RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 BIRC2Q13490 618 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 DGKZQ13574 1117 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 COL9A2Q14055 689 aaPredicted RBP3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 RAB33AQ14088 237 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 C11orf91Q3C1V1 193 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 VASH1Q7L8A9 365 aaPredicted RBP3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 CYP2U1Q7Z449 544 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 RELL1Q8IUW5 271 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 TRMT44Q8IYL2 757 aaKnown RBP3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 ZNF511Q8NB15 262 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 ANKK1Q8NFD2 765 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 HNRNPLLQ8WVV9 542 aaKnown RBP3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 PMM1Q92871 262 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 ANAPC16Q96DE5 110 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 IFT43Q96FT9 208 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 HOMER2Q9NSB8 354 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 KBTBD4Q9NVX7 518 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 SCHIP1Q9P0W5 487 aaPredicted RBP3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 LRFN2Q9ULH4 789 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 TTF2Q9UNY4 1162 aaKnown RBP3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 VPS9D1Q9Y2B5 631 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 EFR3BQ9Y2G0 817 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 SERTM1A2A2V5 107 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 GADD45BO75293 160 aaPredicted RBP3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 CNGA1P29973 690 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 GBP2P32456 591 aaPredicted RBP3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 ETFBP38117 255 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 APLP1P51693 650 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 ERVK-9P63128 1117 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 AMPD3Q01432 767 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 EVX2Q03828 476 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 DHX9Q08211 1270 aaKnown RBP3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 RALBP1Q15311 655 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 RTN1Q16799 776 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 TNNI3KQ59H18 835 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 PTCRAQ6ISU1 281 aaPredicted RBP3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 ERMP1Q7Z2K6 904 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 RPUSD2Q8IZ73 545 aaKnown RBP3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 FAM160A2Q8N612 972 aaPredicted RBP3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 TRPM4Q8TD43 1214 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 GPR152Q8TDT2 470 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 NUDT16Q96DE0 195 aaKnown RBP3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 STAC3Q96MF2 364 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 SLC4A9Q96Q91 983 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 NOC4LQ9BVI4 516 aaKnown RBP3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 C1QTNF2Q9BXJ5 285 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 UBA5Q9GZZ9 404 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 ETNK1Q9HBU6 452 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 COPRSQ9NQ92 184 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 PPP4R2Q9NY27 417 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 PRR12Q9ULL5 1215 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 HPS5Q9UPZ3 1129 aa3.34□□□□□ -1.87
RNU6-220P-201ENST00000390919 ESYT3A0FGR9 886 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 STAU1O95793 577 aaKnown RBP3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 GNRH1P01148 92 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 RLBP1P12271 317 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 GSTT1P30711 240 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 EIF4A3P38919 411 aaKnown RBP3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 PBX2P40425 430 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 SMTNP53814 917 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 GYS2P54840 703 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 FOXK2Q01167 660 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 RASA3Q14644 834 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 TLR1Q15399 786 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 HSP90AB4PQ58FF6 505 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 INTS6LQ5JSJ4 861 aaKnown RBP3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 DMRTA1Q5VZB9 504 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 C16orf86Q6ZW13 317 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 APBB1IPQ7Z5R6 666 aaPredicted RBP3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 TREML1Q86YW5 311 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 WDR75Q8IWA0 830 aaKnown RBP3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 ETFBKMTQ8IXQ9 262 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 ALDH16A1Q8IZ83 802 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 EPS8L3Q8TE67 593 aaKnown RBP3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 SNX29Q8TEQ0 813 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 CCDC74AQ96AQ1 378 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 SGSM3Q96HU1 749 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 FEZ1Q99689 392 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 OSBPL7Q9BZF2 842 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 OSBPL3Q9H4L5 887 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 GINM1Q9NU53 330 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 PRKAG3Q9UGI9 489 aa3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 TSR3Q9UJK0 312 aaKnown RBP3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 FNDC3AQ9Y2H6 1198 aaKnown RBP3.33□□□□□ -1.88
RNU6-220P-201ENST00000390919 FAM221BA6H8Z2 402 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 MINDY4BA8MYZ0 360 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 CDK2AP1O14519 115 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 KLF4O43474 513 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 SH3BP5O60239 455 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 PHACTR2O75167 634 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 ADH1BP00325 375 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 HCLS1P14317 486 aaPredicted RBP3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 GTF2E1P29083 439 aaPredicted RBP3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 MASP1P48740 699 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 RHBDL3P58872 404 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 COPS2P61201 443 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 HDAC1Q13547 482 aaPredicted RBP3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 SAFB2Q14151 953 aaKnown RBP eCLIP3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 MTFR1Q15390 333 aa3.32□□□□□ -1.88
RNU6-220P-201ENST00000390919 CCDC85BQ15834 202 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms