RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 ALDH1B1P30837 517 aa19.26■□□□□ 0.67
SNRPN-202ENST00000390687 SLC10A5Q5PT55 438 aa19.26■□□□□ 0.67
SNRPN-202ENST00000390687 PHAXQ9H814 394 aaKnown RBP19.26■□□□□ 0.67
SNRPN-202ENST00000390687 WDR63Q8IWG1 891 aa19.25■□□□□ 0.67
SNRPN-202ENST00000390687 HOXA10P31260 410 aaPredicted RBP19.25■□□□□ 0.67
SNRPN-202ENST00000390687 CCDC30Q5VVM6 783 aa19.25■□□□□ 0.67
SNRPN-202ENST00000390687 C3orf67Q6ZVT6 689 aa19.25■□□□□ 0.67
SNRPN-202ENST00000390687 SYNE4Q8N205 404 aa19.25■□□□□ 0.67
SNRPN-202ENST00000390687 TNRC6CQ9HCJ0 1690 aaKnown RBP19.25■□□□□ 0.67
SNRPN-202ENST00000390687 RIC1Q4ADV7 1423 aa19.24■□□□□ 0.67
SNRPN-202ENST00000390687 CACNA1SQ13698 1873 aa19.24■□□□□ 0.67
SNRPN-202ENST00000390687 SOGA3Q5TF21 947 aa19.24■□□□□ 0.67
SNRPN-202ENST00000390687 OLFM4Q6UX06 510 aa19.24■□□□□ 0.67
SNRPN-202ENST00000390687 NLRP3Q96P20 1036 aa19.24■□□□□ 0.67
SNRPN-202ENST00000390687 ISCA1Q9BUE6 129 aa19.24■□□□□ 0.67
SNRPN-202ENST00000390687 CHMP4AQ9BY43 222 aa19.24■□□□□ 0.67
SNRPN-202ENST00000390687 KIF3CO14782 793 aa19.23■□□□□ 0.67
SNRPN-202ENST00000390687 ZNF428Q96B54 188 aa19.23■□□□□ 0.67
SNRPN-202ENST00000390687 TRMT112Q9UI30 125 aaKnown RBP19.23■□□□□ 0.67
SNRPN-202ENST00000390687 FER1L6Q2WGJ9 1857 aa19.23■□□□□ 0.67
SNRPN-202ENST00000390687 ARFGEF2Q9Y6D5 1785 aa19.22■□□□□ 0.67
SNRPN-202ENST00000390687 ATP5J2-PTCD1G3V325 749 aa19.22■□□□□ 0.67
SNRPN-202ENST00000390687 RPGRQ92834 1020 aaKnown RBP19.22■□□□□ 0.67
SNRPN-202ENST00000390687 TAOK3Q9H2K8 898 aa19.22■□□□□ 0.67
SNRPN-202ENST00000390687 RNF123Q5XPI4 1314 aa19.22■□□□□ 0.67
SNRPN-202ENST00000390687 LTBP3Q9NS15 1303 aa19.22■□□□□ 0.67
SNRPN-202ENST00000390687 ANKRD36CQ5JPF3 1778 aa19.22■□□□□ 0.67
SNRPN-202ENST00000390687 CCDC88AQ3V6T2 1871 aa19.22■□□□□ 0.67
SNRPN-202ENST00000390687 TWISTNBQ3B726 338 aaPredicted RBP19.21■□□□□ 0.67
SNRPN-202ENST00000390687 RIC3Q7Z5B4 369 aa19.21■□□□□ 0.67
SNRPN-202ENST00000390687 NMRK2Q9NPI5 230 aa19.21■□□□□ 0.67
SNRPN-202ENST00000390687 SPINK5Q9NQ38 1064 aaPredicted RBP19.21■□□□□ 0.67
SNRPN-202ENST00000390687 CEP350Q5VT06 3117 aa19.21■□□□□ 0.67
SNRPN-202ENST00000390687 TCERG1O14776 1098 aaKnown RBP19.2■□□□□ 0.66
SNRPN-202ENST00000390687 HCLS1P14317 486 aaPredicted RBP19.2■□□□□ 0.66
SNRPN-202ENST00000390687 GOLGA2Q08379 1002 aa19.2■□□□□ 0.66
SNRPN-202ENST00000390687 TRIM28Q13263 835 aaKnown RBP19.2■□□□□ 0.66
SNRPN-202ENST00000390687 CCDC93Q567U6 631 aa19.2■□□□□ 0.66
SNRPN-202ENST00000390687 CRAMP1Q96RY5 1269 aa19.2■□□□□ 0.66
SNRPN-202ENST00000390687 FANCIQ9NVI1 1328 aa19.2■□□□□ 0.66
SNRPN-202ENST00000390687 RBM17Q96I25 401 aaKnown RBP19.2■□□□□ 0.66
SNRPN-202ENST00000390687 SH3TC1Q8TE82 1336 aa19.2■□□□□ 0.66
SNRPN-202ENST00000390687 ZC3H4Q9UPT8 1303 aaKnown RBP19.2■□□□□ 0.66
SNRPN-202ENST00000390687 RTKN2Q8IZC4 609 aa19.19■□□□□ 0.66
SNRPN-202ENST00000390687 KDM2BQ8NHM5 1336 aa19.19■□□□□ 0.66
SNRPN-202ENST00000390687 FAM89AQ96GI7 184 aa19.19■□□□□ 0.66
SNRPN-202ENST00000390687 GLTPD2A6NH11 291 aa19.17■□□□□ 0.66
SNRPN-202ENST00000390687 VAMP4O75379 141 aa19.17■□□□□ 0.66
SNRPN-202ENST00000390687 SLC4A2P04920 1241 aa19.17■□□□□ 0.66
SNRPN-202ENST00000390687 FKBP4Q02790 459 aaKnown RBP eCLIP19.17■□□□□ 0.66
SNRPN-202ENST00000390687 RRAGCQ9HB90 399 aa19.17■□□□□ 0.66
SNRPN-202ENST00000390687 EXOSC9Q06265 439 aaKnown RBP19.16■□□□□ 0.66
SNRPN-202ENST00000390687 SLC51AQ86UW1 340 aa19.16■□□□□ 0.66
SNRPN-202ENST00000390687 MYD88Q99836 296 aa19.16■□□□□ 0.66
SNRPN-202ENST00000390687 STK31Q9BXU1 1019 aa19.16■□□□□ 0.66
SNRPN-202ENST00000390687 DDX58O95786 925 aaKnown RBP19.15■□□□□ 0.66
SNRPN-202ENST00000390687 RTL5Q5HYW3 569 aaPredicted RBP19.15■□□□□ 0.66
SNRPN-202ENST00000390687 CC2D2BQ6DHV5 1058 aa19.15■□□□□ 0.66
SNRPN-202ENST00000390687 G2E3Q7L622 706 aa19.15■□□□□ 0.66
SNRPN-202ENST00000390687 METTL22Q9BUU2 404 aaPredicted RBP19.15■□□□□ 0.66
SNRPN-202ENST00000390687 ZNF277Q9NRM2 450 aaPredicted RBP19.15■□□□□ 0.66
SNRPN-202ENST00000390687 PI4KAP2A4QPH2 592 aa19.15■□□□□ 0.66
SNRPN-202ENST00000390687 KSR2Q6VAB6 950 aa19.15■□□□□ 0.66
SNRPN-202ENST00000390687 PI4KAP1Q8N8J0 262 aa19.15■□□□□ 0.66
SNRPN-202ENST00000390687 MAP3K2Q9Y2U5 619 aa19.15■□□□□ 0.66
SNRPN-202ENST00000390687 DICER1Q9UPY3 1922 aaKnown RBP19.14■□□□□ 0.66
SNRPN-202ENST00000390687 SNED1Q8TER0 1413 aa19.14■□□□□ 0.66
SNRPN-202ENST00000390687 ABCC4O15439 1325 aa19.14■□□□□ 0.65
SNRPN-202ENST00000390687 ZNF521Q96K83 1311 aa19.14■□□□□ 0.65
SNRPN-202ENST00000390687 PPEF1O14829 653 aaPredicted RBP19.14■□□□□ 0.65
SNRPN-202ENST00000390687 MYH16Q9H6N6 1097 aa19.14■□□□□ 0.65
SNRPN-202ENST00000390687 TOMM70O94826 608 aa19.13■□□□□ 0.65
SNRPN-202ENST00000390687 DPY19L2Q6NUT2 758 aa19.13■□□□□ 0.65
SNRPN-202ENST00000390687 ZBTB38Q8NAP3 1195 aaPredicted RBP19.13■□□□□ 0.65
SNRPN-202ENST00000390687 CCDC191Q8NCU4 936 aa19.13■□□□□ 0.65
SNRPN-202ENST00000390687 PSMD1Q99460 953 aa19.13■□□□□ 0.65
SNRPN-202ENST00000390687 CCER2I3L3R5 266 aa19.12■□□□□ 0.65
SNRPN-202ENST00000390687 BBOX1O75936 387 aa19.12■□□□□ 0.65
SNRPN-202ENST00000390687 SF3B3Q15393 1217 aaKnown RBP19.12■□□□□ 0.65
SNRPN-202ENST00000390687 DDX46Q7L014 1031 aaKnown RBP19.12■□□□□ 0.65
SNRPN-202ENST00000390687 ATP6V0A2Q9Y487 856 aa19.12■□□□□ 0.65
SNRPN-202ENST00000390687 LAMB2P55268 1798 aa19.12■□□□□ 0.65
SNRPN-202ENST00000390687 TIAM2Q8IVF5 1701 aa19.11■□□□□ 0.65
SNRPN-202ENST00000390687 IRS4O14654 1257 aaPredicted RBP19.11■□□□□ 0.65
SNRPN-202ENST00000390687 GRIPAP1Q4V328 841 aa19.11■□□□□ 0.65
SNRPN-202ENST00000390687 CWC25Q9NXE8 425 aaPredicted RBP19.11■□□□□ 0.65
SNRPN-202ENST00000390687 IGKV5-2P06315 115 aa19.1■□□□□ 0.65
SNRPN-202ENST00000390687 IARSP41252 1262 aaKnown RBP19.1■□□□□ 0.65
SNRPN-202ENST00000390687 JARID2Q92833 1246 aaPredicted RBP19.1■□□□□ 0.65
SNRPN-202ENST00000390687 POTECB2RU33 542 aa19.1■□□□□ 0.65
SNRPN-202ENST00000390687 DDNO94850 711 aaPredicted RBP19.1■□□□□ 0.65
SNRPN-202ENST00000390687 PCCAP05165 728 aaPredicted RBP19.1■□□□□ 0.65
SNRPN-202ENST00000390687 VEGFAP15692 232 aaPredicted RBP19.1■□□□□ 0.65
SNRPN-202ENST00000390687 FLIIQ13045 1269 aa19.1■□□□□ 0.65
SNRPN-202ENST00000390687 GRAPQ13588 217 aa19.1■□□□□ 0.65
SNRPN-202ENST00000390687 SP8Q8IXZ3 490 aa19.1■□□□□ 0.65
SNRPN-202ENST00000390687 GRAPLQ8TC17 118 aaPredicted RBP19.1■□□□□ 0.65
SNRPN-202ENST00000390687 DDX60Q8IY21 1712 aaKnown RBP19.1■□□□□ 0.65
SNRPN-202ENST00000390687 C16orf71Q8IYS4 520 aaPredicted RBP19.09■□□□□ 0.65
SNRPN-202ENST00000390687 TMX4Q9H1E5 349 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms