RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 FAM193AP78312 1265 aa15.3■□□□□ 0.04
TRAPPC9-201ENST00000389328 KIF2CQ99661 725 aa15.3■□□□□ 0.04
TRAPPC9-201ENST00000389328 RTL1A6NKG5 1358 aa15.3■□□□□ 0.04
TRAPPC9-201ENST00000389328 SYNMO15061 1565 aa15.3■□□□□ 0.04
TRAPPC9-201ENST00000389328 SYT10Q6XYQ8 523 aa15.29■□□□□ 0.04
TRAPPC9-201ENST00000389328 Q6ZUG5 572 aa15.29■□□□□ 0.04
TRAPPC9-201ENST00000389328 LMOD1P29536 600 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC9-201ENST00000389328 HSPA4P34932 840 aa15.29■□□□□ 0.04
TRAPPC9-201ENST00000389328 GTF3C6Q969F1 213 aa15.29■□□□□ 0.04
TRAPPC9-201ENST00000389328 USP16Q9Y5T5 823 aa15.29■□□□□ 0.04
TRAPPC9-201ENST00000389328 HAND2P61296 217 aa15.29■□□□□ 0.04
TRAPPC9-201ENST00000389328 CTNNA3Q9UI47 895 aa15.29■□□□□ 0.04
TRAPPC9-201ENST00000389328 ZFYVE9O95405 1425 aa15.29■□□□□ 0.04
TRAPPC9-201ENST00000389328 RAD50Q92878 1312 aa15.28■□□□□ 0.04
TRAPPC9-201ENST00000389328 GOLIM4O00461 696 aa15.28■□□□□ 0.04
TRAPPC9-201ENST00000389328 KIF4BQ2VIQ3 1234 aa15.28■□□□□ 0.04
TRAPPC9-201ENST00000389328 MARCH6O60337 910 aa15.28■□□□□ 0.04
TRAPPC9-201ENST00000389328 LMAN1P49257 510 aa15.28■□□□□ 0.04
TRAPPC9-201ENST00000389328 IMMTQ16891 758 aaKnown RBP15.28■□□□□ 0.04
TRAPPC9-201ENST00000389328 HMG20BQ9P0W2 317 aa15.28■□□□□ 0.04
TRAPPC9-201ENST00000389328 CEP126Q9P2H0 1117 aa15.28■□□□□ 0.04
TRAPPC9-201ENST00000389328 DACH1Q9UI36 760 aa15.28■□□□□ 0.04
TRAPPC9-201ENST00000389328 KDM5AP29375 1690 aaKnown RBP15.28■□□□□ 0.04
TRAPPC9-201ENST00000389328 HMGB1P09429 215 aaKnown RBP15.28■□□□□ 0.04
TRAPPC9-201ENST00000389328 ZNF75DP51815 510 aa15.28■□□□□ 0.04
TRAPPC9-201ENST00000389328 CDC37L1Q7L3B6 337 aa15.27■□□□□ 0.04
TRAPPC9-201ENST00000389328 CCDC82Q8N4S0 544 aa15.27■□□□□ 0.04
TRAPPC9-201ENST00000389328 CCDC150Q8NCX0 1101 aa15.27■□□□□ 0.04
TRAPPC9-201ENST00000389328 NUP133Q8WUM0 1156 aa15.27■□□□□ 0.04
TRAPPC9-201ENST00000389328 TBC1D2BQ9UPU7 963 aa15.27■□□□□ 0.04
TRAPPC9-201ENST00000389328 GOLGA8BA8MQT2 603 aa15.27■□□□□ 0.04
TRAPPC9-201ENST00000389328 SART3Q15020 963 aaKnown RBP15.27■□□□□ 0.04
TRAPPC9-201ENST00000389328 SYTL4Q96C24 671 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC9-201ENST00000389328 PHF23Q9BUL5 403 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC9-201ENST00000389328 ORC3Q9UBD5 711 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC9-201ENST00000389328 EPB41L2O43491 1005 aaKnown RBP15.27■□□□□ 0.03
TRAPPC9-201ENST00000389328 LIG1P18858 919 aa15.27■□□□□ 0.03
TRAPPC9-201ENST00000389328 XBP1P17861 261 aa15.27■□□□□ 0.03
TRAPPC9-201ENST00000389328 ELF2Q15723 593 aa15.27■□□□□ 0.03
TRAPPC9-201ENST00000389328 UNC5CLQ8IV45 518 aa15.27■□□□□ 0.03
TRAPPC9-201ENST00000389328 TRIM22Q8IYM9 498 aa15.27■□□□□ 0.03
TRAPPC9-201ENST00000389328 IFIT1P09914 478 aaKnown RBP15.26■□□□□ 0.03
TRAPPC9-201ENST00000389328 JAKMIP3Q5VZ66 844 aa15.26■□□□□ 0.03
TRAPPC9-201ENST00000389328 CNNM3Q8NE01 707 aa15.26■□□□□ 0.03
TRAPPC9-201ENST00000389328 MTMR7Q9Y216 660 aa15.26■□□□□ 0.03
TRAPPC9-201ENST00000389328 ATP10AO60312 1499 aa15.26■□□□□ 0.03
TRAPPC9-201ENST00000389328 UBASH3AP57075 661 aa15.26■□□□□ 0.03
TRAPPC9-201ENST00000389328 IFNKQ9P0W0 207 aa15.26■□□□□ 0.03
TRAPPC9-201ENST00000389328 CHST3Q7LGC8 479 aa15.26■□□□□ 0.03
TRAPPC9-201ENST00000389328 MRPS27Q92552 414 aaKnown RBP15.26■□□□□ 0.03
TRAPPC9-201ENST00000389328 SBNO2Q9Y2G9 1366 aa15.26■□□□□ 0.03
TRAPPC9-201ENST00000389328 CWF19L2Q2TBE0 894 aaKnown RBP15.25■□□□□ 0.03
TRAPPC9-201ENST00000389328 CCDC47Q96A33 483 aaKnown RBP15.25■□□□□ 0.03
TRAPPC9-201ENST00000389328 GTF2E1P29083 439 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC9-201ENST00000389328 FAM227BQ96M60 508 aa15.25■□□□□ 0.03
TRAPPC9-201ENST00000389328 SNRKQ9NRH2 765 aa15.25■□□□□ 0.03
TRAPPC9-201ENST00000389328 TTC41PQ6P2S7 1318 aa15.25■□□□□ 0.03
TRAPPC9-201ENST00000389328 CDKL5O76039 1030 aa15.25■□□□□ 0.03
TRAPPC9-201ENST00000389328 NPATQ14207 1427 aa15.25■□□□□ 0.03
TRAPPC9-201ENST00000389328 CCDC57Q2TAC2 916 aa15.25■□□□□ 0.03
TRAPPC9-201ENST00000389328 KIF5CO60282 957 aa15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 LEO1Q8WVC0 666 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 PDLIM2Q96JY6 352 aa15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 EYA1Q99502 592 aa15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 BRMS1Q9HCU9 246 aa15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 ATP5J2-PTCD1G3V325 749 aa15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 PTCD1O75127 700 aaKnown RBP15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 IDH1O75874 414 aaKnown RBP15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 PBRM1Q86U86 1689 aa15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 PATL2C9JE40 543 aaKnown RBP15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 MARCKSP29966 332 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 UBE3BQ7Z3V4 1068 aa15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 CCDC12Q8WUD4 166 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 ABCC1P33527 1531 aa15.24■□□□□ 0.03
TRAPPC9-201ENST00000389328 A0A087WZG4 1122 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 NBPF7P0C2Y1 421 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 ME3Q16798 604 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 ZSCAN25Q6NSZ9 544 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 CCDC144CPQ8IYA2 1237 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 RASEFQ8IZ41 740 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 CLSTN2Q9H4D0 955 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 CNNM1Q9NRU3 951 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 MTMR6Q9Y217 621 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 ZDHHC9Q9Y397 364 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 CLSTN1O94985 981 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 A0A1B0GVL5 298 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 MCM6Q14566 821 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 ERO1AQ96HE7 468 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 NRBP1Q9UHY1 535 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 ARHGEF5Q12774 1597 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 DMTNQ08495 405 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 APOBRQ0VD83 1088 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 CUL4AQ13619 759 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 ARFGAP3Q9NP61 516 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 HYPKQ9NX55 129 aa15.23■□□□□ 0.03
TRAPPC9-201ENST00000389328 TTC6Q86TZ1 520 aa15.22■□□□□ 0.03
TRAPPC9-201ENST00000389328 TRIM34Q9BYJ4 488 aa15.22■□□□□ 0.03
TRAPPC9-201ENST00000389328 TSPYL1Q9H0U9 437 aa15.22■□□□□ 0.03
TRAPPC9-201ENST00000389328 TRPM1Q7Z4N2 1603 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms