RNA–Protein interactions for RNA: ENST00000394805.7

MATR3-201, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-201ENST00000394805 C1orf141Q5JVX7 400 aa10.38□□□□□ -0.75
MATR3-201ENST00000394805 VPS53Q5VIR6 699 aa10.38□□□□□ -0.75
MATR3-201ENST00000394805 CCDC129Q6ZRS4 1044 aa10.38□□□□□ -0.75
MATR3-201ENST00000394805 ZNF710Q8N1W2 664 aa10.38□□□□□ -0.75
MATR3-201ENST00000394805 CCDC94Q9BW85 323 aaPredicted RBP10.38□□□□□ -0.75
MATR3-201ENST00000394805 U2AF2P26368 475 aaKnown RBP eCLIP10.38□□□□□ -0.754e-7■■■■□ 20.7
MATR3-201ENST00000394805 POLA2Q14181 598 aa10.38□□□□□ -0.75
MATR3-201ENST00000394805 EAF2Q96CJ1 260 aaPredicted RBP10.38□□□□□ -0.75
MATR3-201ENST00000394805 CCDC171Q6TFL3 1326 aa10.38□□□□□ -0.75
MATR3-201ENST00000394805 SLC39A6Q13433 755 aa10.38□□□□□ -0.75
MATR3-201ENST00000394805 SSH2Q76I76 1423 aa10.38□□□□□ -0.75
MATR3-201ENST00000394805 TNRQ92752 1358 aa10.38□□□□□ -0.75
MATR3-201ENST00000394805 PRIMPOLQ96LW4 560 aa10.38□□□□□ -0.75
MATR3-201ENST00000394805 ZSCAN31Q96LW9 406 aaPredicted RBP10.38□□□□□ -0.75
MATR3-201ENST00000394805 OVOS2A0A0J9YW53 1432 aa10.37□□□□□ -0.75
MATR3-201ENST00000394805 OVOS2Q6IE36 1432 aa10.37□□□□□ -0.75
MATR3-201ENST00000394805 PSME1Q06323 249 aa10.37□□□□□ -0.75
MATR3-201ENST00000394805 BICC1Q9H694 974 aaKnown RBP10.37□□□□□ -0.75
MATR3-201ENST00000394805 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.37□□□□□ -0.75
MATR3-201ENST00000394805 V9GYY5 206 aaPredicted RBP10.37□□□□□ -0.75
MATR3-201ENST00000394805 NAA30Q147X3 362 aaPredicted RBP10.37□□□□□ -0.75
MATR3-201ENST00000394805 TPD52L1Q16890 204 aaPredicted RBP10.37□□□□□ -0.75
MATR3-201ENST00000394805 FILIP1Q7Z7B0 1213 aa10.37□□□□□ -0.75
MATR3-201ENST00000394805 EVI5LQ96CN4 794 aa10.37□□□□□ -0.75
MATR3-201ENST00000394805 SLC27A2O14975 620 aa10.37□□□□□ -0.75
MATR3-201ENST00000394805 SH2B1Q9NRF2 756 aaPredicted RBP10.37□□□□□ -0.75
MATR3-201ENST00000394805 ST3GAL1Q11201 340 aa10.37□□□□□ -0.75
MATR3-201ENST00000394805 ATP2B3Q16720 1220 aa10.37□□□□□ -0.75
MATR3-201ENST00000394805 ESCO1Q5FWF5 840 aa10.37□□□□□ -0.75
MATR3-201ENST00000394805 FAM200AQ8TCP9 573 aa10.37□□□□□ -0.75
MATR3-201ENST00000394805 ZSWIM6Q9HCJ5 1215 aa10.37□□□□□ -0.75
MATR3-201ENST00000394805 TTC21AQ8NDW8 1320 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 NR1I2O75469 434 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 PSMA5P28066 241 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 RNF20Q5VTR2 975 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 SUCLG2Q96I99 432 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 CBX8Q9HC52 389 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 TMEM2Q9UHN6 1383 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 GOLGA6L19H0YKK7 550 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 HTATSF1O43719 755 aaKnown RBP10.36□□□□□ -0.75
MATR3-201ENST00000394805 ZNF165P49910 485 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 ZNF589Q86UQ0 364 aaPredicted RBP10.36□□□□□ -0.75
MATR3-201ENST00000394805 KIAA1524Q8TCG1 905 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 TRMT1Q9NXH9 659 aaKnown RBP10.36□□□□□ -0.75
MATR3-201ENST00000394805 DBF4Q9UBU7 674 aaPredicted RBP10.36□□□□□ -0.75
MATR3-201ENST00000394805 AOX1Q06278 1338 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 CCT2P78371 535 aaKnown RBP10.36□□□□□ -0.75
MATR3-201ENST00000394805 SEC62Q99442 399 aaKnown RBP10.36□□□□□ -0.75
MATR3-201ENST00000394805 FTOQ9C0B1 505 aaKnown RBP eCLIP10.36□□□□□ -0.75
MATR3-201ENST00000394805 KCNA6P17658 529 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 SLFNL1Q499Z3 407 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 CHST3Q7LGC8 479 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 TMEM87AQ8NBN3 555 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 FMNL2Q96PY5 1086 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 MRVI1Q9Y6F6 885 aa10.36□□□□□ -0.75
MATR3-201ENST00000394805 NEUROD6Q96NK8 337 aa10.35□□□□□ -0.75
MATR3-201ENST00000394805 BECN2A8MW95 431 aa10.35□□□□□ -0.75
MATR3-201ENST00000394805 SYTL4Q96C24 671 aaPredicted RBP10.35□□□□□ -0.75
MATR3-201ENST00000394805 CLIP2Q9UDT6 1046 aa10.35□□□□□ -0.75
MATR3-201ENST00000394805 TNNT1P13805 278 aa10.35□□□□□ -0.75
MATR3-201ENST00000394805 PDCP20941 246 aa10.35□□□□□ -0.75
MATR3-201ENST00000394805 NECTIN1Q15223 517 aa10.35□□□□□ -0.75
MATR3-201ENST00000394805 DDX46Q7L014 1031 aaKnown RBP10.35□□□□□ -0.75
MATR3-201ENST00000394805 BRF1Q92994 677 aa10.35□□□□□ -0.75
MATR3-201ENST00000394805 PPP6R1Q9UPN7 881 aa10.35□□□□□ -0.75
MATR3-201ENST00000394805 TTC41PQ6P2S7 1318 aa10.35□□□□□ -0.75
MATR3-201ENST00000394805 SASH1O94885 1247 aa10.35□□□□□ -0.75
MATR3-201ENST00000394805 ARID5BQ14865 1188 aa10.35□□□□□ -0.75
MATR3-201ENST00000394805 RAB11FIP4Q86YS3 637 aa10.34□□□□□ -0.75
MATR3-201ENST00000394805 ATP5J2-PTCD1G3V325 749 aa10.34□□□□□ -0.75
MATR3-201ENST00000394805 PTCD1O75127 700 aaKnown RBP10.34□□□□□ -0.75
MATR3-201ENST00000394805 RICTORQ6R327 1708 aa10.34□□□□□ -0.75
MATR3-201ENST00000394805 GRM8O00222 908 aa10.34□□□□□ -0.75
MATR3-201ENST00000394805 ERC1Q8IUD2 1116 aa10.34□□□□□ -0.75
MATR3-201ENST00000394805 LEO1Q8WVC0 666 aaPredicted RBP10.34□□□□□ -0.75
MATR3-201ENST00000394805 MYD88Q99836 296 aa10.34□□□□□ -0.75
MATR3-201ENST00000394805 KSR2Q6VAB6 950 aa10.33□□□□□ -0.76
MATR3-201ENST00000394805 Q6ZUG5 572 aa10.33□□□□□ -0.76
MATR3-201ENST00000394805 SIRT1Q96EB6 747 aa10.33□□□□□ -0.76
MATR3-201ENST00000394805 FUCA2Q9BTY2 467 aa10.33□□□□□ -0.76
MATR3-201ENST00000394805 PEAK1Q9H792 1746 aa10.33□□□□□ -0.76
MATR3-201ENST00000394805 USP31Q70CQ4 1352 aa10.33□□□□□ -0.76
MATR3-201ENST00000394805 PLEKHO1Q53GL0 409 aaPredicted RBP10.33□□□□□ -0.76
MATR3-201ENST00000394805 SCAND2PQ9GZW5 306 aaPredicted RBP10.33□□□□□ -0.76
MATR3-201ENST00000394805 KDRP35968 1356 aa10.33□□□□□ -0.76
MATR3-201ENST00000394805 ZNF330Q9Y3S2 320 aaPredicted RBP10.33□□□□□ -0.76
MATR3-201ENST00000394805 RPS6KB1P23443 525 aa10.32□□□□□ -0.76
MATR3-201ENST00000394805 NEXNQ0ZGT2 675 aa10.32□□□□□ -0.76
MATR3-201ENST00000394805 MAP4K1Q92918 833 aa10.32□□□□□ -0.76
MATR3-201ENST00000394805 ZRSR1Q15695 479 aaKnown RBP10.32□□□□□ -0.76
MATR3-201ENST00000394805 NCOA5Q9HCD5 579 aaKnown RBP10.32□□□□□ -0.76
MATR3-201ENST00000394805 ADCY9O60503 1353 aa10.32□□□□□ -0.76
MATR3-201ENST00000394805 RIMBP3CA6NJZ7 1639 aa10.32□□□□□ -0.76
MATR3-201ENST00000394805 RIMBP3BA6NNM3 1639 aa10.32□□□□□ -0.76
MATR3-201ENST00000394805 RIMBP3Q9UFD9 1639 aa10.32□□□□□ -0.76
MATR3-201ENST00000394805 ME1P48163 572 aa10.32□□□□□ -0.76
MATR3-201ENST00000394805 ZC3H6P61129 1189 aaKnown RBP10.32□□□□□ -0.76
MATR3-201ENST00000394805 ISM2Q6H9L7 571 aa10.32□□□□□ -0.76
MATR3-201ENST00000394805 PRDM4Q9UKN5 801 aa10.32□□□□□ -0.76
MATR3-201ENST00000394805 USP16Q9Y5T5 823 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms