RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 TRMT112Q9UI30 125 aaKnown RBP26.53■■□□□ 1.84
CDCA4-202ENST00000392590 KLRG2A4D1S0 409 aaPredicted RBP26.52■■□□□ 1.84
CDCA4-202ENST00000392590 SRGNP10124 158 aa26.52■■□□□ 1.84
CDCA4-202ENST00000392590 TTLL6Q8N841 843 aa26.52■■□□□ 1.84
CDCA4-202ENST00000392590 ABCC12Q96J65 1359 aa26.51■■□□□ 1.83
CDCA4-202ENST00000392590 FKBP5Q13451 457 aaPredicted RBP26.51■■□□□ 1.83
CDCA4-202ENST00000392590 ZNF428Q96B54 188 aa26.51■■□□□ 1.83
CDCA4-202ENST00000392590 RNF123Q5XPI4 1314 aa26.51■■□□□ 1.83
CDCA4-202ENST00000392590 MASTLQ96GX5 879 aa26.5■■□□□ 1.83
CDCA4-202ENST00000392590 SLC10A5Q5PT55 438 aa26.49■■□□□ 1.83
CDCA4-202ENST00000392590 STYK1Q6J9G0 422 aa26.49■■□□□ 1.83
CDCA4-202ENST00000392590 ADCY9O60503 1353 aa26.49■■□□□ 1.83
CDCA4-202ENST00000392590 SH3TC1Q8TE82 1336 aa26.48■■□□□ 1.83
CDCA4-202ENST00000392590 NPR1P16066 1061 aa26.48■■□□□ 1.83
CDCA4-202ENST00000392590 NEXNQ0ZGT2 675 aa26.48■■□□□ 1.83
CDCA4-202ENST00000392590 CNKSR1Q969H4 720 aa26.48■■□□□ 1.83
CDCA4-202ENST00000392590 SYNE4Q8N205 404 aa26.47■■□□□ 1.83
CDCA4-202ENST00000392590 CCDC191Q8NCU4 936 aa26.47■■□□□ 1.83
CDCA4-202ENST00000392590 NLRP3Q96P20 1036 aa26.47■■□□□ 1.83
CDCA4-202ENST00000392590 ANKRD31Q8N7Z5 1873 aa26.46■■□□□ 1.83
CDCA4-202ENST00000392590 CT47B1P0C2W7 299 aaPredicted RBP26.46■■□□□ 1.83
CDCA4-202ENST00000392590 FAM89AQ96GI7 184 aa26.46■■□□□ 1.83
CDCA4-202ENST00000392590 HCLS1P14317 486 aaPredicted RBP26.45■■□□□ 1.83
CDCA4-202ENST00000392590 CRY2Q49AN0 593 aa26.45■■□□□ 1.83
CDCA4-202ENST00000392590 ARHGAP27Q6ZUM4 889 aa26.45■■□□□ 1.83
CDCA4-202ENST00000392590 CWC25Q9NXE8 425 aaPredicted RBP26.45■■□□□ 1.83
CDCA4-202ENST00000392590 MRPL50Q8N5N7 158 aaKnown RBP26.44■■□□□ 1.82
CDCA4-202ENST00000392590 DNAAF4Q8WXU2 420 aa26.44■■□□□ 1.82
CDCA4-202ENST00000392590 SSH1Q8WYL5 1049 aa26.44■■□□□ 1.82
CDCA4-202ENST00000392590 ZBED9Q6R2W3 1325 aa26.44■■□□□ 1.82
CDCA4-202ENST00000392590 RIC1Q4ADV7 1423 aa26.44■■□□□ 1.82
CDCA4-202ENST00000392590 IGKV5-2P06315 115 aa26.44■■□□□ 1.82
CDCA4-202ENST00000392590 GOLGB1Q14789 3259 aaKnown RBP26.44■■□□□ 1.82
CDCA4-202ENST00000392590 RPGRQ92834 1020 aaKnown RBP26.44■■□□□ 1.82
CDCA4-202ENST00000392590 ANKRD36CQ5JPF3 1778 aa26.43■■□□□ 1.82
CDCA4-202ENST00000392590 ALDH1B1P30837 517 aa26.43■■□□□ 1.82
CDCA4-202ENST00000392590 ALDH1L2Q3SY69 923 aa26.43■■□□□ 1.82
CDCA4-202ENST00000392590 RTL5Q5HYW3 569 aaPredicted RBP26.43■■□□□ 1.82
CDCA4-202ENST00000392590 C3orf67Q6ZVT6 689 aa26.43■■□□□ 1.82
CDCA4-202ENST00000392590 ZBTB38Q8NAP3 1195 aaPredicted RBP26.43■■□□□ 1.82
CDCA4-202ENST00000392590 ARFGEF2Q9Y6D5 1785 aa26.42■■□□□ 1.82
CDCA4-202ENST00000392590 CWF19L2Q2TBE0 894 aaKnown RBP26.41■■□□□ 1.82
CDCA4-202ENST00000392590 PRPF40BQ6NWY9 871 aaKnown RBP26.41■■□□□ 1.82
CDCA4-202ENST00000392590 BCL2L13Q9BXK5 485 aa26.41■■□□□ 1.82
CDCA4-202ENST00000392590 NEURL1BA8MQ27 555 aa26.4■■□□□ 1.82
CDCA4-202ENST00000392590 F6X3S4 739 aa26.4■■□□□ 1.82
CDCA4-202ENST00000392590 PCCAP05165 728 aaPredicted RBP26.4■■□□□ 1.82
CDCA4-202ENST00000392590 YY1P25490 414 aa26.4■■□□□ 1.82
CDCA4-202ENST00000392590 HOXA10P31260 410 aaPredicted RBP26.4■■□□□ 1.82
CDCA4-202ENST00000392590 RBM17Q96I25 401 aaKnown RBP26.4■■□□□ 1.82
CDCA4-202ENST00000392590 ZNF219Q9P2Y4 722 aaPredicted RBP26.4■■□□□ 1.82
CDCA4-202ENST00000392590 BRCA1P38398 1863 aaKnown RBP26.4■■□□□ 1.82
CDCA4-202ENST00000392590 IRS4O14654 1257 aaPredicted RBP26.39■■□□□ 1.82
CDCA4-202ENST00000392590 C21orf2O43822 256 aa26.39■■□□□ 1.82
CDCA4-202ENST00000392590 LINS1Q8NG48 757 aa26.39■■□□□ 1.82
CDCA4-202ENST00000392590 SMC4Q9NTJ3 1288 aa26.39■■□□□ 1.82
CDCA4-202ENST00000392590 UTRNP46939 3433 aa26.39■■□□□ 1.82
CDCA4-202ENST00000392590 COL11A2P13942 1736 aaPredicted RBP26.38■■□□□ 1.81
CDCA4-202ENST00000392590 HSP90B1P14625 803 aaKnown RBP26.38■■□□□ 1.81
CDCA4-202ENST00000392590 JARID2Q92833 1246 aaPredicted RBP26.38■■□□□ 1.81
CDCA4-202ENST00000392590 DLEC1Q9Y238 1755 aa26.38■■□□□ 1.81
CDCA4-202ENST00000392590 TNRC6CQ9HCJ0 1690 aaKnown RBP26.37■■□□□ 1.81
CDCA4-202ENST00000392590 CRAMP1Q96RY5 1269 aa26.37■■□□□ 1.81
CDCA4-202ENST00000392590 PTPRCP08575 1304 aa26.36■■□□□ 1.81
CDCA4-202ENST00000392590 CACNA1FO60840 1977 aa26.36■■□□□ 1.81
CDCA4-202ENST00000392590 GCKRQ14397 625 aa26.35■■□□□ 1.81
CDCA4-202ENST00000392590 BEND3Q5T5X7 828 aa26.35■■□□□ 1.81
CDCA4-202ENST00000392590 RARSP54136 660 aaKnown RBP26.34■■□□□ 1.81
CDCA4-202ENST00000392590 SOGA3Q5TF21 947 aa26.34■■□□□ 1.81
CDCA4-202ENST00000392590 SLC4A10Q6U841 1118 aa26.34■■□□□ 1.81
CDCA4-202ENST00000392590 C7orf43Q8WVR3 580 aa26.34■■□□□ 1.81
CDCA4-202ENST00000392590 SF3B3Q15393 1217 aaKnown RBP26.34■■□□□ 1.81
CDCA4-202ENST00000392590 DDX46Q7L014 1031 aaKnown RBP26.34■■□□□ 1.81
CDCA4-202ENST00000392590 H7C1W4 665 aa26.33■■□□□ 1.81
CDCA4-202ENST00000392590 ARFGEF1Q9Y6D6 1849 aa26.32■■□□□ 1.8
CDCA4-202ENST00000392590 PDE8AO60658 829 aa26.32■■□□□ 1.8
CDCA4-202ENST00000392590 CDHR2Q9BYE9 1310 aa26.32■■□□□ 1.8
CDCA4-202ENST00000392590 BRPF1P55201 1214 aaPredicted RBP26.31■■□□□ 1.8
CDCA4-202ENST00000392590 UBE3BQ7Z3V4 1068 aa26.31■■□□□ 1.8
CDCA4-202ENST00000392590 ABCC4O15439 1325 aa26.31■■□□□ 1.8
CDCA4-202ENST00000392590 SRCIN1Q9C0H9 1055 aa26.3■■□□□ 1.8
CDCA4-202ENST00000392590 NOB1Q9ULX3 412 aaKnown RBP26.3■■□□□ 1.8
CDCA4-202ENST00000392590 RASSF7Q02833 373 aa26.29■■□□□ 1.8
CDCA4-202ENST00000392590 CCDC93Q567U6 631 aa26.29■■□□□ 1.8
CDCA4-202ENST00000392590 SLX4Q8IY92 1834 aa26.29■■□□□ 1.8
CDCA4-202ENST00000392590 NFKBIEO00221 500 aa26.29■■□□□ 1.8
CDCA4-202ENST00000392590 PPEF1O14829 653 aaPredicted RBP26.29■■□□□ 1.8
CDCA4-202ENST00000392590 ALDH1L1O75891 902 aa26.29■■□□□ 1.8
CDCA4-202ENST00000392590 BBOX1O75936 387 aa26.29■■□□□ 1.8
CDCA4-202ENST00000392590 OLFM4Q6UX06 510 aa26.29■■□□□ 1.8
CDCA4-202ENST00000392590 GRAPQ13588 217 aa26.28■■□□□ 1.8
CDCA4-202ENST00000392590 C9orf131Q5VYM1 1079 aa26.28■■□□□ 1.8
CDCA4-202ENST00000392590 GRAPLQ8TC17 118 aaPredicted RBP26.28■■□□□ 1.8
CDCA4-202ENST00000392590 CC2D2BQ6DHV5 1058 aa26.27■■□□□ 1.8
CDCA4-202ENST00000392590 RTKN2Q8IZC4 609 aa26.27■■□□□ 1.8
CDCA4-202ENST00000392590 CASP7P55210 303 aa26.26■■□□□ 1.79
CDCA4-202ENST00000392590 CCDC152Q4G0S7 254 aa26.26■■□□□ 1.79
CDCA4-202ENST00000392590 TMX4Q9H1E5 349 aaPredicted RBP26.26■■□□□ 1.79
CDCA4-202ENST00000392590 TAOK3Q9H2K8 898 aa26.26■■□□□ 1.79
CDCA4-202ENST00000392590 LMNB1P20700 586 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms