RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 PARP10Q53GL7 1025 aa18.03■□□□□ 0.48
CCDC57-204ENST00000392345 C7orf43Q8WVR3 580 aa18.03■□□□□ 0.48
CCDC57-204ENST00000392345 NMRK2Q9NPI5 230 aa18.03■□□□□ 0.48
CCDC57-204ENST00000392345 SBF1O95248 1867 aa18.02■□□□□ 0.48
CCDC57-204ENST00000392345 PLBD2Q8NHP8 589 aa18.02■□□□□ 0.48
CCDC57-204ENST00000392345 UTP14AQ9BVJ6 771 aaKnown RBP18.02■□□□□ 0.48
CCDC57-204ENST00000392345 PHAXQ9H814 394 aaKnown RBP18.02■□□□□ 0.48
CCDC57-204ENST00000392345 TIAM2Q8IVF5 1701 aa18.01■□□□□ 0.47
CCDC57-204ENST00000392345 HSP90AB3PQ58FF7 597 aa18.01■□□□□ 0.47
CCDC57-204ENST00000392345 ANKRD13DQ6ZTN6 518 aa18.01■□□□□ 0.47
CCDC57-204ENST00000392345 PPP1R42Q7Z4L9 355 aa18.01■□□□□ 0.47
CCDC57-204ENST00000392345 HYPKQ9NX55 129 aa18.01■□□□□ 0.47
CCDC57-204ENST00000392345 FER1L6Q2WGJ9 1857 aa18.01■□□□□ 0.47
CCDC57-204ENST00000392345 CEP350Q5VT06 3117 aa18.01■□□□□ 0.47
CCDC57-204ENST00000392345 FANCIQ9NVI1 1328 aa18■□□□□ 0.47
CCDC57-204ENST00000392345 ATP5J2-PTCD1G3V325 749 aa18■□□□□ 0.47
CCDC57-204ENST00000392345 TCERG1O14776 1098 aaKnown RBP18■□□□□ 0.47
CCDC57-204ENST00000392345 TAOK3Q9H2K8 898 aa18■□□□□ 0.47
CCDC57-204ENST00000392345 IL16Q14005 1332 aa17.99■□□□□ 0.47
CCDC57-204ENST00000392345 SNED1Q8TER0 1413 aa17.99■□□□□ 0.47
CCDC57-204ENST00000392345 HCLS1P14317 486 aaPredicted RBP17.99■□□□□ 0.47
CCDC57-204ENST00000392345 NCBP3Q53F19 620 aaKnown RBP17.99■□□□□ 0.47
CCDC57-204ENST00000392345 CCDC93Q567U6 631 aa17.99■□□□□ 0.47
CCDC57-204ENST00000392345 ISCA1Q9BUE6 129 aa17.99■□□□□ 0.47
CCDC57-204ENST00000392345 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
CCDC57-204ENST00000392345 LTBP3Q9NS15 1303 aa17.98■□□□□ 0.47
CCDC57-204ENST00000392345 RPGRQ92834 1020 aaKnown RBP17.98■□□□□ 0.47
CCDC57-204ENST00000392345 HOXA10P31260 410 aaPredicted RBP17.97■□□□□ 0.47
CCDC57-204ENST00000392345 SLC10A5Q5PT55 438 aa17.97■□□□□ 0.47
CCDC57-204ENST00000392345 SOGA3Q5TF21 947 aa17.97■□□□□ 0.47
CCDC57-204ENST00000392345 TRMT112Q9UI30 125 aaKnown RBP17.97■□□□□ 0.47
CCDC57-204ENST00000392345 ALDH1B1P30837 517 aa17.96■□□□□ 0.47
CCDC57-204ENST00000392345 GOLGA2Q08379 1002 aa17.96■□□□□ 0.47
CCDC57-204ENST00000392345 TWISTNBQ3B726 338 aaPredicted RBP17.96■□□□□ 0.47
CCDC57-204ENST00000392345 CCDC30Q5VVM6 783 aa17.96■□□□□ 0.47
CCDC57-204ENST00000392345 ZNF277Q9NRM2 450 aaPredicted RBP17.96■□□□□ 0.47
CCDC57-204ENST00000392345 RNF123Q5XPI4 1314 aa17.96■□□□□ 0.46
CCDC57-204ENST00000392345 SH3TC1Q8TE82 1336 aa17.96■□□□□ 0.46
CCDC57-204ENST00000392345 ZC3H4Q9UPT8 1303 aaKnown RBP17.96■□□□□ 0.46
CCDC57-204ENST00000392345 FKBP4Q02790 459 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCDC57-204ENST00000392345 RIC3Q7Z5B4 369 aa17.95■□□□□ 0.46
CCDC57-204ENST00000392345 WDR63Q8IWG1 891 aa17.95■□□□□ 0.46
CCDC57-204ENST00000392345 NLRP3Q96P20 1036 aa17.95■□□□□ 0.46
CCDC57-204ENST00000392345 ABCC4O15439 1325 aa17.95■□□□□ 0.46
CCDC57-204ENST00000392345 LAMB2P55268 1798 aa17.94■□□□□ 0.46
CCDC57-204ENST00000392345 RTL5Q5HYW3 569 aaPredicted RBP17.94■□□□□ 0.46
CCDC57-204ENST00000392345 G2E3Q7L622 706 aa17.94■□□□□ 0.46
CCDC57-204ENST00000392345 FAM89AQ96GI7 184 aa17.94■□□□□ 0.46
CCDC57-204ENST00000392345 RBM17Q96I25 401 aaKnown RBP17.94■□□□□ 0.46
CCDC57-204ENST00000392345 CRAMP1Q96RY5 1269 aa17.94■□□□□ 0.46
CCDC57-204ENST00000392345 MYD88Q99836 296 aa17.94■□□□□ 0.46
CCDC57-204ENST00000392345 KDM2BQ8NHM5 1336 aa17.94■□□□□ 0.46
CCDC57-204ENST00000392345 DDX60Q8IY21 1712 aaKnown RBP17.93■□□□□ 0.46
CCDC57-204ENST00000392345 PPEF1O14829 653 aaPredicted RBP17.93■□□□□ 0.46
CCDC57-204ENST00000392345 EXOSC9Q06265 439 aaKnown RBP17.93■□□□□ 0.46
CCDC57-204ENST00000392345 RRAGCQ9HB90 399 aa17.93■□□□□ 0.46
CCDC57-204ENST00000392345 COL4A1P02462 1669 aa17.93■□□□□ 0.46
CCDC57-204ENST00000392345 CCDC88AQ3V6T2 1871 aa17.92■□□□□ 0.46
CCDC57-204ENST00000392345 GLTPD2A6NH11 291 aa17.92■□□□□ 0.46
CCDC57-204ENST00000392345 COL4A5P29400 1685 aa17.92■□□□□ 0.46
CCDC57-204ENST00000392345 ZNF521Q96K83 1311 aa17.92■□□□□ 0.46
CCDC57-204ENST00000392345 TRIM28Q13263 835 aaKnown RBP17.91■□□□□ 0.46
CCDC57-204ENST00000392345 RTKN2Q8IZC4 609 aa17.91■□□□□ 0.46
CCDC57-204ENST00000392345 JARID2Q92833 1246 aaPredicted RBP17.91■□□□□ 0.46
CCDC57-204ENST00000392345 MAP3K2Q9Y2U5 619 aa17.91■□□□□ 0.46
CCDC57-204ENST00000392345 METTL22Q9BUU2 404 aaPredicted RBP17.9■□□□□ 0.46
CCDC57-204ENST00000392345 STK31Q9BXU1 1019 aa17.9■□□□□ 0.46
CCDC57-204ENST00000392345 PI4KAP2A4QPH2 592 aa17.89■□□□□ 0.45
CCDC57-204ENST00000392345 IRS4O14654 1257 aaPredicted RBP17.89■□□□□ 0.45
CCDC57-204ENST00000392345 VAMP4O75379 141 aa17.89■□□□□ 0.45
CCDC57-204ENST00000392345 SLC4A2P04920 1241 aa17.89■□□□□ 0.45
CCDC57-204ENST00000392345 PI4KAP1Q8N8J0 262 aa17.89■□□□□ 0.45
CCDC57-204ENST00000392345 DICER1Q9UPY3 1922 aaKnown RBP17.89■□□□□ 0.45
CCDC57-204ENST00000392345 ZNF541Q9H0D2 1346 aa17.89■□□□□ 0.45
CCDC57-204ENST00000392345 POTECB2RU33 542 aa17.88■□□□□ 0.45
CCDC57-204ENST00000392345 TOMM70O94826 608 aa17.88■□□□□ 0.45
CCDC57-204ENST00000392345 DDNO94850 711 aaPredicted RBP17.88■□□□□ 0.45
CCDC57-204ENST00000392345 DDX58O95786 925 aaKnown RBP17.88■□□□□ 0.45
CCDC57-204ENST00000392345 IGKV5-2P06315 115 aa17.88■□□□□ 0.45
CCDC57-204ENST00000392345 IARSP41252 1262 aaKnown RBP17.88■□□□□ 0.45
CCDC57-204ENST00000392345 PSMD1Q99460 953 aa17.88■□□□□ 0.45
CCDC57-204ENST00000392345 ATP6V0A2Q9Y487 856 aa17.88■□□□□ 0.45
CCDC57-204ENST00000392345 GRAPQ13588 217 aa17.87■□□□□ 0.45
CCDC57-204ENST00000392345 CC2D2BQ6DHV5 1058 aa17.87■□□□□ 0.45
CCDC57-204ENST00000392345 KSR2Q6VAB6 950 aa17.87■□□□□ 0.45
CCDC57-204ENST00000392345 DDX46Q7L014 1031 aaKnown RBP17.87■□□□□ 0.45
CCDC57-204ENST00000392345 ZBTB38Q8NAP3 1195 aaPredicted RBP17.87■□□□□ 0.45
CCDC57-204ENST00000392345 GRAPLQ8TC17 118 aaPredicted RBP17.87■□□□□ 0.45
CCDC57-204ENST00000392345 CHMP4AQ9BY43 222 aa17.87■□□□□ 0.45
CCDC57-204ENST00000392345 CWC25Q9NXE8 425 aaPredicted RBP17.87■□□□□ 0.45
CCDC57-204ENST00000392345 WDR90Q96KV7 1748 aa17.86■□□□□ 0.45
CCDC57-204ENST00000392345 FLIIQ13045 1269 aa17.86■□□□□ 0.45
CCDC57-204ENST00000392345 SF3B3Q15393 1217 aaKnown RBP17.86■□□□□ 0.45
CCDC57-204ENST00000392345 CCDC191Q8NCU4 936 aa17.86■□□□□ 0.45
CCDC57-204ENST00000392345 CELF1Q92879 486 aaKnown RBP17.86■□□□□ 0.45
CCDC57-204ENST00000392345 TAF1P21675 1872 aa17.85■□□□□ 0.45
CCDC57-204ENST00000392345 CWF19L2Q2TBE0 894 aaKnown RBP17.85■□□□□ 0.45
CCDC57-204ENST00000392345 C16orf71Q8IYS4 520 aaPredicted RBP17.85■□□□□ 0.45
CCDC57-204ENST00000392345 RBM46Q8TBY0 533 aaKnown RBP17.85■□□□□ 0.45
CCDC57-204ENST00000392345 MYH16Q9H6N6 1097 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms