0.5
PFDN6-205ENST00000395134 CDK19Q9BWU1 502 aa11.93□□□□□ -0.5
PFDN6-205ENST00000395134 PRDM11Q9NQV5 511 aa11.93□□□□□ -0.5
PFDN6-205ENST00000395134 RBM19Q9Y4C8 960 aaKnown RBP11.93□□□□□ -0.5
PFDN6-205ENST00000395134 PCDHB9Q9Y5E1 797 aa11.93□□□□□ -0.5
PFDN6-205ENST00000395134 KIAA0232Q92628 1395 aa11.92□□□□□ -0.5
PFDN6-205ENST00000395134 KAT6BQ8WYB5 2073 aa11.92□□□□□ -0.5
PFDN6-205ENST00000395134 TLDC2A0PJX2 215 aa11.92□□□□□ -0.5
PFDN6-205ENST00000395134 CFHP08603 1231 aa11.92□□□□□ -0.5
PFDN6-205ENST00000395134 SLC4A3P48751 1232 aa11.92□□□□□ -0.5
PFDN6-205ENST00000395134 NBPF1Q3BBV0 1214 aa11.92□□□□□ -0.5
PFDN6-205ENST00000395134 LHX6Q9UPM6 363 aa11.92□□□□□ -0.5
PFDN6-205ENST00000395134 ATP2B1P20020 1258 aa11.91□□□□□ -0.5
PFDN6-205ENST00000395134 PTK2Q05397 1052 aa11.91□□□□□ -0.5
PFDN6-205ENST00000395134 Q3C1V9 767 aa11.91□□□□□ -0.5
PFDN6-205ENST00000395134 TSGA10IPQ3SY00 556 aa11.91□□□□□ -0.5
PFDN6-205ENST00000395134 DHX37Q8IY37 1157 aaKnown RBP11.91□□□□□ -0.5
PFDN6-205ENST00000395134 DHX38Q92620 1227 aaKnown RBP11.91□□□□□ -0.5
PFDN6-205ENST00000395134 TGIF2Q9GZN2 237 aa11.91□□□□□ -0.5
PFDN6-205ENST00000395134 STRN4Q9NRL3 753 aa11.91□□□□□ -0.5
PFDN6-205ENST00000395134 NLRP2Q9NX02 1062 aa11.91□□□□□ -0.5
PFDN6-205ENST00000395134 KIAA1468Q9P260 1216 aa11.91□□□□□ -0.5
PFDN6-205ENST00000395134 RGPD5Q99666 1765 aa11.9□□□□□ -0.5
PFDN6-205ENST00000395134 MTMR3Q13615 1198 aa11.9□□□□□ -0.5
PFDN6-205ENST00000395134 CCDC102BQ68D86 513 aa11.9□□□□□ -0.5
PFDN6-205ENST00000395134 SLC39A7Q92504 469 aa11.9□□□□□ -0.5
PFDN6-205ENST00000395134 ARMC5Q96C12 935 aa11.9□□□□□ -0.5
PFDN6-205ENST00000395134 RBCK1Q9BYM8 510 aa11.9□□□□□ -0.5
PFDN6-205ENST00000395134 TRPM1Q7Z4N2 1603 aa11.89□□□□□ -0.51
PFDN6-205ENST00000395134 ACEP12821 1306 aa11.89□□□□□ -0.51
PFDN6-205ENST00000395134 SPATA31A5Q5VU36 1347 aa11.89□□□□□ -0.51
PFDN6-205ENST00000395134 SPATA31A7Q8IWB4 1347 aa11.89□□□□□ -0.51
PFDN6-205ENST00000395134 SFI1A8K8P3 1242 aa11.89□□□□□ -0.51
PFDN6-205ENST00000395134 TMC7Q7Z402 723 aa11.89□□□□□ -0.51
PFDN6-205ENST00000395134 METTL5Q9NRN9 209 aaKnown RBP11.89□□□□□ -0.51
PFDN6-205ENST00000395134 PPIP5K1Q6PFW1 1433 aa11.88□□□□□ -0.51
PFDN6-205ENST00000395134 PTCD1O75127 700 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms