RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 SUPT20HQ8NEM7 779 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 EXOC6Q8TAG9 804 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 NUDT16Q96DE0 195 aaKnown RBP4.57□□□□□ -1.68
UBR3-202ENST00000392632 PPP1R9BQ96SB3 815 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 NCAPGQ9BPX3 1015 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 CCDC113Q9H0I3 377 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 RMND1Q9NWS8 449 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 TFCP2L1Q9NZI6 479 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 M0QZ92 97 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 DYNC1I1O14576 645 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 BRD4O60885 1362 aaPredicted RBP4.57□□□□□ -1.68
UBR3-202ENST00000392632 STK3Q13188 491 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 KIAA0753Q2KHM9 967 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 HS2ST1Q7LGA3 356 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 TXNDC16Q9P2K2 825 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 ANAPC4Q9UJX5 808 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 GOLGA8AA7E2F4 631 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 GOLGA8BA8MQT2 603 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 SFPQP23246 707 aaKnown RBP eCLIP4.57□□□□□ -1.68
UBR3-202ENST00000392632 DPY19L2Q6NUT2 758 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 CERS3Q8IU89 383 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 SMARCC2Q8TAQ2 1214 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 UBXN4Q92575 508 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 FAM107BQ9H098 131 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 PICK1Q9NRD5 415 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 OPA1O60313 960 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 KIF4BQ2VIQ3 1234 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 MAP7D1Q3KQU3 841 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 GSDMBQ8TAX9 411 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 CCDC110Q8TBZ0 833 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 SPAG5Q96R06 1193 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 KRT23Q9C075 422 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 CWC25Q9NXE8 425 aaPredicted RBP4.56□□□□□ -1.68
UBR3-202ENST00000392632 CIZ1Q9ULV3 898 aaPredicted RBP4.56□□□□□ -1.68
UBR3-202ENST00000392632 RTCBQ9Y3I0 505 aaKnown RBP4.56□□□□□ -1.68
UBR3-202ENST00000392632 ARHGAP5Q13017 1502 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 SPDYE3A6NKU9 549 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 POTEB2H3BUK9 544 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 NR1I2O75469 434 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 CALML3P27482 149 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 SPAG1Q07617 926 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 UBE4AQ14139 1066 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 DDB1Q16531 1140 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 KRT28Q7Z3Y7 464 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 CCDC85AQ96PX6 553 aaPredicted RBP4.56□□□□□ -1.68
UBR3-202ENST00000392632 HAUS7Q99871 368 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 GLT8D2Q9H1C3 349 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 CCDC171Q6TFL3 1326 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 TMCO5BA8MYB1 307 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 FOXO3O43524 673 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 ATP2A2P16615 1042 aaKnown RBP4.56□□□□□ -1.68
UBR3-202ENST00000392632 IARSP41252 1262 aaKnown RBP4.56□□□□□ -1.68
UBR3-202ENST00000392632 CKAP4Q07065 602 aaKnown RBP4.56□□□□□ -1.68
UBR3-202ENST00000392632 RBM26Q5T8P6 1007 aaKnown RBP4.56□□□□□ -1.68
UBR3-202ENST00000392632 MFSD6Q6ZSS7 791 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 TTC6Q86TZ1 520 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 CCDC155Q8N6L0 562 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 RNF214Q8ND24 703 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 ANKRD2Q9GZV1 360 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 CNNM2Q9H8M5 875 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 USP25Q9UHP3 1055 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 PNMA2Q9UL42 364 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 MAST3O60307 1309 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 TTC16Q8NEE8 873 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 NSMCE1Q8WV22 266 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 ESR2Q92731 530 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 DDX11Q96FC9 970 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 MYD88Q99836 296 aa4.56□□□□□ -1.68
UBR3-202ENST00000392632 CCDC94Q9BW85 323 aaPredicted RBP4.56□□□□□ -1.68
UBR3-202ENST00000392632 GIPC1O14908 333 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 CAVIN2O95810 425 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 SNRPA1P09661 255 aaKnown RBP4.55□□□□□ -1.68
UBR3-202ENST00000392632 ALDH3A1P30838 453 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 PABPC4Q13310 644 aaKnown RBP eCLIP4.55□□□□□ -1.68
UBR3-202ENST00000392632 PLS1Q14651 629 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 MAP3K11Q16584 847 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 CCDC125Q86Z20 511 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 FAM200AQ8TCP9 573 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 LMBR1Q8WVP7 490 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 DNAAF4Q8WXU2 420 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 JAKMIP2Q96AA8 810 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 NOX5Q96PH1 765 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 RAB3IPQ96QF0 476 aaPredicted RBP4.55□□□□□ -1.68
UBR3-202ENST00000392632 VEZTQ9HBM0 779 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 PRKAG2Q9UGJ0 569 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 STX8Q9UNK0 236 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 FAM169AQ9Y6X4 670 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 CCDC88BA6NC98 1476 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 TTC21BQ7Z4L5 1316 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 ATP5J2-PTCD1G3V325 749 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 PRPF40AO75400 957 aaKnown RBP4.55□□□□□ -1.68
UBR3-202ENST00000392632 XPCQ01831 940 aaPredicted RBP4.55□□□□□ -1.68
UBR3-202ENST00000392632 SMC1BQ8NDV3 1235 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 CCT6BQ92526 530 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 CCDC102AQ96A19 550 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 LRRC59Q96AG4 307 aaKnown RBP4.55□□□□□ -1.68
UBR3-202ENST00000392632 STMN4Q9H169 189 aaPredicted RBP4.55□□□□□ -1.68
UBR3-202ENST00000392632 CGNQ9P2M7 1197 aaKnown RBP4.55□□□□□ -1.68
UBR3-202ENST00000392632 ABCC11Q96J66 1382 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 BACH1O14867 736 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms