RNA–Protein interactions for RNA: ENST00000392645.6

ATXN2-204, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-204ENST00000392645 EP400Q96L91 3159 aa17.4■□□□□ 0.38
ATXN2-204ENST00000392645 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
ATXN2-204ENST00000392645 SNRKQ9NRH2 765 aa17.4■□□□□ 0.38
ATXN2-204ENST00000392645 DBNLQ9UJU6 430 aaKnown RBP17.4■□□□□ 0.38
ATXN2-204ENST00000392645 FOSBP53539 338 aa17.39■□□□□ 0.38
ATXN2-204ENST00000392645 LRRC24Q50LG9 513 aa17.39■□□□□ 0.38
ATXN2-204ENST00000392645 CCDC83Q8IWF9 413 aa17.39■□□□□ 0.38
ATXN2-204ENST00000392645 CAMTA1Q9Y6Y1 1673 aa17.39■□□□□ 0.38
ATXN2-204ENST00000392645 FAM89AQ96GI7 184 aa17.39■□□□□ 0.37
ATXN2-204ENST00000392645 USP54Q70EL1 1684 aa17.39■□□□□ 0.37
ATXN2-204ENST00000392645 HSPA4P34932 840 aa17.39■□□□□ 0.37
ATXN2-204ENST00000392645 CIZ1Q9ULV3 898 aaPredicted RBP17.39■□□□□ 0.37
ATXN2-204ENST00000392645 PXDNLA1KZ92 1463 aa17.38■□□□□ 0.37
ATXN2-204ENST00000392645 A0A0G2JLW4 131 aa17.38■□□□□ 0.37
ATXN2-204ENST00000392645 PTPN12Q05209 780 aaKnown RBP17.38■□□□□ 0.37
ATXN2-204ENST00000392645 MPNDQ8N594 471 aa17.38■□□□□ 0.37
ATXN2-204ENST00000392645 ALS2Q96Q42 1657 aa17.38■□□□□ 0.37
ATXN2-204ENST00000392645 WDR17Q8IZU2 1322 aa17.38■□□□□ 0.37
ATXN2-204ENST00000392645 IL2RBP14784 551 aa17.38■□□□□ 0.37
ATXN2-204ENST00000392645 HSP90AB4PQ58FF6 505 aa17.38■□□□□ 0.37
ATXN2-204ENST00000392645 DNAJC10Q8IXB1 793 aa17.38■□□□□ 0.37
ATXN2-204ENST00000392645 GRPEL1Q9HAV7 217 aa17.38■□□□□ 0.37
ATXN2-204ENST00000392645 RUFY3Q7L099 469 aa17.37■□□□□ 0.37
ATXN2-204ENST00000392645 GPT2Q8TD30 523 aa17.37■□□□□ 0.37
ATXN2-204ENST00000392645 RAD50Q92878 1312 aa17.37■□□□□ 0.37
ATXN2-204ENST00000392645 NUTM2BA6NNL0 878 aaPredicted RBP17.37■□□□□ 0.37
ATXN2-204ENST00000392645 NUTM2EB1AL46 878 aaPredicted RBP17.37■□□□□ 0.37
ATXN2-204ENST00000392645 GOLGA6L22H0YM25 854 aa17.37■□□□□ 0.37
ATXN2-204ENST00000392645 SMIM5Q71RC9 77 aa17.37■□□□□ 0.37
ATXN2-204ENST00000392645 NUTM2AQ8IVF1 878 aaPredicted RBP17.37■□□□□ 0.37
ATXN2-204ENST00000392645 GADD45BO75293 160 aaPredicted RBP17.36■□□□□ 0.37
ATXN2-204ENST00000392645 KCNQ4P56696 695 aa17.36■□□□□ 0.37
ATXN2-204ENST00000392645 RNF214Q8ND24 703 aa17.36■□□□□ 0.37
ATXN2-204ENST00000392645 ACSBG1Q96GR2 724 aa17.36■□□□□ 0.37
ATXN2-204ENST00000392645 NCAPD2Q15021 1401 aa17.36■□□□□ 0.37
ATXN2-204ENST00000392645 FAM173BQ6P4H8 233 aa17.36■□□□□ 0.37
ATXN2-204ENST00000392645 LMBRD1Q9NUN5 540 aa17.36■□□□□ 0.37
ATXN2-204ENST00000392645 RBM8AQ9Y5S9 174 aaKnown RBP17.36■□□□□ 0.37
ATXN2-204ENST00000392645 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.35■□□□□ 0.37
ATXN2-204ENST00000392645 MTX1Q13505 466 aa17.35■□□□□ 0.37
ATXN2-204ENST00000392645 FERMT3Q86UX7 667 aa17.35■□□□□ 0.37
ATXN2-204ENST00000392645 GPATCH3Q96I76 525 aa17.35■□□□□ 0.37
ATXN2-204ENST00000392645 RRAGDQ9NQL2 400 aaPredicted RBP17.35■□□□□ 0.37
ATXN2-204ENST00000392645 GOLIM4O00461 696 aa17.34■□□□□ 0.37
ATXN2-204ENST00000392645 NUCB2P80303 420 aa17.34■□□□□ 0.37
ATXN2-204ENST00000392645 PI16Q6UXB8 463 aa17.34■□□□□ 0.37
ATXN2-204ENST00000392645 PIGBQ92521 554 aa17.34■□□□□ 0.37
ATXN2-204ENST00000392645 TMOD3Q9NYL9 352 aa17.34■□□□□ 0.37
ATXN2-204ENST00000392645 NAP1L2Q9ULW6 460 aaPredicted RBP17.34■□□□□ 0.37
ATXN2-204ENST00000392645 SYCE3A1L190 88 aa17.33■□□□□ 0.36
ATXN2-204ENST00000392645 FSD2A1L4K1 749 aa17.33■□□□□ 0.36
ATXN2-204ENST00000392645 TNNI3KQ59H18 835 aa17.33■□□□□ 0.36
ATXN2-204ENST00000392645 CHST3Q7LGC8 479 aa17.33■□□□□ 0.36
ATXN2-204ENST00000392645 TBC1D2BQ9UPU7 963 aa17.33■□□□□ 0.36
ATXN2-204ENST00000392645 FPGT-TNNI3KV9GXZ4 949 aa17.33■□□□□ 0.36
ATXN2-204ENST00000392645 SNAP23O00161 211 aa17.33■□□□□ 0.36
ATXN2-204ENST00000392645 CYP2E1P05181 493 aaPredicted RBP17.33■□□□□ 0.36
ATXN2-204ENST00000392645 PCDH11XQ9BZA7 1347 aa17.32■□□□□ 0.36
ATXN2-204ENST00000392645 PCDH11YQ9BZA8 1340 aa17.32■□□□□ 0.36
ATXN2-204ENST00000392645 RFX5P48382 616 aaPredicted RBP17.32■□□□□ 0.36
ATXN2-204ENST00000392645 PHRF1Q9P1Y6 1649 aaKnown RBP17.32■□□□□ 0.36
ATXN2-204ENST00000392645 VPS37CA5D8V6 355 aaPredicted RBP17.32■□□□□ 0.36
ATXN2-204ENST00000392645 HLFQ16534 295 aa17.32■□□□□ 0.36
ATXN2-204ENST00000392645 L1TD1Q5T7N2 865 aaKnown RBP17.32■□□□□ 0.36
ATXN2-204ENST00000392645 VPS53Q5VIR6 699 aa17.32■□□□□ 0.36
ATXN2-204ENST00000392645 TTC41PQ6P2S7 1318 aa17.32■□□□□ 0.36
ATXN2-204ENST00000392645 PIP4K2BP78356 416 aa17.31■□□□□ 0.36
ATXN2-204ENST00000392645 FKBP4Q02790 459 aaKnown RBP eCLIP17.31■□□□□ 0.36
ATXN2-204ENST00000392645 ERC1Q8IUD2 1116 aa17.31■□□□□ 0.36
ATXN2-204ENST00000392645 PLBD2Q8NHP8 589 aa17.31■□□□□ 0.36
ATXN2-204ENST00000392645 EVI5LQ96CN4 794 aa17.31■□□□□ 0.36
ATXN2-204ENST00000392645 PDRG1Q9NUG6 133 aa17.31■□□□□ 0.36
ATXN2-204ENST00000392645 CNPY2Q9Y2B0 182 aa17.31■□□□□ 0.36
ATXN2-204ENST00000392645 UTRNP46939 3433 aa17.31■□□□□ 0.36
ATXN2-204ENST00000392645 FIBPO43427 364 aa17.31■□□□□ 0.36
ATXN2-204ENST00000392645 CREB3L3Q68CJ9 461 aa17.31■□□□□ 0.36
ATXN2-204ENST00000392645 TMEM63CQ9P1W3 806 aa17.31■□□□□ 0.36
ATXN2-204ENST00000392645 SCN11AQ9UI33 1791 aa17.31■□□□□ 0.36
ATXN2-204ENST00000392645 CHMP4AQ9BY43 222 aa17.3■□□□□ 0.36
ATXN2-204ENST00000392645 CCDC171Q6TFL3 1326 aa17.3■□□□□ 0.36
ATXN2-204ENST00000392645 COL18A1P39060 1754 aa17.3■□□□□ 0.36
ATXN2-204ENST00000392645 FOXO4P98177 505 aa17.3■□□□□ 0.36
ATXN2-204ENST00000392645 ZSCAN23Q3MJ62 389 aa17.3■□□□□ 0.36
ATXN2-204ENST00000392645 RAB11FIP4Q86YS3 637 aa17.3■□□□□ 0.36
ATXN2-204ENST00000392645 TCHHQ07283 1943 aa17.3■□□□□ 0.36
ATXN2-204ENST00000392645 TUBGCP6Q96RT7 1819 aa17.3■□□□□ 0.36
ATXN2-204ENST00000392645 KIF1AQ12756 1690 aa17.3■□□□□ 0.36
ATXN2-204ENST00000392645 KDM4AO75164 1064 aa17.29■□□□□ 0.36
ATXN2-204ENST00000392645 ADORA1P30542 326 aa17.29■□□□□ 0.36
ATXN2-204ENST00000392645 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
ATXN2-204ENST00000392645 CWC25Q9NXE8 425 aaPredicted RBP17.29■□□□□ 0.36
ATXN2-204ENST00000392645 COL15A1P39059 1388 aa17.29■□□□□ 0.36
ATXN2-204ENST00000392645 ME3Q16798 604 aa17.29■□□□□ 0.36
ATXN2-204ENST00000392645 HELBQ8NG08 1087 aaPredicted RBP17.29■□□□□ 0.36
ATXN2-204ENST00000392645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.29■□□□□ 0.363e-7■■■□□ 15.7
ATXN2-204ENST00000392645 COL5A2P05997 1499 aaPredicted RBP17.29■□□□□ 0.36
ATXN2-204ENST00000392645 SIPA1L3O60292 1781 aaPredicted RBP17.29■□□□□ 0.36
ATXN2-204ENST00000392645 TPCN1Q9ULQ1 816 aa17.29■□□□□ 0.36
ATXN2-204ENST00000392645 SLC27A2O14975 620 aa17.28■□□□□ 0.36
ATXN2-204ENST00000392645 AOX1Q06278 1338 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms