RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 SPG7Q9UQ90 795 aa18.67■□□□□ 0.58
PTBP1-204ENST00000394601 PARP4Q9UKK3 1724 aaKnown RBP18.67■□□□□ 0.58
PTBP1-204ENST00000394601 SNRKQ9NRH2 765 aa18.67■□□□□ 0.58
PTBP1-204ENST00000394601 ZC3H6P61129 1189 aaKnown RBP18.67■□□□□ 0.58
PTBP1-204ENST00000394601 ZNF771Q7L3S4 317 aaPredicted RBP18.67■□□□□ 0.58
PTBP1-204ENST00000394601 C9orf78Q9NZ63 289 aaPredicted RBP18.67■□□□□ 0.58
PTBP1-204ENST00000394601 PROSER2Q86WR7 435 aaPredicted RBP18.66■□□□□ 0.58
PTBP1-204ENST00000394601 EAF2Q96CJ1 260 aaPredicted RBP18.66■□□□□ 0.58
PTBP1-204ENST00000394601 ECHDC1Q9NTX5 307 aa18.66■□□□□ 0.58
PTBP1-204ENST00000394601 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.66■□□□□ 0.58
PTBP1-204ENST00000394601 AFDNP55196 1824 aaKnown RBP18.66■□□□□ 0.58
PTBP1-204ENST00000394601 COL9A3Q14050 684 aaPredicted RBP18.66■□□□□ 0.58
PTBP1-204ENST00000394601 LMOD2Q6P5Q4 547 aa18.66■□□□□ 0.58
PTBP1-204ENST00000394601 SASS6Q6UVJ0 657 aa18.66■□□□□ 0.58
PTBP1-204ENST00000394601 LAMB4A4D0S4 1761 aa18.65■□□□□ 0.58
PTBP1-204ENST00000394601 AK2P54819 239 aa18.65■□□□□ 0.58
PTBP1-204ENST00000394601 EPHA10Q5JZY3 1008 aa18.65■□□□□ 0.58
PTBP1-204ENST00000394601 CDK11BP21127 795 aaKnown RBP18.65■□□□□ 0.58
PTBP1-204ENST00000394601 TLR7Q9NYK1 1049 aaKnown RBP18.65■□□□□ 0.58
PTBP1-204ENST00000394601 XIRP1Q702N8 1843 aaKnown RBP18.65■□□□□ 0.58
PTBP1-204ENST00000394601 PLEKHG2Q9H7P9 1386 aa18.65■□□□□ 0.58
PTBP1-204ENST00000394601 NFATC2IPQ8NCF5 419 aa18.65■□□□□ 0.58
PTBP1-204ENST00000394601 NEURL1BA8MQ27 555 aa18.64■□□□□ 0.57
PTBP1-204ENST00000394601 DYNC1I1O14576 645 aa18.64■□□□□ 0.57
PTBP1-204ENST00000394601 ADCK5Q3MIX3 580 aa18.64■□□□□ 0.57
PTBP1-204ENST00000394601 CLASRPQ8N2M8 674 aaKnown RBP18.64■□□□□ 0.57
PTBP1-204ENST00000394601 TRERF1Q96PN7 1200 aa18.64■□□□□ 0.57
PTBP1-204ENST00000394601 DCCP43146 1447 aa18.64■□□□□ 0.57
PTBP1-204ENST00000394601 ST3GAL1Q11201 340 aa18.64■□□□□ 0.57
PTBP1-204ENST00000394601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.64■□□□□ 0.57
PTBP1-204ENST00000394601 LARGE1O95461 756 aa18.63■□□□□ 0.57
PTBP1-204ENST00000394601 NECTIN1Q15223 517 aa18.63■□□□□ 0.57
PTBP1-204ENST00000394601 CCDC94Q9BW85 323 aaPredicted RBP18.63■□□□□ 0.57
PTBP1-204ENST00000394601 CYP27B1O15528 508 aa18.63■□□□□ 0.57
PTBP1-204ENST00000394601 CPA1P15085 419 aa18.63■□□□□ 0.57
PTBP1-204ENST00000394601 ZNF496Q96IT1 587 aaPredicted RBP18.63■□□□□ 0.57
PTBP1-204ENST00000394601 JCADQ9P266 1359 aa18.63■□□□□ 0.57
PTBP1-204ENST00000394601 UBR2Q8IWV8 1755 aa18.63■□□□□ 0.57
PTBP1-204ENST00000394601 ATP2B3Q16720 1220 aa18.63■□□□□ 0.57
PTBP1-204ENST00000394601 KIAA2012Q0VF49 1180 aa18.62■□□□□ 0.57
PTBP1-204ENST00000394601 AIMP1Q12904 312 aaKnown RBP18.62■□□□□ 0.57
PTBP1-204ENST00000394601 CSPP1Q1MSJ5 1256 aa18.62■□□□□ 0.57
PTBP1-204ENST00000394601 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
PTBP1-204ENST00000394601 ERC1Q8IUD2 1116 aa18.62■□□□□ 0.57
PTBP1-204ENST00000394601 PDLIM2Q96JY6 352 aa18.62■□□□□ 0.57
PTBP1-204ENST00000394601 RFX5P48382 616 aaPredicted RBP18.62■□□□□ 0.57
PTBP1-204ENST00000394601 GCKRQ14397 625 aa18.62■□□□□ 0.57
PTBP1-204ENST00000394601 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.62■□□□□ 0.572e-6■■■□□ 15.4
PTBP1-204ENST00000394601 NUP188Q5SRE5 1749 aa18.61■□□□□ 0.57
PTBP1-204ENST00000394601 USP25Q9UHP3 1055 aa18.61■□□□□ 0.57
PTBP1-204ENST00000394601 TMEM94Q12767 1356 aa18.61■□□□□ 0.57
PTBP1-204ENST00000394601 ZSCAN20P17040 1043 aaPredicted RBP18.61■□□□□ 0.57
PTBP1-204ENST00000394601 U2AF2P26368 475 aaKnown RBP eCLIP18.61■□□□□ 0.577e-8■■■□□ 17.9
PTBP1-204ENST00000394601 AACSQ86V21 672 aa18.61■□□□□ 0.57
PTBP1-204ENST00000394601 KLHDC4Q8TBB5 520 aa18.61■□□□□ 0.57
PTBP1-204ENST00000394601 ZSWIM6Q9HCJ5 1215 aa18.61■□□□□ 0.57
PTBP1-204ENST00000394601 USP16Q9Y5T5 823 aa18.61■□□□□ 0.57
PTBP1-204ENST00000394601 COL15A1P39059 1388 aa18.61■□□□□ 0.57
PTBP1-204ENST00000394601 GADD45BO75293 160 aaPredicted RBP18.61■□□□□ 0.57
PTBP1-204ENST00000394601 LRSAM1Q6UWE0 723 aa18.61■□□□□ 0.57
PTBP1-204ENST00000394601 TMEM87AQ8NBN3 555 aa18.61■□□□□ 0.57
PTBP1-204ENST00000394601 XAGE3Q8WTP9 111 aa18.61■□□□□ 0.57
PTBP1-204ENST00000394601 EVI5LQ96CN4 794 aa18.61■□□□□ 0.57
PTBP1-204ENST00000394601 LARP6Q9BRS8 491 aaKnown RBP18.61■□□□□ 0.57
PTBP1-204ENST00000394601 METTL22Q9BUU2 404 aaPredicted RBP18.61■□□□□ 0.57
PTBP1-204ENST00000394601 SPC24Q8NBT2 197 aa18.6■□□□□ 0.57
PTBP1-204ENST00000394601 FAM227BQ96M60 508 aa18.6■□□□□ 0.57
PTBP1-204ENST00000394601 TJP1Q07157 1748 aa18.6■□□□□ 0.57
PTBP1-204ENST00000394601 OS9Q13438 667 aaPredicted RBP18.6■□□□□ 0.57
PTBP1-204ENST00000394601 CCDC39Q9UFE4 941 aa18.6■□□□□ 0.57
PTBP1-204ENST00000394601 PAPPAQ13219 1627 aa18.59■□□□□ 0.57
PTBP1-204ENST00000394601 COPS6Q7L5N1 327 aa18.59■□□□□ 0.57
PTBP1-204ENST00000394601 SHANK3Q9BYB0 1731 aa18.59■□□□□ 0.57
PTBP1-204ENST00000394601 TNS3Q68CZ2 1445 aa18.59■□□□□ 0.57
PTBP1-204ENST00000394601 MAP4K1Q92918 833 aa18.59■□□□□ 0.57
PTBP1-204ENST00000394601 TM6SF1Q9BZW5 370 aa18.59■□□□□ 0.57
PTBP1-204ENST00000394601 LIMCH1Q9UPQ0 1083 aa18.59■□□□□ 0.57
PTBP1-204ENST00000394601 MED23Q9ULK4 1368 aa18.59■□□□□ 0.57
PTBP1-204ENST00000394601 DDX58O95786 925 aaKnown RBP18.58■□□□□ 0.57
PTBP1-204ENST00000394601 MYL6BP14649 208 aa18.58■□□□□ 0.57
PTBP1-204ENST00000394601 LARP1Q6PKG0 1096 aaKnown RBP18.58■□□□□ 0.57
PTBP1-204ENST00000394601 CABLES1Q8TDN4 633 aa18.58■□□□□ 0.57
PTBP1-204ENST00000394601 CCDC171Q6TFL3 1326 aa18.58■□□□□ 0.57
PTBP1-204ENST00000394601 IFIT2P09913 472 aaKnown RBP18.58■□□□□ 0.57
PTBP1-204ENST00000394601 CASP7P55210 303 aa18.58■□□□□ 0.57
PTBP1-204ENST00000394601 DMTNQ08495 405 aa18.58■□□□□ 0.57
PTBP1-204ENST00000394601 CCDC8Q9H0W5 538 aaPredicted RBP18.58■□□□□ 0.57
PTBP1-204ENST00000394601 NLRP2Q9NX02 1062 aa18.58■□□□□ 0.57
PTBP1-204ENST00000394601 CASTP20810 708 aaKnown RBP18.58■□□□□ 0.56
PTBP1-204ENST00000394601 RAPGEF4Q8WZA2 1011 aa18.58■□□□□ 0.56
PTBP1-204ENST00000394601 RABL6Q3YEC7 729 aaPredicted RBP18.57■□□□□ 0.56
PTBP1-204ENST00000394601 VPS53Q5VIR6 699 aa18.57■□□□□ 0.56
PTBP1-204ENST00000394601 CPDO75976 1380 aa18.57■□□□□ 0.56
PTBP1-204ENST00000394601 NMIQ13287 307 aaPredicted RBP18.57■□□□□ 0.56
PTBP1-204ENST00000394601 USP48Q86UV5 1035 aa18.57■□□□□ 0.56
PTBP1-204ENST00000394601 DIAPH3Q9NSV4 1193 aa18.57■□□□□ 0.56
PTBP1-204ENST00000394601 CHMP3Q9Y3E7 222 aa18.57■□□□□ 0.56
PTBP1-204ENST00000394601 TAF6LQ9Y6J9 622 aa18.57■□□□□ 0.56
PTBP1-204ENST00000394601 WDR33Q9C0J8 1336 aaKnown RBP18.57■□□□□ 0.56
PTBP1-204ENST00000394601 A0A0D9SFI3 127 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms