RNA–Protein interactions for RNA: ENST00000392854.4

LYPD6-202, Transcript of LY6/PLAUR domain containing 6, humanhuman

TSL 1 (best)

Gene LYPD6, Length 1,580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD6-202ENST00000392854 CNKSR1Q969H4 720 aa8.48□□□□□ -1.05
LYPD6-202ENST00000392854 MASTLQ96GX5 879 aa8.48□□□□□ -1.05
LYPD6-202ENST00000392854 UBN2Q6ZU65 1347 aa8.48□□□□□ -1.05
LYPD6-202ENST00000392854 CCDC30Q5VVM6 783 aa8.48□□□□□ -1.05
LYPD6-202ENST00000392854 NUTM1Q86Y26 1132 aa8.48□□□□□ -1.05
LYPD6-202ENST00000392854 TSPYL6Q8N831 410 aa8.48□□□□□ -1.05
LYPD6-202ENST00000392854 PLBD2Q8NHP8 589 aa8.48□□□□□ -1.05
LYPD6-202ENST00000392854 IBTKQ9P2D0 1353 aaPredicted RBP8.47□□□□□ -1.05
LYPD6-202ENST00000392854 CCER2I3L3R5 266 aa8.47□□□□□ -1.05
LYPD6-202ENST00000392854 NTSR2O95665 410 aa8.47□□□□□ -1.05
LYPD6-202ENST00000392854 NPR1P16066 1061 aa8.47□□□□□ -1.05
LYPD6-202ENST00000392854 ALDH1B1P30837 517 aa8.47□□□□□ -1.05
LYPD6-202ENST00000392854 ERFEQ4G0M1 354 aa8.47□□□□□ -1.05
LYPD6-202ENST00000392854 UTP14AQ9BVJ6 771 aaKnown RBP8.47□□□□□ -1.05
LYPD6-202ENST00000392854 PHAXQ9H814 394 aaKnown RBP8.47□□□□□ -1.05
LYPD6-202ENST00000392854 ADCY9O60503 1353 aa8.46□□□□□ -1.06
LYPD6-202ENST00000392854 C21orf2O43822 256 aa8.46□□□□□ -1.06
LYPD6-202ENST00000392854 TWISTNBQ3B726 338 aaPredicted RBP8.46□□□□□ -1.06
LYPD6-202ENST00000392854 CRY2Q49AN0 593 aa8.46□□□□□ -1.06
LYPD6-202ENST00000392854 SLC10A5Q5PT55 438 aa8.46□□□□□ -1.06
LYPD6-202ENST00000392854 NLRP10Q86W26 655 aa8.46□□□□□ -1.06
LYPD6-202ENST00000392854 REM2Q8IYK8 340 aaPredicted RBP8.46□□□□□ -1.06
LYPD6-202ENST00000392854 SP7Q8TDD2 431 aaPredicted RBP8.46□□□□□ -1.06
LYPD6-202ENST00000392854 COL11A2P13942 1736 aaPredicted RBP8.45□□□□□ -1.06
LYPD6-202ENST00000392854 RIC1Q4ADV7 1423 aa8.45□□□□□ -1.06
LYPD6-202ENST00000392854 RNF123Q5XPI4 1314 aa8.45□□□□□ -1.06
LYPD6-202ENST00000392854 GOLGA2Q08379 1002 aa8.45□□□□□ -1.06
LYPD6-202ENST00000392854 SOGA3Q5TF21 947 aa8.45□□□□□ -1.06
LYPD6-202ENST00000392854 C9orf131Q5VYM1 1079 aa8.45□□□□□ -1.06
LYPD6-202ENST00000392854 PRPF40BQ6NWY9 871 aaKnown RBP8.45□□□□□ -1.06
LYPD6-202ENST00000392854 RIC3Q7Z5B4 369 aa8.45□□□□□ -1.06
LYPD6-202ENST00000392854 NLRP3Q96P20 1036 aa8.45□□□□□ -1.06
LYPD6-202ENST00000392854 ABCC12Q96J65 1359 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 FANCIQ9NVI1 1328 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 SLX4Q8IY92 1834 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 VAMP4O75379 141 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 LMNB1P20700 586 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 HOXA10P31260 410 aaPredicted RBP8.44□□□□□ -1.06
LYPD6-202ENST00000392854 TRIM28Q13263 835 aaKnown RBP8.44□□□□□ -1.06
LYPD6-202ENST00000392854 C7orf43Q8WVR3 580 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 ISCA1Q9BUE6 129 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 STK31Q9BXU1 1019 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 MYH16Q9H6N6 1097 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 GPBP1L1Q9HC44 474 aaPredicted RBP8.44□□□□□ -1.06
LYPD6-202ENST00000392854 RNF181Q9P0P0 153 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 TRMT112Q9UI30 125 aaKnown RBP8.44□□□□□ -1.06
LYPD6-202ENST00000392854 ANKRD36CQ5JPF3 1778 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 SBF1O95248 1867 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 ZNF521Q96K83 1311 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 ATP5J2-PTCD1G3V325 749 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 NFKBIEO00221 500 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 DDX58O95786 925 aaKnown RBP8.44□□□□□ -1.06
LYPD6-202ENST00000392854 RASSF7Q02833 373 aa8.44□□□□□ -1.06
LYPD6-202ENST00000392854 EXOSC9Q06265 439 aaKnown RBP8.44□□□□□ -1.06
LYPD6-202ENST00000392854 RPGRQ92834 1020 aaKnown RBP8.44□□□□□ -1.06
LYPD6-202ENST00000392854 SH3TC1Q8TE82 1336 aa8.43□□□□□ -1.06
LYPD6-202ENST00000392854 LTBP3Q9NS15 1303 aa8.43□□□□□ -1.06
LYPD6-202ENST00000392854 PRELPP51888 382 aa8.43□□□□□ -1.06
LYPD6-202ENST00000392854 DIEXFQ68CQ4 756 aaKnown RBP8.43□□□□□ -1.06
LYPD6-202ENST00000392854 KSR2Q6VAB6 950 aa8.43□□□□□ -1.06
LYPD6-202ENST00000392854 SYNE4Q8N205 404 aa8.43□□□□□ -1.06
LYPD6-202ENST00000392854 ZNF526Q8TF50 670 aaPredicted RBP8.43□□□□□ -1.06
LYPD6-202ENST00000392854 RBM17Q96I25 401 aaKnown RBP8.43□□□□□ -1.06
LYPD6-202ENST00000392854 CRAMP1Q96RY5 1269 aa8.43□□□□□ -1.06
LYPD6-202ENST00000392854 METTL22Q9BUU2 404 aaPredicted RBP8.43□□□□□ -1.06
LYPD6-202ENST00000392854 ARFGEF2Q9Y6D5 1785 aa8.43□□□□□ -1.06
LYPD6-202ENST00000392854 CACNA1SQ13698 1873 aa8.42□□□□□ -1.06
LYPD6-202ENST00000392854 FER1L6Q2WGJ9 1857 aa8.42□□□□□ -1.06
LYPD6-202ENST00000392854 PI4KAP2A4QPH2 592 aa8.42□□□□□ -1.06
LYPD6-202ENST00000392854 TCERG1O14776 1098 aaKnown RBP8.42□□□□□ -1.06
LYPD6-202ENST00000392854 HCLS1P14317 486 aaPredicted RBP8.42□□□□□ -1.06
LYPD6-202ENST00000392854 CCDC93Q567U6 631 aa8.42□□□□□ -1.06
LYPD6-202ENST00000392854 C3orf67Q6ZVT6 689 aa8.42□□□□□ -1.06
LYPD6-202ENST00000392854 RTKN2Q8IZC4 609 aa8.42□□□□□ -1.06
LYPD6-202ENST00000392854 PI4KAP1Q8N8J0 262 aa8.42□□□□□ -1.06
LYPD6-202ENST00000392854 CCDC191Q8NCU4 936 aa8.42□□□□□ -1.06
LYPD6-202ENST00000392854 FAM89AQ96GI7 184 aa8.42□□□□□ -1.06
LYPD6-202ENST00000392854 MYD88Q99836 296 aa8.42□□□□□ -1.06
LYPD6-202ENST00000392854 TAOK3Q9H2K8 898 aa8.42□□□□□ -1.06
LYPD6-202ENST00000392854 MAP3K2Q9Y2U5 619 aa8.42□□□□□ -1.06
LYPD6-202ENST00000392854 TNRC6CQ9HCJ0 1690 aaKnown RBP8.42□□□□□ -1.06
LYPD6-202ENST00000392854 ZC3H4Q9UPT8 1303 aaKnown RBP8.41□□□□□ -1.06
LYPD6-202ENST00000392854 CCDC88AQ3V6T2 1871 aa8.41□□□□□ -1.06
LYPD6-202ENST00000392854 GRIPAP1Q4V328 841 aa8.41□□□□□ -1.06
LYPD6-202ENST00000392854 CC2D2BQ6DHV5 1058 aa8.41□□□□□ -1.06
LYPD6-202ENST00000392854 G2E3Q7L622 706 aa8.41□□□□□ -1.06
LYPD6-202ENST00000392854 ZBTB38Q8NAP3 1195 aaPredicted RBP8.41□□□□□ -1.06
LYPD6-202ENST00000392854 ZNF428Q96B54 188 aa8.41□□□□□ -1.06
LYPD6-202ENST00000392854 CACNA1FO60840 1977 aa8.4□□□□□ -1.06
LYPD6-202ENST00000392854 E9PSI1 815 aa8.4□□□□□ -1.06
LYPD6-202ENST00000392854 BBOX1O75936 387 aa8.4□□□□□ -1.06
LYPD6-202ENST00000392854 HSP90B1P14625 803 aaKnown RBP8.4□□□□□ -1.06
LYPD6-202ENST00000392854 C1QTNF8P60827 252 aa8.4□□□□□ -1.06
LYPD6-202ENST00000392854 FKBP4Q02790 459 aaKnown RBP eCLIP8.4□□□□□ -1.06
LYPD6-202ENST00000392854 NEXNQ0ZGT2 675 aa8.4□□□□□ -1.06
LYPD6-202ENST00000392854 FLIIQ13045 1269 aa8.4□□□□□ -1.06
LYPD6-202ENST00000392854 SF3B3Q15393 1217 aaKnown RBP8.4□□□□□ -1.06
LYPD6-202ENST00000392854 OLFM4Q6UX06 510 aa8.4□□□□□ -1.06
LYPD6-202ENST00000392854 KDM2BQ8NHM5 1336 aa8.4□□□□□ -1.07
LYPD6-202ENST00000392854 GLTPD2A6NH11 291 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms