RNA–Protein interactions for RNA: ENST00000390372.3

TRBV5-5-201, Transcript of T cell receptor beta variable 5-5, humanhuman

APPRIS P1 BASIC

Gene TRBV5-5, Length 350 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5-201ENST00000390372 C21orf2O43822 256 aa14.06□□□□□ -0.16
TRBV5-5-201ENST00000390372 SLC4A2P04920 1241 aa14.06□□□□□ -0.16
TRBV5-5-201ENST00000390372 HSP90B1P14625 803 aaKnown RBP14.06□□□□□ -0.16
TRBV5-5-201ENST00000390372 EXOSC9Q06265 439 aaKnown RBP14.06□□□□□ -0.16
TRBV5-5-201ENST00000390372 TRIM28Q13263 835 aaKnown RBP14.06□□□□□ -0.16
TRBV5-5-201ENST00000390372 CRY2Q49AN0 593 aa14.06□□□□□ -0.16
TRBV5-5-201ENST00000390372 SLC10A5Q5PT55 438 aa14.06□□□□□ -0.16
TRBV5-5-201ENST00000390372 RBM17Q96I25 401 aaKnown RBP14.06□□□□□ -0.16
TRBV5-5-201ENST00000390372 SH3TC1Q8TE82 1336 aa14.06□□□□□ -0.16
TRBV5-5-201ENST00000390372 GOLGB1Q14789 3259 aaKnown RBP14.05□□□□□ -0.16
TRBV5-5-201ENST00000390372 VAMP4O75379 141 aa14.05□□□□□ -0.16
TRBV5-5-201ENST00000390372 NEXNQ0ZGT2 675 aa14.05□□□□□ -0.16
TRBV5-5-201ENST00000390372 C9orf131Q5VYM1 1079 aa14.05□□□□□ -0.16
TRBV5-5-201ENST00000390372 ISCA1Q9BUE6 129 aa14.05□□□□□ -0.16
TRBV5-5-201ENST00000390372 TMX4Q9H1E5 349 aaPredicted RBP14.05□□□□□ -0.16
TRBV5-5-201ENST00000390372 ZNF219Q9P2Y4 722 aaPredicted RBP14.05□□□□□ -0.16
TRBV5-5-201ENST00000390372 ABCC12Q96J65 1359 aa14.05□□□□□ -0.16
TRBV5-5-201ENST00000390372 UTRNP46939 3433 aa14.04□□□□□ -0.16
TRBV5-5-201ENST00000390372 E9PSI1 815 aa14.04□□□□□ -0.16
TRBV5-5-201ENST00000390372 ATP5J2-PTCD1G3V325 749 aa14.04□□□□□ -0.16
TRBV5-5-201ENST00000390372 LMNB1P20700 586 aa14.04□□□□□ -0.16
TRBV5-5-201ENST00000390372 HOXA10P31260 410 aaPredicted RBP14.04□□□□□ -0.16
TRBV5-5-201ENST00000390372 KSR2Q6VAB6 950 aa14.04□□□□□ -0.16
TRBV5-5-201ENST00000390372 GPBP1L1Q9HC44 474 aaPredicted RBP14.04□□□□□ -0.16
TRBV5-5-201ENST00000390372 RNF181Q9P0P0 153 aa14.04□□□□□ -0.16
TRBV5-5-201ENST00000390372 ZNF521Q96K83 1311 aa14.04□□□□□ -0.16
TRBV5-5-201ENST00000390372 COL11A2P13942 1736 aaPredicted RBP14.04□□□□□ -0.16
TRBV5-5-201ENST00000390372 ANKRD36CQ5JPF3 1778 aa14.04□□□□□ -0.16
TRBV5-5-201ENST00000390372 TCERG1O14776 1098 aaKnown RBP14.03□□□□□ -0.16
TRBV5-5-201ENST00000390372 GRIPAP1Q4V328 841 aa14.03□□□□□ -0.16
TRBV5-5-201ENST00000390372 CCDC93Q567U6 631 aa14.03□□□□□ -0.16
TRBV5-5-201ENST00000390372 CC2D2BQ6DHV5 1058 aa14.03□□□□□ -0.16
TRBV5-5-201ENST00000390372 RTKN2Q8IZC4 609 aa14.03□□□□□ -0.16
TRBV5-5-201ENST00000390372 CCDC191Q8NCU4 936 aa14.03□□□□□ -0.16
TRBV5-5-201ENST00000390372 CRAMP1Q96RY5 1269 aa14.03□□□□□ -0.16
TRBV5-5-201ENST00000390372 MYD88Q99836 296 aa14.03□□□□□ -0.16
TRBV5-5-201ENST00000390372 METTL22Q9BUU2 404 aaPredicted RBP14.03□□□□□ -0.16
TRBV5-5-201ENST00000390372 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
TRBV5-5-201ENST00000390372 MAP3K2Q9Y2U5 619 aa14.03□□□□□ -0.16
TRBV5-5-201ENST00000390372 ADCY9O60503 1353 aa14.03□□□□□ -0.16
TRBV5-5-201ENST00000390372 LTBP3Q9NS15 1303 aa14.02□□□□□ -0.17
TRBV5-5-201ENST00000390372 ZC3H4Q9UPT8 1303 aaKnown RBP14.02□□□□□ -0.17
TRBV5-5-201ENST00000390372 PI4KAP2A4QPH2 592 aa14.02□□□□□ -0.17
TRBV5-5-201ENST00000390372 MIER1Q8N108 512 aa14.02□□□□□ -0.17
TRBV5-5-201ENST00000390372 PI4KAP1Q8N8J0 262 aa14.02□□□□□ -0.17
TRBV5-5-201ENST00000390372 TAOK3Q9H2K8 898 aa14.02□□□□□ -0.17
TRBV5-5-201ENST00000390372 CWC25Q9NXE8 425 aaPredicted RBP14.02□□□□□ -0.17
TRBV5-5-201ENST00000390372 HCLS1P14317 486 aaPredicted RBP14.01□□□□□ -0.17
TRBV5-5-201ENST00000390372 RASSF7Q02833 373 aa14.01□□□□□ -0.17
TRBV5-5-201ENST00000390372 FLIIQ13045 1269 aa14.01□□□□□ -0.17
TRBV5-5-201ENST00000390372 FKBP5Q13451 457 aaPredicted RBP14.01□□□□□ -0.17
TRBV5-5-201ENST00000390372 DDX46Q7L014 1031 aaKnown RBP14.01□□□□□ -0.17
TRBV5-5-201ENST00000390372 ZBTB38Q8NAP3 1195 aaPredicted RBP14.01□□□□□ -0.17
TRBV5-5-201ENST00000390372 FAM89AQ96GI7 184 aa14.01□□□□□ -0.17
TRBV5-5-201ENST00000390372 KDM2BQ8NHM5 1336 aa14□□□□□ -0.17
TRBV5-5-201ENST00000390372 NFKBIEO00221 500 aa14□□□□□ -0.17
TRBV5-5-201ENST00000390372 BBOX1O75936 387 aa14□□□□□ -0.17
TRBV5-5-201ENST00000390372 ZNF526Q8TF50 670 aaPredicted RBP14□□□□□ -0.17
TRBV5-5-201ENST00000390372 C7orf43Q8WVR3 580 aa14□□□□□ -0.17
TRBV5-5-201ENST00000390372 ARFGEF2Q9Y6D5 1785 aa14□□□□□ -0.17
TRBV5-5-201ENST00000390372 TNRC6CQ9HCJ0 1690 aaKnown RBP13.99□□□□□ -0.17
TRBV5-5-201ENST00000390372 IRS4O14654 1257 aaPredicted RBP13.99□□□□□ -0.17
TRBV5-5-201ENST00000390372 PPEF1O14829 653 aaPredicted RBP13.99□□□□□ -0.17
TRBV5-5-201ENST00000390372 PCCAP05165 728 aaPredicted RBP13.99□□□□□ -0.17
TRBV5-5-201ENST00000390372 FKBP4Q02790 459 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRBV5-5-201ENST00000390372 SLFN5Q08AF3 891 aa13.99□□□□□ -0.17
TRBV5-5-201ENST00000390372 SYNE4Q8N205 404 aa13.99□□□□□ -0.17
TRBV5-5-201ENST00000390372 ZNF428Q96B54 188 aa13.99□□□□□ -0.17
TRBV5-5-201ENST00000390372 RTL5Q5HYW3 569 aaPredicted RBP13.98□□□□□ -0.17
TRBV5-5-201ENST00000390372 DPY19L2Q6NUT2 758 aa13.98□□□□□ -0.17
TRBV5-5-201ENST00000390372 C3orf67Q6ZVT6 689 aa13.98□□□□□ -0.17
TRBV5-5-201ENST00000390372 G2E3Q7L622 706 aa13.98□□□□□ -0.17
TRBV5-5-201ENST00000390372 TMC4Q7Z404 712 aa13.98□□□□□ -0.17
TRBV5-5-201ENST00000390372 SLX4Q8IY92 1834 aa13.98□□□□□ -0.17
TRBV5-5-201ENST00000390372 SF3B3Q15393 1217 aaKnown RBP13.97□□□□□ -0.17
TRBV5-5-201ENST00000390372 DNAAF4Q8WXU2 420 aa13.97□□□□□ -0.17
TRBV5-5-201ENST00000390372 ATP6V0A2Q9Y487 856 aa13.97□□□□□ -0.17
TRBV5-5-201ENST00000390372 ABCC4O15439 1325 aa13.96□□□□□ -0.17
TRBV5-5-201ENST00000390372 PDE8AO60658 829 aa13.96□□□□□ -0.17
TRBV5-5-201ENST00000390372 GRAPQ13588 217 aa13.96□□□□□ -0.17
TRBV5-5-201ENST00000390372 LINS1Q8NG48 757 aa13.96□□□□□ -0.17
TRBV5-5-201ENST00000390372 GRAPLQ8TC17 118 aaPredicted RBP13.96□□□□□ -0.17
TRBV5-5-201ENST00000390372 PSMD1Q99460 953 aa13.96□□□□□ -0.17
TRBV5-5-201ENST00000390372 CACNA1SQ13698 1873 aa13.95□□□□□ -0.18
TRBV5-5-201ENST00000390372 CDHR2Q9BYE9 1310 aa13.95□□□□□ -0.18
TRBV5-5-201ENST00000390372 NEURL1BA8MQ27 555 aa13.95□□□□□ -0.18
TRBV5-5-201ENST00000390372 IGKV5-2P06315 115 aa13.95□□□□□ -0.18
TRBV5-5-201ENST00000390372 CT47B1P0C2W7 299 aaPredicted RBP13.95□□□□□ -0.18
TRBV5-5-201ENST00000390372 CCDC152Q4G0S7 254 aa13.95□□□□□ -0.18
TRBV5-5-201ENST00000390372 SP8Q8IXZ3 490 aa13.95□□□□□ -0.18
TRBV5-5-201ENST00000390372 SUPT20HQ8NEM7 779 aa13.95□□□□□ -0.18
TRBV5-5-201ENST00000390372 GLTPD2A6NH11 291 aa13.94□□□□□ -0.18
TRBV5-5-201ENST00000390372 CWF19L2Q2TBE0 894 aaKnown RBP13.94□□□□□ -0.18
TRBV5-5-201ENST00000390372 FER1L6Q2WGJ9 1857 aa13.94□□□□□ -0.18
TRBV5-5-201ENST00000390372 OLFM4Q6UX06 510 aa13.94□□□□□ -0.18
TRBV5-5-201ENST00000390372 C16orf71Q8IYS4 520 aaPredicted RBP13.94□□□□□ -0.18
TRBV5-5-201ENST00000390372 JDP2Q8WYK2 163 aa13.94□□□□□ -0.18
TRBV5-5-201ENST00000390372 CDCA7LQ96GN5 454 aa13.94□□□□□ -0.18
TRBV5-5-201ENST00000390372 VPS33BQ9H267 617 aa13.94□□□□□ -0.18
TRBV5-5-201ENST00000390372 CACNA1FO60840 1977 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms