RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 FKBP5Q13451 457 aaPredicted RBP24.28■■□□□ 1.48
PDLIM7-204ENST00000393546 DALRD3Q5D0E6 543 aaKnown RBP24.28■■□□□ 1.48
PDLIM7-204ENST00000393546 MYD88Q99836 296 aa24.28■■□□□ 1.48
PDLIM7-204ENST00000393546 TRMT112Q9UI30 125 aaKnown RBP24.28■■□□□ 1.48
PDLIM7-204ENST00000393546 RNF123Q5XPI4 1314 aa24.28■■□□□ 1.48
PDLIM7-204ENST00000393546 CT47B1P0C2W7 299 aaPredicted RBP24.27■■□□□ 1.48
PDLIM7-204ENST00000393546 ZNF622Q969S3 477 aaKnown RBP eCLIP24.27■■□□□ 1.48
PDLIM7-204ENST00000393546 ANKRD31Q8N7Z5 1873 aa24.27■■□□□ 1.48
PDLIM7-204ENST00000393546 ARFGEF2Q9Y6D5 1785 aa24.26■■□□□ 1.47
PDLIM7-204ENST00000393546 NEXNQ0ZGT2 675 aa24.26■■□□□ 1.47
PDLIM7-204ENST00000393546 ZBED9Q6R2W3 1325 aa24.26■■□□□ 1.47
PDLIM7-204ENST00000393546 KLRG2A4D1S0 409 aaPredicted RBP24.25■■□□□ 1.47
PDLIM7-204ENST00000393546 TTLL6Q8N841 843 aa24.25■■□□□ 1.47
PDLIM7-204ENST00000393546 SRGNP10124 158 aa24.24■■□□□ 1.47
PDLIM7-204ENST00000393546 SLC10A5Q5PT55 438 aa24.24■■□□□ 1.47
PDLIM7-204ENST00000393546 STYK1Q6J9G0 422 aa24.24■■□□□ 1.47
PDLIM7-204ENST00000393546 CCDC191Q8NCU4 936 aa24.24■■□□□ 1.47
PDLIM7-204ENST00000393546 MASTLQ96GX5 879 aa24.24■■□□□ 1.47
PDLIM7-204ENST00000393546 SH3TC1Q8TE82 1336 aa24.24■■□□□ 1.47
PDLIM7-204ENST00000393546 ADCY9O60503 1353 aa24.24■■□□□ 1.47
PDLIM7-204ENST00000393546 ALDH1L2Q3SY69 923 aa24.23■■□□□ 1.47
PDLIM7-204ENST00000393546 MRPL50Q8N5N7 158 aaKnown RBP24.23■■□□□ 1.47
PDLIM7-204ENST00000393546 SSH1Q8WYL5 1049 aa24.23■■□□□ 1.47
PDLIM7-204ENST00000393546 NLRP3Q96P20 1036 aa24.23■■□□□ 1.47
PDLIM7-204ENST00000393546 ABCC12Q96J65 1359 aa24.23■■□□□ 1.47
PDLIM7-204ENST00000393546 BRCA1P38398 1863 aaKnown RBP24.22■■□□□ 1.47
PDLIM7-204ENST00000393546 NPR1P16066 1061 aa24.22■■□□□ 1.47
PDLIM7-204ENST00000393546 DNAAF4Q8WXU2 420 aa24.22■■□□□ 1.47
PDLIM7-204ENST00000393546 CNKSR1Q969H4 720 aa24.22■■□□□ 1.47
PDLIM7-204ENST00000393546 CWC25Q9NXE8 425 aaPredicted RBP24.22■■□□□ 1.47
PDLIM7-204ENST00000393546 RIC1Q4ADV7 1423 aa24.21■■□□□ 1.47
PDLIM7-204ENST00000393546 SYNE4Q8N205 404 aa24.2■■□□□ 1.46
PDLIM7-204ENST00000393546 FAM89AQ96GI7 184 aa24.2■■□□□ 1.46
PDLIM7-204ENST00000393546 DLEC1Q9Y238 1755 aa24.19■■□□□ 1.46
PDLIM7-204ENST00000393546 IGKV5-2P06315 115 aa24.19■■□□□ 1.46
PDLIM7-204ENST00000393546 HCLS1P14317 486 aaPredicted RBP24.19■■□□□ 1.46
PDLIM7-204ENST00000393546 CRY2Q49AN0 593 aa24.19■■□□□ 1.46
PDLIM7-204ENST00000393546 ZBTB38Q8NAP3 1195 aaPredicted RBP24.19■■□□□ 1.46
PDLIM7-204ENST00000393546 ALDH1B1P30837 517 aa24.18■■□□□ 1.46
PDLIM7-204ENST00000393546 RTL5Q5HYW3 569 aaPredicted RBP24.18■■□□□ 1.46
PDLIM7-204ENST00000393546 RPGRQ92834 1020 aaKnown RBP24.18■■□□□ 1.46
PDLIM7-204ENST00000393546 BCL2L13Q9BXK5 485 aa24.18■■□□□ 1.46
PDLIM7-204ENST00000393546 SMC4Q9NTJ3 1288 aa24.18■■□□□ 1.46
PDLIM7-204ENST00000393546 F6X3S4 739 aa24.17■■□□□ 1.46
PDLIM7-204ENST00000393546 PCCAP05165 728 aaPredicted RBP24.17■■□□□ 1.46
PDLIM7-204ENST00000393546 HSP90B1P14625 803 aaKnown RBP24.17■■□□□ 1.46
PDLIM7-204ENST00000393546 ARHGAP27Q6ZUM4 889 aa24.17■■□□□ 1.46
PDLIM7-204ENST00000393546 LINS1Q8NG48 757 aa24.17■■□□□ 1.46
PDLIM7-204ENST00000393546 COL11A2P13942 1736 aaPredicted RBP24.16■■□□□ 1.46
PDLIM7-204ENST00000393546 NEURL1BA8MQ27 555 aa24.16■■□□□ 1.46
PDLIM7-204ENST00000393546 CWF19L2Q2TBE0 894 aaKnown RBP24.16■■□□□ 1.46
PDLIM7-204ENST00000393546 RBM17Q96I25 401 aaKnown RBP24.16■■□□□ 1.46
PDLIM7-204ENST00000393546 PTPRCP08575 1304 aa24.15■■□□□ 1.46
PDLIM7-204ENST00000393546 ARFGEF1Q9Y6D6 1849 aa24.15■■□□□ 1.46
PDLIM7-204ENST00000393546 IRS4O14654 1257 aaPredicted RBP24.15■■□□□ 1.46
PDLIM7-204ENST00000393546 HOXA10P31260 410 aaPredicted RBP24.15■■□□□ 1.46
PDLIM7-204ENST00000393546 C3orf67Q6ZVT6 689 aa24.15■■□□□ 1.46
PDLIM7-204ENST00000393546 GOLGB1Q14789 3259 aaKnown RBP24.15■■□□□ 1.46
PDLIM7-204ENST00000393546 RARSP54136 660 aaKnown RBP24.14■■□□□ 1.45
PDLIM7-204ENST00000393546 PRPF40BQ6NWY9 871 aaKnown RBP24.14■■□□□ 1.45
PDLIM7-204ENST00000393546 ZNF219Q9P2Y4 722 aaPredicted RBP24.14■■□□□ 1.45
PDLIM7-204ENST00000393546 TNRC6CQ9HCJ0 1690 aaKnown RBP24.14■■□□□ 1.45
PDLIM7-204ENST00000393546 SLC4A10Q6U841 1118 aa24.13■■□□□ 1.45
PDLIM7-204ENST00000393546 CRAMP1Q96RY5 1269 aa24.13■■□□□ 1.45
PDLIM7-204ENST00000393546 CHD4Q14839 1912 aa24.12■■□□□ 1.45
PDLIM7-204ENST00000393546 C21orf2O43822 256 aa24.12■■□□□ 1.45
PDLIM7-204ENST00000393546 BRPF1P55201 1214 aaPredicted RBP24.12■■□□□ 1.45
PDLIM7-204ENST00000393546 GCKRQ14397 625 aa24.12■■□□□ 1.45
PDLIM7-204ENST00000393546 BEND3Q5T5X7 828 aa24.12■■□□□ 1.45
PDLIM7-204ENST00000393546 JARID2Q92833 1246 aaPredicted RBP24.12■■□□□ 1.45
PDLIM7-204ENST00000393546 SLX4Q8IY92 1834 aa24.1■■□□□ 1.45
PDLIM7-204ENST00000393546 H7C1W4 665 aa24.1■■□□□ 1.45
PDLIM7-204ENST00000393546 SF3B3Q15393 1217 aaKnown RBP24.1■■□□□ 1.45
PDLIM7-204ENST00000393546 SOGA3Q5TF21 947 aa24.1■■□□□ 1.45
PDLIM7-204ENST00000393546 DDX46Q7L014 1031 aaKnown RBP24.1■■□□□ 1.45
PDLIM7-204ENST00000393546 UTRNP46939 3433 aa24.1■■□□□ 1.45
PDLIM7-204ENST00000393546 CDHR2Q9BYE9 1310 aa24.1■■□□□ 1.45
PDLIM7-204ENST00000393546 PDE8AO60658 829 aa24.09■■□□□ 1.45
PDLIM7-204ENST00000393546 YY1P25490 414 aa24.09■■□□□ 1.45
PDLIM7-204ENST00000393546 SRCIN1Q9C0H9 1055 aa24.09■■□□□ 1.45
PDLIM7-204ENST00000393546 NOB1Q9ULX3 412 aaKnown RBP24.09■■□□□ 1.45
PDLIM7-204ENST00000393546 ALDH1L1O75891 902 aa24.08■■□□□ 1.45
PDLIM7-204ENST00000393546 UBE3BQ7Z3V4 1068 aa24.08■■□□□ 1.45
PDLIM7-204ENST00000393546 C7orf43Q8WVR3 580 aa24.08■■□□□ 1.45
PDLIM7-204ENST00000393546 CACNA1SQ13698 1873 aa24.08■■□□□ 1.45
PDLIM7-204ENST00000393546 DDX60Q8IY21 1712 aaKnown RBP24.07■■□□□ 1.44
PDLIM7-204ENST00000393546 LAMB2P55268 1798 aa24.06■■□□□ 1.44
PDLIM7-204ENST00000393546 BBOX1O75936 387 aa24.06■■□□□ 1.44
PDLIM7-204ENST00000393546 API5Q9BZZ5 524 aaKnown RBP24.06■■□□□ 1.44
PDLIM7-204ENST00000393546 ABCC4O15439 1325 aa24.06■■□□□ 1.44
PDLIM7-204ENST00000393546 KIF16BQ96L93 1317 aa24.06■■□□□ 1.44
PDLIM7-204ENST00000393546 CCDC152Q4G0S7 254 aa24.05■■□□□ 1.44
PDLIM7-204ENST00000393546 CCDC93Q567U6 631 aa24.05■■□□□ 1.44
PDLIM7-204ENST00000393546 TMX4Q9H1E5 349 aaPredicted RBP24.05■■□□□ 1.44
PDLIM7-204ENST00000393546 C9orf78Q9NZ63 289 aaPredicted RBP24.05■■□□□ 1.44
PDLIM7-204ENST00000393546 PPEF1O14829 653 aaPredicted RBP24.04■■□□□ 1.44
PDLIM7-204ENST00000393546 IPO8O15397 1037 aaKnown RBP24.04■■□□□ 1.44
PDLIM7-204ENST00000393546 GRAPQ13588 217 aa24.04■■□□□ 1.44
PDLIM7-204ENST00000393546 CC2D2BQ6DHV5 1058 aa24.04■■□□□ 1.44
PDLIM7-204ENST00000393546 GRAPLQ8TC17 118 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms