RNA–Protein interactions for RNA: ENST00000394546.6

TRPT1-202, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRPT1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-202ENST00000394546 ZNF219Q9P2Y4 722 aaPredicted RBP24.21■■□□□ 1.47
TRPT1-202ENST00000394546 RIC1Q4ADV7 1423 aa24.2■■□□□ 1.46
TRPT1-202ENST00000394546 CCER2I3L3R5 266 aa24.2■■□□□ 1.46
TRPT1-202ENST00000394546 CRY2Q49AN0 593 aa24.2■■□□□ 1.46
TRPT1-202ENST00000394546 SLC10A5Q5PT55 438 aa24.2■■□□□ 1.46
TRPT1-202ENST00000394546 TSPYL6Q8N831 410 aa24.2■■□□□ 1.46
TRPT1-202ENST00000394546 MYH16Q9H6N6 1097 aa24.2■■□□□ 1.46
TRPT1-202ENST00000394546 TRMT112Q9UI30 125 aaKnown RBP24.2■■□□□ 1.46
TRPT1-202ENST00000394546 RBM17Q96I25 401 aaKnown RBP24.19■■□□□ 1.46
TRPT1-202ENST00000394546 ABCC12Q96J65 1359 aa24.18■■□□□ 1.46
TRPT1-202ENST00000394546 FANCIQ9NVI1 1328 aa24.18■■□□□ 1.46
TRPT1-202ENST00000394546 ZC3H4Q9UPT8 1303 aaKnown RBP24.18■■□□□ 1.46
TRPT1-202ENST00000394546 ZNF526Q8TF50 670 aaPredicted RBP24.18■■□□□ 1.46
TRPT1-202ENST00000394546 COL11A2P13942 1736 aaPredicted RBP24.18■■□□□ 1.46
TRPT1-202ENST00000394546 SH3TC1Q8TE82 1336 aa24.17■■□□□ 1.46
TRPT1-202ENST00000394546 RASSF7Q02833 373 aa24.17■■□□□ 1.46
TRPT1-202ENST00000394546 TRIM28Q13263 835 aaKnown RBP24.17■■□□□ 1.46
TRPT1-202ENST00000394546 PHAXQ9H814 394 aaKnown RBP24.17■■□□□ 1.46
TRPT1-202ENST00000394546 HOXA10P31260 410 aaPredicted RBP24.16■■□□□ 1.46
TRPT1-202ENST00000394546 CCDC93Q567U6 631 aa24.16■■□□□ 1.46
TRPT1-202ENST00000394546 ISCA1Q9BUE6 129 aa24.16■■□□□ 1.46
TRPT1-202ENST00000394546 TAOK3Q9H2K8 898 aa24.16■■□□□ 1.46
TRPT1-202ENST00000394546 NFKBIEO00221 500 aa24.15■■□□□ 1.46
TRPT1-202ENST00000394546 RTKN2Q8IZC4 609 aa24.15■■□□□ 1.46
TRPT1-202ENST00000394546 CRAMP1Q96RY5 1269 aa24.15■■□□□ 1.46
TRPT1-202ENST00000394546 LTBP3Q9NS15 1303 aa24.14■■□□□ 1.46
TRPT1-202ENST00000394546 ATP5J2-PTCD1G3V325 749 aa24.14■■□□□ 1.45
TRPT1-202ENST00000394546 HSP90B1P14625 803 aaKnown RBP24.14■■□□□ 1.45
TRPT1-202ENST00000394546 CC2D2BQ6DHV5 1058 aa24.14■■□□□ 1.45
TRPT1-202ENST00000394546 C7orf43Q8WVR3 580 aa24.14■■□□□ 1.45
TRPT1-202ENST00000394546 TMX4Q9H1E5 349 aaPredicted RBP24.14■■□□□ 1.45
TRPT1-202ENST00000394546 KDM2BQ8NHM5 1336 aa24.13■■□□□ 1.45
TRPT1-202ENST00000394546 GRIPAP1Q4V328 841 aa24.13■■□□□ 1.45
TRPT1-202ENST00000394546 SLC4A2P04920 1241 aa24.12■■□□□ 1.45
TRPT1-202ENST00000394546 EXOSC9Q06265 439 aaKnown RBP24.11■■□□□ 1.45
TRPT1-202ENST00000394546 SLX4Q8IY92 1834 aa24.11■■□□□ 1.45
TRPT1-202ENST00000394546 ANKRD36CQ5JPF3 1778 aa24.11■■□□□ 1.45
TRPT1-202ENST00000394546 HCLS1P14317 486 aaPredicted RBP24.1■■□□□ 1.45
TRPT1-202ENST00000394546 C1QTNF8P60827 252 aa24.1■■□□□ 1.45
TRPT1-202ENST00000394546 NEXNQ0ZGT2 675 aa24.1■■□□□ 1.45
TRPT1-202ENST00000394546 KSR2Q6VAB6 950 aa24.1■■□□□ 1.45
TRPT1-202ENST00000394546 CCDC191Q8NCU4 936 aa24.1■■□□□ 1.45
TRPT1-202ENST00000394546 MYD88Q99836 296 aa24.1■■□□□ 1.45
TRPT1-202ENST00000394546 METTL22Q9BUU2 404 aaPredicted RBP24.1■■□□□ 1.45
TRPT1-202ENST00000394546 ARFGEF2Q9Y6D5 1785 aa24.09■■□□□ 1.45
TRPT1-202ENST00000394546 VAMP4O75379 141 aa24.09■■□□□ 1.45
TRPT1-202ENST00000394546 FKBP4Q02790 459 aaKnown RBP eCLIP24.09■■□□□ 1.45
TRPT1-202ENST00000394546 DDX46Q7L014 1031 aaKnown RBP24.09■■□□□ 1.45
TRPT1-202ENST00000394546 TCERG1O14776 1098 aaKnown RBP24.08■■□□□ 1.45
TRPT1-202ENST00000394546 FAM89AQ96GI7 184 aa24.08■■□□□ 1.45
TRPT1-202ENST00000394546 MAP3K2Q9Y2U5 619 aa24.08■■□□□ 1.45
TRPT1-202ENST00000394546 TNRC6CQ9HCJ0 1690 aaKnown RBP24.08■■□□□ 1.44
TRPT1-202ENST00000394546 PI4KAP2A4QPH2 592 aa24.07■■□□□ 1.44
TRPT1-202ENST00000394546 PPEF1O14829 653 aaPredicted RBP24.07■■□□□ 1.44
TRPT1-202ENST00000394546 BBOX1O75936 387 aa24.07■■□□□ 1.44
TRPT1-202ENST00000394546 DPY19L2Q6NUT2 758 aa24.07■■□□□ 1.44
TRPT1-202ENST00000394546 C3orf67Q6ZVT6 689 aa24.07■■□□□ 1.44
TRPT1-202ENST00000394546 PI4KAP1Q8N8J0 262 aa24.07■■□□□ 1.44
TRPT1-202ENST00000394546 ZBTB38Q8NAP3 1195 aaPredicted RBP24.07■■□□□ 1.44
TRPT1-202ENST00000394546 SPINK5Q9NQ38 1064 aaPredicted RBP24.07■■□□□ 1.44
TRPT1-202ENST00000394546 CWC25Q9NXE8 425 aaPredicted RBP24.07■■□□□ 1.44
TRPT1-202ENST00000394546 ZNF521Q96K83 1311 aa24.07■■□□□ 1.44
TRPT1-202ENST00000394546 SBF1O95248 1867 aa24.07■■□□□ 1.44
TRPT1-202ENST00000394546 DIEXFQ68CQ4 756 aaKnown RBP24.06■■□□□ 1.44
TRPT1-202ENST00000394546 SYNE4Q8N205 404 aa24.06■■□□□ 1.44
TRPT1-202ENST00000394546 E9PSI1 815 aa24.05■■□□□ 1.44
TRPT1-202ENST00000394546 IRS4O14654 1257 aaPredicted RBP24.05■■□□□ 1.44
TRPT1-202ENST00000394546 PRELPP51888 382 aa24.05■■□□□ 1.44
TRPT1-202ENST00000394546 FER1L6Q2WGJ9 1857 aa24.04■■□□□ 1.44
TRPT1-202ENST00000394546 GLTPD2A6NH11 291 aa24.04■■□□□ 1.44
TRPT1-202ENST00000394546 FLIIQ13045 1269 aa24.04■■□□□ 1.44
TRPT1-202ENST00000394546 TMC4Q7Z404 712 aa24.04■■□□□ 1.44
TRPT1-202ENST00000394546 PSMD1Q99460 953 aa24.04■■□□□ 1.44
TRPT1-202ENST00000394546 CACNA1SQ13698 1873 aa24.04■■□□□ 1.44
TRPT1-202ENST00000394546 PCCAP05165 728 aaPredicted RBP24.03■■□□□ 1.44
TRPT1-202ENST00000394546 FKBP5Q13451 457 aaPredicted RBP24.03■■□□□ 1.44
TRPT1-202ENST00000394546 C16orf71Q8IYS4 520 aaPredicted RBP24.03■■□□□ 1.44
TRPT1-202ENST00000394546 ZNF428Q96B54 188 aa24.03■■□□□ 1.44
TRPT1-202ENST00000394546 ATP6V0A2Q9Y487 856 aa24.03■■□□□ 1.44
TRPT1-202ENST00000394546 ABCC4O15439 1325 aa24.03■■□□□ 1.44
TRPT1-202ENST00000394546 KIF3CO14782 793 aa24.02■■□□□ 1.44
TRPT1-202ENST00000394546 GRAPQ13588 217 aa24.02■■□□□ 1.44
TRPT1-202ENST00000394546 SF3B3Q15393 1217 aaKnown RBP24.02■■□□□ 1.44
TRPT1-202ENST00000394546 RTL5Q5HYW3 569 aaPredicted RBP24.02■■□□□ 1.44
TRPT1-202ENST00000394546 GRAPLQ8TC17 118 aaPredicted RBP24.02■■□□□ 1.44
TRPT1-202ENST00000394546 OLFM4Q6UX06 510 aa24.01■■□□□ 1.43
TRPT1-202ENST00000394546 G2E3Q7L622 706 aa24.01■■□□□ 1.43
TRPT1-202ENST00000394546 NMRK2Q9NPI5 230 aa24.01■■□□□ 1.43
TRPT1-202ENST00000394546 ZNF277Q9NRM2 450 aaPredicted RBP24.01■■□□□ 1.43
TRPT1-202ENST00000394546 SP8Q8IXZ3 490 aa24■■□□□ 1.43
TRPT1-202ENST00000394546 IARSP41252 1262 aaKnown RBP23.99■■□□□ 1.43
TRPT1-202ENST00000394546 SUPT20HQ8NEM7 779 aa23.99■■□□□ 1.43
TRPT1-202ENST00000394546 DNAAF4Q8WXU2 420 aa23.99■■□□□ 1.43
TRPT1-202ENST00000394546 JDP2Q8WYK2 163 aa23.99■■□□□ 1.43
TRPT1-202ENST00000394546 PDE8AO60658 829 aa23.98■■□□□ 1.43
TRPT1-202ENST00000394546 TOMM70O94826 608 aa23.98■■□□□ 1.43
TRPT1-202ENST00000394546 VEGFAP15692 232 aaPredicted RBP23.98■■□□□ 1.43
TRPT1-202ENST00000394546 VPS33BQ9H267 617 aa23.98■■□□□ 1.43
TRPT1-202ENST00000394546 RRAGCQ9HB90 399 aa23.98■■□□□ 1.43
TRPT1-202ENST00000394546 IGKV5-2P06315 115 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms