RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.54■■□□□ 1.2
SIL1-202ENST00000394817 CWC27Q6UX04 472 aaKnown RBP22.53■■□□□ 1.2
SIL1-202ENST00000394817 GOLGA6L3A6NEY3 463 aa22.53■■□□□ 1.2
SIL1-202ENST00000394817 PKP1Q13835 747 aa22.53■■□□□ 1.2
SIL1-202ENST00000394817 COPRSQ9NQ92 184 aa22.53■■□□□ 1.2
SIL1-202ENST00000394817 INTS4Q96HW7 963 aaKnown RBP22.52■■□□□ 1.2
SIL1-202ENST00000394817 SIL1Q9H173 461 aa22.52■■□□□ 1.2
SIL1-202ENST00000394817 ITGB4P16144 1822 aa22.52■■□□□ 1.2
SIL1-202ENST00000394817 NBPF26B4DH59 902 aa22.51■■□□□ 1.19
SIL1-202ENST00000394817 NBPF14Q5TI25 921 aa22.51■■□□□ 1.19
SIL1-202ENST00000394817 NBPF10Q6P3W6 841 aaKnown RBP22.51■■□□□ 1.19
SIL1-202ENST00000394817 KIAA1211Q6ZU35 1233 aa22.51■■□□□ 1.19
SIL1-202ENST00000394817 NBPF15Q8N660 670 aa22.51■■□□□ 1.19
SIL1-202ENST00000394817 RFX5P48382 616 aaPredicted RBP22.51■■□□□ 1.19
SIL1-202ENST00000394817 CASP7P55210 303 aa22.51■■□□□ 1.19
SIL1-202ENST00000394817 UBE3BQ7Z3V4 1068 aa22.51■■□□□ 1.19
SIL1-202ENST00000394817 UPF3BQ9BZI7 483 aaKnown RBP22.51■■□□□ 1.19
SIL1-202ENST00000394817 ISY1Q9ULR0 285 aaKnown RBP22.51■■□□□ 1.19
SIL1-202ENST00000394817 SNX14Q9Y5W7 946 aa22.51■■□□□ 1.19
SIL1-202ENST00000394817 KLHDC4Q8TBB5 520 aa22.5■■□□□ 1.19
SIL1-202ENST00000394817 CCDC8Q9H0W5 538 aaPredicted RBP22.49■■□□□ 1.19
SIL1-202ENST00000394817 TLR7Q9NYK1 1049 aaKnown RBP22.49■■□□□ 1.19
SIL1-202ENST00000394817 NWD2Q9ULI1 1742 aa22.49■■□□□ 1.19
SIL1-202ENST00000394817 A0A087WZG4 1122 aa22.49■■□□□ 1.19
SIL1-202ENST00000394817 HIP1O00291 1037 aa22.49■■□□□ 1.19
SIL1-202ENST00000394817 PTPN12Q05209 780 aaKnown RBP22.49■■□□□ 1.19
SIL1-202ENST00000394817 ZDHHC9Q9Y397 364 aa22.49■■□□□ 1.19
SIL1-202ENST00000394817 ATP5J2-PTCD1G3V325 749 aa22.48■■□□□ 1.19
SIL1-202ENST00000394817 PTCD1O75127 700 aaKnown RBP22.48■■□□□ 1.19
SIL1-202ENST00000394817 SPATA31A1Q5TZJ5 1347 aa22.47■■□□□ 1.19
SIL1-202ENST00000394817 KLHL40Q2TBA0 621 aa22.47■■□□□ 1.19
SIL1-202ENST00000394817 TMOD3Q9NYL9 352 aa22.47■■□□□ 1.19
SIL1-202ENST00000394817 SLIT2O94813 1529 aa22.46■■□□□ 1.19
SIL1-202ENST00000394817 RASEFQ8IZ41 740 aa22.46■■□□□ 1.19
SIL1-202ENST00000394817 TTC14Q96N46 770 aa22.46■■□□□ 1.19
SIL1-202ENST00000394817 SNRKQ9NRH2 765 aa22.46■■□□□ 1.19
SIL1-202ENST00000394817 JARID2Q92833 1246 aaPredicted RBP22.45■■□□□ 1.18
SIL1-202ENST00000394817 KCNB2Q92953 911 aa22.45■■□□□ 1.18
SIL1-202ENST00000394817 KAT6BQ8WYB5 2073 aa22.45■■□□□ 1.18
SIL1-202ENST00000394817 EXOC5O00471 708 aa22.45■■□□□ 1.18
SIL1-202ENST00000394817 MCTP1Q6DN14 999 aa22.45■■□□□ 1.18
SIL1-202ENST00000394817 TTLL7Q6ZT98 887 aa22.45■■□□□ 1.18
SIL1-202ENST00000394817 PIGBQ92521 554 aa22.45■■□□□ 1.18
SIL1-202ENST00000394817 CCDC171Q6TFL3 1326 aa22.44■■□□□ 1.18
SIL1-202ENST00000394817 H7C1W4 665 aa22.44■■□□□ 1.18
SIL1-202ENST00000394817 XRCC6P12956 609 aaKnown RBP eCLIP22.44■■□□□ 1.18
SIL1-202ENST00000394817 PTH1RQ03431 593 aa22.44■■□□□ 1.18
SIL1-202ENST00000394817 NOL8Q76FK4 1167 aaKnown RBP22.44■■□□□ 1.18
SIL1-202ENST00000394817 A1BGP04217 495 aa22.43■■□□□ 1.18
SIL1-202ENST00000394817 TNNI3KQ59H18 835 aa22.43■■□□□ 1.18
SIL1-202ENST00000394817 FPGT-TNNI3KV9GXZ4 949 aa22.43■■□□□ 1.18
SIL1-202ENST00000394817 LRP6O75581 1613 aa22.43■■□□□ 1.18
SIL1-202ENST00000394817 BRD1O95696 1058 aa22.43■■□□□ 1.18
SIL1-202ENST00000394817 MRE11P49959 708 aa22.43■■□□□ 1.18
SIL1-202ENST00000394817 BOLA2Q9H3K6 86 aa22.43■■□□□ 1.18
SIL1-202ENST00000394817 CWC25Q9NXE8 425 aaPredicted RBP22.43■■□□□ 1.18
SIL1-202ENST00000394817 ASAP1Q9ULH1 1129 aa22.43■■□□□ 1.18
SIL1-202ENST00000394817 DOT1LQ8TEK3 1739 aa22.43■■□□□ 1.18
SIL1-202ENST00000394817 SPATA31A5Q5VU36 1347 aa22.42■■□□□ 1.18
SIL1-202ENST00000394817 SPATA31A7Q8IWB4 1347 aa22.42■■□□□ 1.18
SIL1-202ENST00000394817 FOXO4P98177 505 aa22.42■■□□□ 1.18
SIL1-202ENST00000394817 LMBRD1Q9NUN5 540 aa22.42■■□□□ 1.18
SIL1-202ENST00000394817 DBNLQ9UJU6 430 aaKnown RBP22.42■■□□□ 1.18
SIL1-202ENST00000394817 DDX49Q9Y6V7 483 aaKnown RBP22.42■■□□□ 1.18
SIL1-202ENST00000394817 MED23Q9ULK4 1368 aa22.42■■□□□ 1.18
SIL1-202ENST00000394817 TFCP2Q12800 502 aa22.41■■□□□ 1.18
SIL1-202ENST00000394817 NMIQ13287 307 aaPredicted RBP22.41■■□□□ 1.18
SIL1-202ENST00000394817 FAM227BQ96M60 508 aa22.41■■□□□ 1.18
SIL1-202ENST00000394817 RFX7Q2KHR2 1363 aa22.41■■□□□ 1.18
SIL1-202ENST00000394817 ATP5JP18859 108 aa22.41■■□□□ 1.18
SIL1-202ENST00000394817 LMBR1LQ6UX01 489 aa22.41■■□□□ 1.18
SIL1-202ENST00000394817 CCDC191Q8NCU4 936 aa22.41■■□□□ 1.18
SIL1-202ENST00000394817 FSD1Q9BTV5 496 aa22.41■■□□□ 1.18
SIL1-202ENST00000394817 TM6SF1Q9BZW5 370 aa22.41■■□□□ 1.18
SIL1-202ENST00000394817 JCADQ9P266 1359 aa22.4■■□□□ 1.18
SIL1-202ENST00000394817 NECTIN1Q15223 517 aa22.4■■□□□ 1.18
SIL1-202ENST00000394817 AEBP2Q6ZN18 517 aaPredicted RBP22.4■■□□□ 1.18
SIL1-202ENST00000394817 CCDC9Q9Y3X0 531 aaKnown RBP22.4■■□□□ 1.18
SIL1-202ENST00000394817 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.4■■□□□ 1.18
SIL1-202ENST00000394817 AK2P54819 239 aa22.39■■□□□ 1.18
SIL1-202ENST00000394817 ATG3Q9NT62 314 aa22.39■■□□□ 1.18
SIL1-202ENST00000394817 THRAP3Q9Y2W1 955 aaKnown RBP22.39■■□□□ 1.18
SIL1-202ENST00000394817 BCL9O00512 1426 aa22.39■■□□□ 1.17
SIL1-202ENST00000394817 CASTP20810 708 aaKnown RBP22.39■■□□□ 1.17
SIL1-202ENST00000394817 PRPF40BQ6NWY9 871 aaKnown RBP22.39■■□□□ 1.17
SIL1-202ENST00000394817 MAP4K1Q92918 833 aa22.39■■□□□ 1.17
SIL1-202ENST00000394817 C8orf37Q96NL8 207 aa22.39■■□□□ 1.17
SIL1-202ENST00000394817 GRPEL1Q9HAV7 217 aa22.39■■□□□ 1.17
SIL1-202ENST00000394817 A0A0D9SFI3 127 aa22.38■■□□□ 1.17
SIL1-202ENST00000394817 ARXQ96QS3 562 aa22.38■■□□□ 1.17
SIL1-202ENST00000394817 LIMCH1Q9UPQ0 1083 aa22.38■■□□□ 1.17
SIL1-202ENST00000394817 RBM8AQ9Y5S9 174 aaKnown RBP22.38■■□□□ 1.17
SIL1-202ENST00000394817 DDB1Q16531 1140 aa22.37■■□□□ 1.17
SIL1-202ENST00000394817 RUFY3Q7L099 469 aa22.37■■□□□ 1.17
SIL1-202ENST00000394817 CERKQ8TCT0 537 aa22.37■■□□□ 1.17
SIL1-202ENST00000394817 CDCA7Q9BWT1 371 aaPredicted RBP22.37■■□□□ 1.17
SIL1-202ENST00000394817 ZBTB3Q9H5J0 574 aa22.37■■□□□ 1.17
SIL1-202ENST00000394817 VSIG10Q8N0Z9 540 aa22.37■■□□□ 1.17
SIL1-202ENST00000394817 ZSWIM6Q9HCJ5 1215 aa22.37■■□□□ 1.17
SIL1-202ENST00000394817 RPAP1Q9BWH6 1393 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms