RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 SSH1Q8WYL5 1049 aa5.72□□□□□ -1.49
GTDC1-205ENST00000392871 PHACTR3Q96KR7 559 aa5.72□□□□□ -1.49
GTDC1-205ENST00000392871 MYH16Q9H6N6 1097 aa5.72□□□□□ -1.49
GTDC1-205ENST00000392871 PTCH1Q13635 1447 aa5.72□□□□□ -1.49
GTDC1-205ENST00000392871 ANKRD33BA6NCL7 494 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 FAM196BA6NMK8 535 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 ZBBXA8MT70 800 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 LGR5O75473 907 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 TRIM27P14373 513 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 ARID4AP29374 1257 aaPredicted RBP5.71□□□□□ -1.5
GTDC1-205ENST00000392871 DEKP35659 375 aaKnown RBP5.71□□□□□ -1.5
GTDC1-205ENST00000392871 SAMD7Q7Z3H4 446 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 RETREG3Q86VR2 466 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 SLC27A5Q9Y2P5 690 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 ITSN1Q15811 1721 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 TCF3P15923 654 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 LYPD8Q6UX82 237 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 RNF19BQ6ZMZ0 732 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 ANO2Q9NQ90 1003 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 MAP10Q9P2G4 905 aa5.71□□□□□ -1.5
GTDC1-205ENST00000392871 CPSF1Q10570 1443 aaKnown RBP5.71□□□□□ -1.5
GTDC1-205ENST00000392871 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.71□□□□□ -1.5
GTDC1-205ENST00000392871 AKAP12Q02952 1782 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 LMTK3Q96Q04 1460 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 EDC4Q6P2E9 1401 aaKnown RBP5.7□□□□□ -1.5
GTDC1-205ENST00000392871 PSDA5PKW4 1024 aaPredicted RBP5.7□□□□□ -1.5
GTDC1-205ENST00000392871 RASA1P20936 1047 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 TSGA10IPQ3SY00 556 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 PNMA1Q8ND90 353 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 NUDT16Q96DE0 195 aaKnown RBP5.7□□□□□ -1.5
GTDC1-205ENST00000392871 ZNF594Q96JF6 807 aaPredicted RBP5.7□□□□□ -1.5
GTDC1-205ENST00000392871 BIN2Q9UBW5 565 aaPredicted RBP5.7□□□□□ -1.5
GTDC1-205ENST00000392871 USP19O94966 1318 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 DLG5Q8TDM6 1919 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 POTEB2H3BUK9 544 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 HSP90B1P14625 803 aaKnown RBP5.7□□□□□ -1.5
GTDC1-205ENST00000392871 ATP2B4P23634 1241 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 MVPQ14764 893 aaKnown RBP5.7□□□□□ -1.5
GTDC1-205ENST00000392871 GRIPAP1Q4V328 841 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 MORN1Q5T089 497 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 BLOC1S3Q6QNY0 202 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 POTEEQ6S8J3 1075 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 PLEKHM2Q8IWE5 1019 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 FTSJ3Q8IY81 847 aaKnown RBP5.7□□□□□ -1.5
GTDC1-205ENST00000392871 NFATC2IPQ8NCF5 419 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 OCSTAMPQ9BR26 566 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 FKBPLQ9UIM3 349 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 PDZRN3Q9UPQ7 1066 aa5.7□□□□□ -1.5
GTDC1-205ENST00000392871 XRN1Q8IZH2 1706 aaKnown RBP5.69□□□□□ -1.5
GTDC1-205ENST00000392871 CDK12Q9NYV4 1490 aaPredicted RBP5.69□□□□□ -1.5
GTDC1-205ENST00000392871 NRKQ7Z2Y5 1582 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 FAM83GA6ND36 823 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 RNF40O75150 1001 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 CLDN10P78369 228 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 ZNF211Q13398 564 aaPredicted RBP5.69□□□□□ -1.5
GTDC1-205ENST00000392871 ZKSCAN2Q63HK3 967 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 ITPRIPQ8IWB1 547 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 NOB1Q9ULX3 412 aaKnown RBP5.69□□□□□ -1.5
GTDC1-205ENST00000392871 TOPAZ1Q8N9V7 1692 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 PEAK1Q9H792 1746 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 ELL2O00472 640 aaPredicted RBP5.69□□□□□ -1.5
GTDC1-205ENST00000392871 F12P00748 615 aaPredicted RBP5.69□□□□□ -1.5
GTDC1-205ENST00000392871 NEFMP07197 916 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 DCTN1Q14203 1278 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 DESI1Q6ICB0 168 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 DZIP1LQ8IYY4 767 aaKnown RBP5.69□□□□□ -1.5
GTDC1-205ENST00000392871 TMEM57Q8N5G2 664 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 TSPYL6Q8N831 410 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 CLP1Q92989 425 aaKnown RBP5.69□□□□□ -1.5
GTDC1-205ENST00000392871 RABGEF1Q9UJ41 708 aa5.69□□□□□ -1.5
GTDC1-205ENST00000392871 IL13P35225 146 aa5.68□□□□□ -1.5
GTDC1-205ENST00000392871 DPYDQ12882 1025 aa5.68□□□□□ -1.5
GTDC1-205ENST00000392871 FAM200AQ8TCP9 573 aa5.68□□□□□ -1.5
GTDC1-205ENST00000392871 BCL11AQ9H165 835 aa5.68□□□□□ -1.5
GTDC1-205ENST00000392871 KIAA1024Q9UPX6 916 aa5.68□□□□□ -1.5
GTDC1-205ENST00000392871 PRMT3O60678 531 aa5.67□□□□□ -1.5
GTDC1-205ENST00000392871 ATF7IPQ6VMQ6 1270 aa5.67□□□□□ -1.5
GTDC1-205ENST00000392871 PHTF2Q8N3S3 785 aa5.67□□□□□ -1.5
GTDC1-205ENST00000392871 CEP126Q9P2H0 1117 aa5.67□□□□□ -1.5
GTDC1-205ENST00000392871 CDK11BP21127 795 aaKnown RBP5.67□□□□□ -1.5
GTDC1-205ENST00000392871 MTMR3Q13615 1198 aa5.67□□□□□ -1.5
GTDC1-205ENST00000392871 NFE2L2Q16236 605 aa5.67□□□□□ -1.5
GTDC1-205ENST00000392871 DMRTA1Q5VZB9 504 aa5.67□□□□□ -1.5
GTDC1-205ENST00000392871 CAPN12Q6ZSI9 719 aa5.67□□□□□ -1.5
GTDC1-205ENST00000392871 ANKMY2Q8IV38 441 aa5.67□□□□□ -1.5
GTDC1-205ENST00000392871 RGPD8O14715 1765 aaPredicted RBP5.66□□□□□ -1.5
GTDC1-205ENST00000392871 RECKO95980 971 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 ABL1P00519 1130 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 KRT24Q2M2I5 525 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 GAS2L2Q8NHY3 880 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 PMFBP1Q8TBY8 1022 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 COG3Q96JB2 828 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 MBIPQ9NS73 344 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 AXIN2Q9Y2T1 843 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 IL16Q14005 1332 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 CHD2O14647 1828 aaKnown RBP5.66□□□□□ -1.5
GTDC1-205ENST00000392871 OVOS2A0A0J9YW53 1432 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 FAM98CQ17RN3 349 aaKnown RBP5.66□□□□□ -1.5
GTDC1-205ENST00000392871 OVOS2Q6IE36 1432 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 LARP1Q6PKG0 1096 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms