RNA–Protein interactions for RNA: ENST00000391307.1

RNU1-139P-201, Transcript of RNA, U1 small nuclear 139, pseudogene, humanhuman

BASIC

Gene RNU1-139P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-139P-201ENST00000391307 SWI5Q1ZZU3 235 aa4.69□□□□□ -1.66
RNU1-139P-201ENST00000391307 SAP130Q9H0E3 1048 aa4.69□□□□□ -1.66
RNU1-139P-201ENST00000391307 KCNH4Q9UQ05 1017 aa4.69□□□□□ -1.66
RNU1-139P-201ENST00000391307 TGFBR3LH3BV60 316 aa4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 HOXB4P17483 251 aaPredicted RBP4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 IDH3AP50213 366 aa4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 TBC1D8BQ0IIM8 1120 aa4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 KCNMA1Q12791 1236 aa4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 LAMC2Q13753 1193 aa4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 FAM26DQ5JW98 314 aa4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 COX20Q5RI15 118 aa4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 CHSY3Q70JA7 882 aa4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 PODNQ7Z5L7 613 aa4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 BHMTQ93088 406 aa4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 SCARF2Q96GP6 870 aaPredicted RBP4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 CXXC1Q9P0U4 656 aaPredicted RBP4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 DMGDHQ9UI17 866 aaKnown RBP4.68□□□□□ -1.66
RNU1-139P-201ENST00000391307 RNF225M0QZC1 329 aaPredicted RBP4.67□□□□□ -1.66
RNU1-139P-201ENST00000391307 GDF11O95390 407 aa4.67□□□□□ -1.66
RNU1-139P-201ENST00000391307 KRT25Q7Z3Z0 450 aa4.67□□□□□ -1.66
RNU1-139P-201ENST00000391307 KCTD17Q8N5Z5 321 aa4.67□□□□□ -1.66
RNU1-139P-201ENST00000391307 BTBD6Q96KE9 485 aa4.67□□□□□ -1.66
RNU1-139P-201ENST00000391307 IGFLR1Q9H665 355 aa4.67□□□□□ -1.66
RNU1-139P-201ENST00000391307 LRRC4BQ9NT99 713 aa4.67□□□□□ -1.66
RNU1-139P-201ENST00000391307 MICAL2O94851 1124 aa4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 ATP2B4P23634 1241 aa4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 DGKGP49619 791 aa4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 KCNQ4P56696 695 aa4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 HIF1AQ16665 826 aa4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 C11orf91Q3C1V1 193 aa4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 C8orf86Q6ZUL3 223 aa4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 ETFBKMTQ8IXQ9 262 aa4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 TMEM151AQ8N4L1 468 aa4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 CLP1Q92989 425 aaKnown RBP4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 IFT43Q96FT9 208 aa4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 MYO19Q96H55 970 aa4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 SUV39H2Q9H5I1 410 aa4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 SEPT3Q9UH03 358 aa4.66□□□□□ -1.66
RNU1-139P-201ENST00000391307 NFKB1P19838 968 aa4.65□□□□□ -1.67
RNU1-139P-201ENST00000391307 INPP5BP32019 993 aa4.65□□□□□ -1.67
RNU1-139P-201ENST00000391307 ADH7P40394 386 aa4.65□□□□□ -1.67
RNU1-139P-201ENST00000391307 IER5Q5VY09 327 aa4.65□□□□□ -1.67
RNU1-139P-201ENST00000391307 C16orf46Q6P387 395 aa4.65□□□□□ -1.67
RNU1-139P-201ENST00000391307 TREML1Q86YW5 311 aa4.65□□□□□ -1.67
RNU1-139P-201ENST00000391307 RGL4Q8IZJ4 473 aa4.65□□□□□ -1.67
RNU1-139P-201ENST00000391307 BEND7Q8N7W2 519 aaPredicted RBP4.65□□□□□ -1.67
RNU1-139P-201ENST00000391307 GSX2Q9BZM3 304 aa4.65□□□□□ -1.67
RNU1-139P-201ENST00000391307 UBE2OQ9C0C9 1292 aaKnown RBP4.65□□□□□ -1.67
RNU1-139P-201ENST00000391307 AVENQ9NQS1 362 aaPredicted RBP4.65□□□□□ -1.67
RNU1-139P-201ENST00000391307 MKL2Q9ULH7 1088 aa4.65□□□□□ -1.67
RNU1-139P-201ENST00000391307 ELOA3CA0A087WX78 387 aaPredicted RBP4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 TMEM88BA6NKF7 163 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 ELOA3DA6NLF2 546 aaPredicted RBP4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 PHF20L1A8MW92 1017 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 TNFRSF10BO14763 440 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 OPLAHO14841 1288 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 SIN3BO75182 1162 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 ARSDP51689 593 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 CCINQ13939 588 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 ELOA3BQ3SY89 546 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 LINC00114Q6XXX2 140 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 ELOA3Q8NG57 546 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 PNMA5Q96PV4 448 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 MDFIQ99750 246 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 ZFATQ9P243 1243 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 STARD13Q9Y3M8 1113 aa4.64□□□□□ -1.67
RNU1-139P-201ENST00000391307 M0R082 166 aa4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 SASH3O75995 380 aa4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 ALBP02768 609 aa4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 TARSP26639 723 aaKnown RBP4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 COL8A1P27658 744 aa4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 MLLT1Q03111 559 aaPredicted RBP4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 NEUROD1Q13562 356 aa4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 MTMR3Q13615 1198 aa4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 KANK3Q6NY19 840 aa4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 CMTR1Q8N1G2 835 aaKnown RBP4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 ZNF417Q8TAU3 575 aa4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 TNFRSF25Q93038 417 aa4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 DCAF5Q96JK2 942 aa4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 ZNF587Q96SQ5 575 aaPredicted RBP4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 NAGPAQ9UK23 515 aa4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 RTCBQ9Y3I0 505 aaKnown RBP4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.63□□□□□ -1.67
RNU1-139P-201ENST00000391307 ADARB2-AS1A8MUL3 147 aa4.62□□□□□ -1.67
RNU1-139P-201ENST00000391307 ZBTB39O15060 712 aa4.62□□□□□ -1.67
RNU1-139P-201ENST00000391307 EPB42P16452 691 aa4.62□□□□□ -1.67
RNU1-139P-201ENST00000391307 ALAS2P22557 587 aa4.62□□□□□ -1.67
RNU1-139P-201ENST00000391307 TRIP4Q15650 581 aaPredicted RBP4.62□□□□□ -1.67
RNU1-139P-201ENST00000391307 GPAT2Q6NUI2 795 aa4.62□□□□□ -1.67
RNU1-139P-201ENST00000391307 ATCAYQ86WG3 371 aa4.62□□□□□ -1.67
RNU1-139P-201ENST00000391307 NUDT8Q8WV74 236 aa4.62□□□□□ -1.67
RNU1-139P-201ENST00000391307 TRIM11Q96F44 468 aa4.62□□□□□ -1.67
RNU1-139P-201ENST00000391307 DNAJB12Q9NXW2 375 aaKnown RBP4.62□□□□□ -1.67
RNU1-139P-201ENST00000391307 SLC6A14Q9UN76 642 aa4.62□□□□□ -1.67
RNU1-139P-201ENST00000391307 KRBA1A5PL33 1030 aa4.61□□□□□ -1.67
RNU1-139P-201ENST00000391307 FAM229AH3BQW9 127 aa4.61□□□□□ -1.67
RNU1-139P-201ENST00000391307 GNB5O14775 395 aa4.61□□□□□ -1.67
RNU1-139P-201ENST00000391307 PTCD1O75127 700 aaKnown RBP4.61□□□□□ -1.67
RNU1-139P-201ENST00000391307 XYLBO75191 536 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms