RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CFAP53Q96M91 514 aa21.15■□□□□ 0.98
SNCA-205ENST00000394991 GJA3Q9Y6H8 435 aa21.15■□□□□ 0.98
SNCA-205ENST00000394991 RIC1Q4ADV7 1423 aa21.14■□□□□ 0.98
SNCA-205ENST00000394991 U2AF1L5P0DN76 240 aaPredicted RBP21.14■□□□□ 0.97
SNCA-205ENST00000394991 U2AF1Q01081 240 aaKnown RBP eCLIP21.14■□□□□ 0.97
SNCA-205ENST00000394991 EPS15P42566 896 aa21.13■□□□□ 0.97
SNCA-205ENST00000394991 SCNN1DP51172 638 aa21.13■□□□□ 0.97
SNCA-205ENST00000394991 EIF6P56537 245 aaKnown RBP21.13■□□□□ 0.97
SNCA-205ENST00000394991 MAP2K1Q02750 393 aaPredicted RBP21.13■□□□□ 0.97
SNCA-205ENST00000394991 MIS18AQ9NYP9 233 aa21.12■□□□□ 0.97
SNCA-205ENST00000394991 NUDCQ9Y266 331 aa21.12■□□□□ 0.97
SNCA-205ENST00000394991 HTATSF1O43719 755 aaKnown RBP21.11■□□□□ 0.97
SNCA-205ENST00000394991 LMOD1P29536 600 aaPredicted RBP21.11■□□□□ 0.97
SNCA-205ENST00000394991 HOXA10P31260 410 aaPredicted RBP21.11■□□□□ 0.97
SNCA-205ENST00000394991 CC2D2BQ6DHV5 1058 aa21.11■□□□□ 0.97
SNCA-205ENST00000394991 NGEFQ8N5V2 710 aa21.11■□□□□ 0.97
SNCA-205ENST00000394991 CAPNS2Q96L46 248 aa21.11■□□□□ 0.97
SNCA-205ENST00000394991 NYXQ9GZU5 481 aa21.11■□□□□ 0.97
SNCA-205ENST00000394991 IBTKQ9P2D0 1353 aaPredicted RBP21.1■□□□□ 0.97
SNCA-205ENST00000394991 MAP3K15Q6ZN16 1313 aa21.1■□□□□ 0.97
SNCA-205ENST00000394991 UBN2Q6ZU65 1347 aa21.1■□□□□ 0.97
SNCA-205ENST00000394991 TAF7Q15545 349 aaPredicted RBP21.1■□□□□ 0.97
SNCA-205ENST00000394991 FAM161AQ3B820 660 aa21.1■□□□□ 0.97
SNCA-205ENST00000394991 TTLL7Q6ZT98 887 aa21.1■□□□□ 0.97
SNCA-205ENST00000394991 LAMB2P55268 1798 aa21.1■□□□□ 0.97
SNCA-205ENST00000394991 ERVV-1B6SEH8 477 aa21.09■□□□□ 0.97
SNCA-205ENST00000394991 TRAF5O00463 557 aa21.09■□□□□ 0.97
SNCA-205ENST00000394991 GPTP24298 496 aa21.09■□□□□ 0.97
SNCA-205ENST00000394991 CYP4F22Q6NT55 531 aa21.09■□□□□ 0.97
SNCA-205ENST00000394991 LARGE2Q8N3Y3 721 aa21.09■□□□□ 0.97
SNCA-205ENST00000394991 RPGRQ92834 1020 aaKnown RBP21.09■□□□□ 0.97
SNCA-205ENST00000394991 SLC34A2O95436 690 aa21.08■□□□□ 0.97
SNCA-205ENST00000394991 PPP2R1AP30153 589 aa21.08■□□□□ 0.97
SNCA-205ENST00000394991 CST9Q5W186 159 aa21.08■□□□□ 0.97
SNCA-205ENST00000394991 C3orf67Q6ZVT6 689 aa21.08■□□□□ 0.97
SNCA-205ENST00000394991 SUSD4Q5VX71 490 aa21.07■□□□□ 0.96
SNCA-205ENST00000394991 PAXIP1Q6ZW49 1069 aaPredicted RBP21.07■□□□□ 0.96
SNCA-205ENST00000394991 CASP8AP2Q9UKL3 1982 aa21.06■□□□□ 0.96
SNCA-205ENST00000394991 TCERG1O14776 1098 aaKnown RBP21.06■□□□□ 0.96
SNCA-205ENST00000394991 PPEF1O14829 653 aaPredicted RBP21.06■□□□□ 0.96
SNCA-205ENST00000394991 GRM1Q13255 1194 aa21.06■□□□□ 0.96
SNCA-205ENST00000394991 USP50Q70EL3 339 aaPredicted RBP21.06■□□□□ 0.96
SNCA-205ENST00000394991 CRAMP1Q96RY5 1269 aa21.06■□□□□ 0.96
SNCA-205ENST00000394991 ZBTB3Q9H5J0 574 aa21.06■□□□□ 0.96
SNCA-205ENST00000394991 RRP7AQ9Y3A4 280 aaKnown RBP21.06■□□□□ 0.96
SNCA-205ENST00000394991 ANKRD36CQ5JPF3 1778 aa21.05■□□□□ 0.96
SNCA-205ENST00000394991 NTSR2O95665 410 aa21.05■□□□□ 0.96
SNCA-205ENST00000394991 ECE1P42892 770 aa21.05■□□□□ 0.96
SNCA-205ENST00000394991 KIF6Q6ZMV9 814 aa21.05■□□□□ 0.96
SNCA-205ENST00000394991 GPR101Q96P66 508 aaPredicted RBP21.05■□□□□ 0.96
SNCA-205ENST00000394991 TLL2Q9Y6L7 1015 aa21.05■□□□□ 0.96
SNCA-205ENST00000394991 MYL6BP14649 208 aa21.04■□□□□ 0.96
SNCA-205ENST00000394991 EIF4A1P60842 406 aaKnown RBP21.04■□□□□ 0.96
SNCA-205ENST00000394991 GRIPAP1Q4V328 841 aa21.04■□□□□ 0.96
SNCA-205ENST00000394991 NIM1KQ8IY84 436 aa21.04■□□□□ 0.96
SNCA-205ENST00000394991 ZNF34Q8IZ26 560 aa21.04■□□□□ 0.96
SNCA-205ENST00000394991 RBM17Q96I25 401 aaKnown RBP21.04■□□□□ 0.96
SNCA-205ENST00000394991 TSKSQ9UJT2 592 aa21.04■□□□□ 0.96
SNCA-205ENST00000394991 PPIP5K2O43314 1243 aa21.03■□□□□ 0.96
SNCA-205ENST00000394991 AOC2O75106 756 aa21.03■□□□□ 0.96
SNCA-205ENST00000394991 AOC3Q16853 763 aa21.03■□□□□ 0.96
SNCA-205ENST00000394991 TAF1P21675 1872 aa21.03■□□□□ 0.96
SNCA-205ENST00000394991 GPRC5DQ9NZD1 345 aa21.02■□□□□ 0.96
SNCA-205ENST00000394991 CCDC85CA6NKD9 419 aa21.01■□□□□ 0.95
SNCA-205ENST00000394991 GIGYF2Q6Y7W6 1299 aaKnown RBP21.01■□□□□ 0.95
SNCA-205ENST00000394991 BEGAINQ9BUH8 593 aa21.01■□□□□ 0.95
SNCA-205ENST00000394991 ADARB2Q9NS39 739 aaKnown RBP21.01■□□□□ 0.95
SNCA-205ENST00000394991 CXCL9Q07325 125 aa21■□□□□ 0.95
SNCA-205ENST00000394991 PNISRQ8TF01 805 aaKnown RBP21■□□□□ 0.95
SNCA-205ENST00000394991 THUMPD2Q9BTF0 503 aaKnown RBP21■□□□□ 0.95
SNCA-205ENST00000394991 RGS19P49795 217 aa20.99■□□□□ 0.95
SNCA-205ENST00000394991 SAPCD2Q86UD0 394 aa20.99■□□□□ 0.95
SNCA-205ENST00000394991 ATP6V0A2Q9Y487 856 aa20.99■□□□□ 0.95
SNCA-205ENST00000394991 ABCC4O15439 1325 aa20.99■□□□□ 0.95
SNCA-205ENST00000394991 MAP2K2P36507 400 aa20.98■□□□□ 0.95
SNCA-205ENST00000394991 GMPSP49915 693 aaPredicted RBP20.98■□□□□ 0.95
SNCA-205ENST00000394991 LRP10Q7Z4F1 713 aa20.98■□□□□ 0.95
SNCA-205ENST00000394991 GLIS2Q9BZE0 524 aaPredicted RBP20.98■□□□□ 0.95
SNCA-205ENST00000394991 CELF2O95319 508 aaKnown RBP20.97■□□□□ 0.95
SNCA-205ENST00000394991 MLLT1Q03111 559 aaPredicted RBP20.97■□□□□ 0.95
SNCA-205ENST00000394991 PPP1R42Q7Z4L9 355 aa20.97■□□□□ 0.95
SNCA-205ENST00000394991 RTFDC1Q9BY42 306 aaPredicted RBP20.97■□□□□ 0.95
SNCA-205ENST00000394991 VPS33BQ9H267 617 aa20.97■□□□□ 0.95
SNCA-205ENST00000394991 ZNRF3Q9ULT6 936 aa20.97■□□□□ 0.95
SNCA-205ENST00000394991 POLR2AP24928 1970 aaKnown RBP20.97■□□□□ 0.95
SNCA-205ENST00000394991 ERBB4Q15303 1308 aa20.97■□□□□ 0.95
SNCA-205ENST00000394991 DUOX1Q9NRD9 1551 aa20.97■□□□□ 0.95
SNCA-205ENST00000394991 LRRC37AA6NMS7 1700 aa20.96■□□□□ 0.95
SNCA-205ENST00000394991 PARP10Q53GL7 1025 aa20.96■□□□□ 0.95
SNCA-205ENST00000394991 SLC10A5Q5PT55 438 aa20.96■□□□□ 0.95
SNCA-205ENST00000394991 NLRP3Q96P20 1036 aa20.96■□□□□ 0.95
SNCA-205ENST00000394991 PLEKHF1Q96S99 279 aa20.96■□□□□ 0.95
SNCA-205ENST00000394991 PGAP2Q9UHJ9 254 aa20.96■□□□□ 0.95
SNCA-205ENST00000394991 HIRAP54198 1017 aaPredicted RBP20.94■□□□□ 0.94
SNCA-205ENST00000394991 PDIA6Q15084 440 aa20.94■□□□□ 0.94
SNCA-205ENST00000394991 NFE2L2Q16236 605 aa20.94■□□□□ 0.94
SNCA-205ENST00000394991 SUPT20HQ8NEM7 779 aa20.94■□□□□ 0.94
SNCA-205ENST00000394991 TRPM4Q8TD43 1214 aa20.94■□□□□ 0.94
SNCA-205ENST00000394991 MCOLN1Q9GZU1 580 aa20.94■□□□□ 0.94
SNCA-205ENST00000394991 CDHR2Q9BYE9 1310 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms