RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 KIF15Q9NS87 1388 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 PRDM15P57071 1507 aaPredicted RBP3.51□□□□□ -1.85
TRAV41-201ENST00000390468 ZMYM4Q5VZL5 1548 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 FAM135AQ9P2D6 1515 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 F11P03951 625 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 CSB-PGBD3P0DP91 1061 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 BMP4P12644 408 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 NCLP19338 710 aaKnown RBP3.51□□□□□ -1.85
TRAV41-201ENST00000390468 GPC1P35052 558 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 MAP2K3P46734 347 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 RBM10P98175 930 aaKnown RBP3.51□□□□□ -1.85
TRAV41-201ENST00000390468 C1orf229Q6ZS94 237 aaPredicted RBP3.51□□□□□ -1.85
TRAV41-201ENST00000390468 PGBD3Q8N328 593 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 Q8N3U1 123 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 TRIM34Q9BYJ4 488 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 MAGI2Q86UL8 1455 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 MROH2AA6NES4 1674 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 PREX1Q8TCU6 1659 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 RTEL1-TNFRSF6BF6WH68 1400 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 SCAPERQ9BY12 1400 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 TRAPPC8Q9Y2L5 1435 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 MROH1Q8NDA8 1641 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 PPLO60437 1756 aa3.51□□□□□ -1.85
TRAV41-201ENST00000390468 SIGLEC1Q9BZZ2 1709 aa3.5□□□□□ -1.85
TRAV41-201ENST00000390468 ARHGEF40Q8TER5 1519 aa3.5□□□□□ -1.85
TRAV41-201ENST00000390468 DENND4BO75064 1496 aaPredicted RBP3.5□□□□□ -1.85
TRAV41-201ENST00000390468 PZPP20742 1482 aa3.5□□□□□ -1.85
TRAV41-201ENST00000390468 COL8A1P27658 744 aa3.5□□□□□ -1.85
TRAV41-201ENST00000390468 GTF2E1P29083 439 aaPredicted RBP3.5□□□□□ -1.85
TRAV41-201ENST00000390468 ERVK-9P63128 1117 aa3.5□□□□□ -1.85
TRAV41-201ENST00000390468 CLN3Q13286 438 aa3.5□□□□□ -1.85
TRAV41-201ENST00000390468 TMEM214Q6NUQ4 689 aaKnown RBP3.5□□□□□ -1.85
TRAV41-201ENST00000390468 EDARADDQ8WWZ3 215 aa3.5□□□□□ -1.85
TRAV41-201ENST00000390468 KLRG1Q96E93 195 aa3.5□□□□□ -1.85
TRAV41-201ENST00000390468 GRIP2Q9C0E4 1043 aa3.5□□□□□ -1.85
TRAV41-201ENST00000390468 SUV39H2Q9H5I1 410 aa3.5□□□□□ -1.85
TRAV41-201ENST00000390468 PHF24Q9UPV7 400 aa3.5□□□□□ -1.85
TRAV41-201ENST00000390468 NOP58Q9Y2X3 529 aaKnown RBP3.5□□□□□ -1.85
TRAV41-201ENST00000390468 SPAG9O60271 1321 aaKnown RBP3.49□□□□□ -1.85
TRAV41-201ENST00000390468 MLH3Q9UHC1 1453 aa3.49□□□□□ -1.85
TRAV41-201ENST00000390468 RRP9O43818 475 aaKnown RBP3.49□□□□□ -1.85
TRAV41-201ENST00000390468 THBS1P07996 1170 aa3.49□□□□□ -1.85
TRAV41-201ENST00000390468 CENPCQ03188 943 aa3.49□□□□□ -1.85
TRAV41-201ENST00000390468 GNASQ5JWF2 1037 aa3.49□□□□□ -1.85
TRAV41-201ENST00000390468 RNF20Q5VTR2 975 aa3.49□□□□□ -1.85
TRAV41-201ENST00000390468 CNKSR1Q969H4 720 aa3.49□□□□□ -1.85
TRAV41-201ENST00000390468 ABHD17AQ96GS6 310 aa3.49□□□□□ -1.85
TRAV41-201ENST00000390468 ZSCAN10Q96SZ4 725 aaPredicted RBP3.49□□□□□ -1.85
TRAV41-201ENST00000390468 OSBPL3Q9H4L5 887 aa3.49□□□□□ -1.85
TRAV41-201ENST00000390468 USP35Q9P2H5 1018 aa3.49□□□□□ -1.85
TRAV41-201ENST00000390468 GGA1Q9UJY5 639 aa3.49□□□□□ -1.85
TRAV41-201ENST00000390468 VWDEQ8N2E2 1590 aa3.49□□□□□ -1.85
TRAV41-201ENST00000390468 REREQ9P2R6 1566 aa3.49□□□□□ -1.85
TRAV41-201ENST00000390468 EFCAB6Q5THR3 1501 aa3.49□□□□□ -1.85
TRAV41-201ENST00000390468 CLTCL1P53675 1640 aa3.48□□□□□ -1.85
TRAV41-201ENST00000390468 TRPM1Q7Z4N2 1603 aa3.48□□□□□ -1.85
TRAV41-201ENST00000390468 A2MP01023 1474 aa3.48□□□□□ -1.85
TRAV41-201ENST00000390468 KIAA1210Q9ULL0 1709 aa3.48□□□□□ -1.85
TRAV41-201ENST00000390468 C1QTNF9BB2RNN3 333 aa3.48□□□□□ -1.85
TRAV41-201ENST00000390468 SPATA31C2B4DYI2 1134 aa3.48□□□□□ -1.85
TRAV41-201ENST00000390468 STAU1O95793 577 aaKnown RBP3.48□□□□□ -1.85
TRAV41-201ENST00000390468 MYCP01106 439 aaPredicted RBP3.48□□□□□ -1.85
TRAV41-201ENST00000390468 IL2RAP01589 272 aa3.48□□□□□ -1.85
TRAV41-201ENST00000390468 FAM69CQ0P6D2 419 aa3.48□□□□□ -1.85
TRAV41-201ENST00000390468 HSP90AA2PQ14568 343 aaPredicted RBP3.48□□□□□ -1.85
TRAV41-201ENST00000390468 GOLGA6L1Q8N7Z2 621 aa3.48□□□□□ -1.85
TRAV41-201ENST00000390468 PCMTD1Q96MG8 357 aaPredicted RBP3.48□□□□□ -1.85
TRAV41-201ENST00000390468 GDF2Q9UK05 429 aaPredicted RBP3.48□□□□□ -1.85
TRAV41-201ENST00000390468 TRPM2O94759 1503 aa3.48□□□□□ -1.85
TRAV41-201ENST00000390468 NUP155O75694 1391 aa3.48□□□□□ -1.85
TRAV41-201ENST00000390468 KANK1Q14678 1352 aa3.48□□□□□ -1.85
TRAV41-201ENST00000390468 TONSLQ96HA7 1378 aa3.48□□□□□ -1.85
TRAV41-201ENST00000390468 A0A1B0GTH6 734 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 NEURL1BA8MQ27 555 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 C2CD2LO14523 706 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 FGFR3P22607 806 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 MSX1P28360 303 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 ANP32AP39687 249 aaKnown RBP3.47□□□□□ -1.85
TRAV41-201ENST00000390468 PLA2G4AP47712 749 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 CTBSQ01459 385 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 CNGB1Q14028 1251 aaPredicted RBP3.47□□□□□ -1.85
TRAV41-201ENST00000390468 DOC2BQ14184 412 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 C4orf17Q53FE4 359 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 EFHC2Q5JST6 749 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 FAM43AQ8N2R8 423 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 AFAP1Q8N556 730 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 MPHOSPH9Q99550 1183 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 ESYT1Q9BSJ8 1104 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 CDCA7Q9BWT1 371 aaPredicted RBP3.47□□□□□ -1.85
TRAV41-201ENST00000390468 CFHR5Q9BXR6 569 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 SEMA6BQ9H3T3 888 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 LRRC4BQ9NT99 713 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 ZNF330Q9Y3S2 320 aaPredicted RBP3.47□□□□□ -1.85
TRAV41-201ENST00000390468 PIK3C2BO00750 1634 aa3.47□□□□□ -1.85
TRAV41-201ENST00000390468 SETD1BQ9UPS6 1966 aaKnown RBP3.47□□□□□ -1.85
TRAV41-201ENST00000390468 RPRD2Q5VT52 1461 aaKnown RBP3.47□□□□□ -1.85
TRAV41-201ENST00000390468 C3P01024 1663 aa3.46□□□□□ -1.85
TRAV41-201ENST00000390468 RIMS1Q86UR5 1692 aaKnown RBP3.46□□□□□ -1.85
TRAV41-201ENST00000390468 ABCC3O15438 1527 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 LMTK2Q8IWU2 1503 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms