RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 ARFGEF2Q9Y6D5 1785 aa15.24■□□□□ 0.03
RFC4-202ENST00000392481 C21orf2O43822 256 aa15.24■□□□□ 0.03
RFC4-202ENST00000392481 C9orf131Q5VYM1 1079 aa15.24■□□□□ 0.03
RFC4-202ENST00000392481 ISCA1Q9BUE6 129 aa15.24■□□□□ 0.03
RFC4-202ENST00000392481 STK31Q9BXU1 1019 aa15.24■□□□□ 0.03
RFC4-202ENST00000392481 MYH16Q9H6N6 1097 aa15.24■□□□□ 0.03
RFC4-202ENST00000392481 SBF1O95248 1867 aa15.23■□□□□ 0.03
RFC4-202ENST00000392481 TNRC6CQ9HCJ0 1690 aaKnown RBP15.23■□□□□ 0.03
RFC4-202ENST00000392481 ALDH1B1P30837 517 aa15.23■□□□□ 0.03
RFC4-202ENST00000392481 TRIM28Q13263 835 aaKnown RBP15.23■□□□□ 0.03
RFC4-202ENST00000392481 SOGA3Q5TF21 947 aa15.23■□□□□ 0.03
RFC4-202ENST00000392481 RIC3Q7Z5B4 369 aa15.23■□□□□ 0.03
RFC4-202ENST00000392481 SPINK5Q9NQ38 1064 aaPredicted RBP15.23■□□□□ 0.03
RFC4-202ENST00000392481 TRMT112Q9UI30 125 aaKnown RBP15.23■□□□□ 0.03
RFC4-202ENST00000392481 NFKBIEO00221 500 aa15.22■□□□□ 0.03
RFC4-202ENST00000392481 DDX58O95786 925 aaKnown RBP15.22■□□□□ 0.03
RFC4-202ENST00000392481 HOXA10P31260 410 aaPredicted RBP15.22■□□□□ 0.03
RFC4-202ENST00000392481 EXOSC9Q06265 439 aaKnown RBP15.22■□□□□ 0.03
RFC4-202ENST00000392481 DIEXFQ68CQ4 756 aaKnown RBP15.22■□□□□ 0.03
RFC4-202ENST00000392481 C7orf43Q8WVR3 580 aa15.22■□□□□ 0.03
RFC4-202ENST00000392481 NLRP3Q96P20 1036 aa15.22■□□□□ 0.03
RFC4-202ENST00000392481 RNF181Q9P0P0 153 aa15.22■□□□□ 0.03
RFC4-202ENST00000392481 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
RFC4-202ENST00000392481 CACNA1SQ13698 1873 aa15.22■□□□□ 0.03
RFC4-202ENST00000392481 SH3TC1Q8TE82 1336 aa15.21■□□□□ 0.03
RFC4-202ENST00000392481 ATP5J2-PTCD1G3V325 749 aa15.21■□□□□ 0.03
RFC4-202ENST00000392481 LMNB1P20700 586 aa15.21■□□□□ 0.03
RFC4-202ENST00000392481 RASSF7Q02833 373 aa15.21■□□□□ 0.03
RFC4-202ENST00000392481 RPGRQ92834 1020 aaKnown RBP15.21■□□□□ 0.03
RFC4-202ENST00000392481 FER1L6Q2WGJ9 1857 aa15.2■□□□□ 0.02
RFC4-202ENST00000392481 CACNA1FO60840 1977 aa15.2■□□□□ 0.02
RFC4-202ENST00000392481 TCERG1O14776 1098 aaKnown RBP15.2■□□□□ 0.02
RFC4-202ENST00000392481 VAMP4O75379 141 aa15.2■□□□□ 0.02
RFC4-202ENST00000392481 SLC4A2P04920 1241 aa15.2■□□□□ 0.02
RFC4-202ENST00000392481 CRAMP1Q96RY5 1269 aa15.2■□□□□ 0.02
RFC4-202ENST00000392481 GPBP1L1Q9HC44 474 aaPredicted RBP15.2■□□□□ 0.02
RFC4-202ENST00000392481 LTBP3Q9NS15 1303 aa15.2■□□□□ 0.02
RFC4-202ENST00000392481 C3orf67Q6ZVT6 689 aa15.19■□□□□ 0.02
RFC4-202ENST00000392481 SYNE4Q8N205 404 aa15.19■□□□□ 0.02
RFC4-202ENST00000392481 RBM17Q96I25 401 aaKnown RBP15.19■□□□□ 0.02
RFC4-202ENST00000392481 ZC3H4Q9UPT8 1303 aaKnown RBP15.19■□□□□ 0.02
RFC4-202ENST00000392481 HCLS1P14317 486 aaPredicted RBP15.18■□□□□ 0.02
RFC4-202ENST00000392481 PRELPP51888 382 aa15.18■□□□□ 0.02
RFC4-202ENST00000392481 CCDC93Q567U6 631 aa15.18■□□□□ 0.02
RFC4-202ENST00000392481 KSR2Q6VAB6 950 aa15.18■□□□□ 0.02
RFC4-202ENST00000392481 ZNF526Q8TF50 670 aaPredicted RBP15.18■□□□□ 0.02
RFC4-202ENST00000392481 METTL22Q9BUU2 404 aaPredicted RBP15.18■□□□□ 0.02
RFC4-202ENST00000392481 TAOK3Q9H2K8 898 aa15.18■□□□□ 0.02
RFC4-202ENST00000392481 PI4KAP2A4QPH2 592 aa15.17■□□□□ 0.02
RFC4-202ENST00000392481 G2E3Q7L622 706 aa15.17■□□□□ 0.02
RFC4-202ENST00000392481 RTKN2Q8IZC4 609 aa15.17■□□□□ 0.02
RFC4-202ENST00000392481 PI4KAP1Q8N8J0 262 aa15.17■□□□□ 0.02
RFC4-202ENST00000392481 CCDC191Q8NCU4 936 aa15.17■□□□□ 0.02
RFC4-202ENST00000392481 FAM89AQ96GI7 184 aa15.17■□□□□ 0.02
RFC4-202ENST00000392481 MYD88Q99836 296 aa15.17■□□□□ 0.02
RFC4-202ENST00000392481 MAP3K2Q9Y2U5 619 aa15.17■□□□□ 0.02
RFC4-202ENST00000392481 CCDC88AQ3V6T2 1871 aa15.17■□□□□ 0.02
RFC4-202ENST00000392481 E9PSI1 815 aa15.17■□□□□ 0.02
RFC4-202ENST00000392481 CC2D2BQ6DHV5 1058 aa15.17■□□□□ 0.02
RFC4-202ENST00000392481 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
RFC4-202ENST00000392481 FLIIQ13045 1269 aa15.16■□□□□ 0.02
RFC4-202ENST00000392481 MIER1Q8N108 512 aa15.16■□□□□ 0.02
RFC4-202ENST00000392481 ZBTB38Q8NAP3 1195 aaPredicted RBP15.16■□□□□ 0.02
RFC4-202ENST00000392481 CWC25Q9NXE8 425 aaPredicted RBP15.16■□□□□ 0.02
RFC4-202ENST00000392481 LAMB2P55268 1798 aa15.15■□□□□ 0.02
RFC4-202ENST00000392481 HSP90B1P14625 803 aaKnown RBP15.15■□□□□ 0.02
RFC4-202ENST00000392481 FKBP4Q02790 459 aaKnown RBP eCLIP15.15■□□□□ 0.02
RFC4-202ENST00000392481 NEXNQ0ZGT2 675 aa15.15■□□□□ 0.02
RFC4-202ENST00000392481 GRIPAP1Q4V328 841 aa15.15■□□□□ 0.02
RFC4-202ENST00000392481 OLFM4Q6UX06 510 aa15.15■□□□□ 0.02
RFC4-202ENST00000392481 DDX60Q8IY21 1712 aaKnown RBP15.14■□□□□ 0.01
RFC4-202ENST00000392481 DICER1Q9UPY3 1922 aaKnown RBP15.14■□□□□ 0.01
RFC4-202ENST00000392481 IRS4O14654 1257 aaPredicted RBP15.14■□□□□ 0.01
RFC4-202ENST00000392481 PPEF1O14829 653 aaPredicted RBP15.14■□□□□ 0.01
RFC4-202ENST00000392481 PCCAP05165 728 aaPredicted RBP15.14■□□□□ 0.01
RFC4-202ENST00000392481 SLFN5Q08AF3 891 aa15.14■□□□□ 0.01
RFC4-202ENST00000392481 FKBP5Q13451 457 aaPredicted RBP15.14■□□□□ 0.01
RFC4-202ENST00000392481 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
RFC4-202ENST00000392481 DDX46Q7L014 1031 aaKnown RBP15.14■□□□□ 0.01
RFC4-202ENST00000392481 ABCC4O15439 1325 aa15.14■□□□□ 0.01
RFC4-202ENST00000392481 KDM2BQ8NHM5 1336 aa15.14■□□□□ 0.01
RFC4-202ENST00000392481 SNED1Q8TER0 1413 aa15.13■□□□□ 0.01
RFC4-202ENST00000392481 BBOX1O75936 387 aa15.13■□□□□ 0.01
RFC4-202ENST00000392481 IGKV5-2P06315 115 aa15.13■□□□□ 0.01
RFC4-202ENST00000392481 RTL5Q5HYW3 569 aaPredicted RBP15.13■□□□□ 0.01
RFC4-202ENST00000392481 PSMD1Q99460 953 aa15.12■□□□□ 0.01
RFC4-202ENST00000392481 TMX4Q9H1E5 349 aaPredicted RBP15.12■□□□□ 0.01
RFC4-202ENST00000392481 ATP6V0A2Q9Y487 856 aa15.12■□□□□ 0.01
RFC4-202ENST00000392481 TIAM2Q8IVF5 1701 aa15.12■□□□□ 0.01
RFC4-202ENST00000392481 GLTPD2A6NH11 291 aa15.11■□□□□ 0.01
RFC4-202ENST00000392481 NEURL1BA8MQ27 555 aa15.11■□□□□ 0.01
RFC4-202ENST00000392481 KIF3CO14782 793 aa15.11■□□□□ 0.01
RFC4-202ENST00000392481 C1QTNF8P60827 252 aa15.11■□□□□ 0.01
RFC4-202ENST00000392481 GRAPQ13588 217 aa15.11■□□□□ 0.01
RFC4-202ENST00000392481 GRAPLQ8TC17 118 aaPredicted RBP15.11■□□□□ 0.01
RFC4-202ENST00000392481 DNAAF4Q8WXU2 420 aa15.11■□□□□ 0.01
RFC4-202ENST00000392481 ZNF277Q9NRM2 450 aaPredicted RBP15.11■□□□□ 0.01
RFC4-202ENST00000392481 CWF19L2Q2TBE0 894 aaKnown RBP15.1■□□□□ 0.01
RFC4-202ENST00000392481 TMC4Q7Z404 712 aa15.1■□□□□ 0.01
RFC4-202ENST00000392481 TRMT2AQ8IZ69 625 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms