RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 C7orf43Q8WVR3 580 aa8.85□□□□□ -0.99
RNU6-40P-201ENST00000384254 CEP63Q96MT8 703 aa8.85□□□□□ -0.99
RNU6-40P-201ENST00000384254 MRS2Q9HD23 443 aa8.85□□□□□ -0.99
RNU6-40P-201ENST00000384254 PRPF40AO75400 957 aaKnown RBP8.84□□□□□ -0.99
RNU6-40P-201ENST00000384254 ALG1LQ6GMV1 187 aa8.84□□□□□ -0.99
RNU6-40P-201ENST00000384254 CMTR1Q8N1G2 835 aaKnown RBP8.84□□□□□ -0.99
RNU6-40P-201ENST00000384254 CRISPLD1Q9H336 500 aa8.84□□□□□ -0.99
RNU6-40P-201ENST00000384254 RUBCNLQ9H714 662 aa8.84□□□□□ -0.99
RNU6-40P-201ENST00000384254 DNMT3LQ9UJW3 386 aa8.84□□□□□ -0.99
RNU6-40P-201ENST00000384254 PNMA6FA0A0J9YX94 578 aa8.83□□□□□ -1
RNU6-40P-201ENST00000384254 UBAP1LF5GYI3 381 aa8.83□□□□□ -1
RNU6-40P-201ENST00000384254 TAGLNQ01995 201 aaKnown RBP8.83□□□□□ -1
RNU6-40P-201ENST00000384254 ZNF438Q7Z4V0 828 aa8.83□□□□□ -1
RNU6-40P-201ENST00000384254 NLRP8Q86W28 1048 aa8.83□□□□□ -1
RNU6-40P-201ENST00000384254 KIAA1522Q9P206 1035 aaPredicted RBP8.83□□□□□ -1
RNU6-40P-201ENST00000384254 DMGDHQ9UI17 866 aaKnown RBP8.83□□□□□ -1
RNU6-40P-201ENST00000384254 RTCBQ9Y3I0 505 aaKnown RBP8.83□□□□□ -1
RNU6-40P-201ENST00000384254 OPLAHO14841 1288 aa8.82□□□□□ -1
RNU6-40P-201ENST00000384254 INPP5BP32019 993 aa8.82□□□□□ -1
RNU6-40P-201ENST00000384254 FIGNL1Q6PIW4 674 aa8.82□□□□□ -1
RNU6-40P-201ENST00000384254 RIPOR1Q6ZS17 1223 aa8.82□□□□□ -1
RNU6-40P-201ENST00000384254 ATP13A2Q9NQ11 1180 aa8.82□□□□□ -1
RNU6-40P-201ENST00000384254 IGHA2P01877 340 aa8.81□□□□□ -1
RNU6-40P-201ENST00000384254 VAMP1P23763 118 aa8.81□□□□□ -1
RNU6-40P-201ENST00000384254 TYRO3Q06418 890 aa8.81□□□□□ -1
RNU6-40P-201ENST00000384254 LBRQ14739 615 aaKnown RBP8.81□□□□□ -1
RNU6-40P-201ENST00000384254 ENOX2Q16206 610 aaKnown RBP8.81□□□□□ -1
RNU6-40P-201ENST00000384254 PDE12Q6L8Q7 609 aaKnown RBP8.81□□□□□ -1
RNU6-40P-201ENST00000384254 CSRNP1Q96S65 589 aa8.81□□□□□ -1
RNU6-40P-201ENST00000384254 GGNBP2Q9H3C7 697 aa8.81□□□□□ -1
RNU6-40P-201ENST00000384254 CPNE3O75131 537 aaKnown RBP8.8□□□□□ -1
RNU6-40P-201ENST00000384254 PSMD2Q13200 908 aa8.8□□□□□ -1
RNU6-40P-201ENST00000384254 SNX29Q8TEQ0 813 aa8.8□□□□□ -1
RNU6-40P-201ENST00000384254 FBF1Q8TES7 1133 aa8.8□□□□□ -1
RNU6-40P-201ENST00000384254 KLRG1Q96E93 195 aa8.8□□□□□ -1
RNU6-40P-201ENST00000384254 DUSP9Q99956 384 aaKnown RBP8.8□□□□□ -1
RNU6-40P-201ENST00000384254 DNAJC25Q9H1X3 360 aa8.8□□□□□ -1
RNU6-40P-201ENST00000384254 SENP2Q9HC62 589 aa8.8□□□□□ -1
RNU6-40P-201ENST00000384254 BRD7Q9NPI1 651 aa8.8□□□□□ -1
RNU6-40P-201ENST00000384254 USP20Q9Y2K6 914 aa8.8□□□□□ -1
RNU6-40P-201ENST00000384254 A6NHS1 94 aa8.79□□□□□ -1
RNU6-40P-201ENST00000384254 H7C1W4 665 aa8.79□□□□□ -1
RNU6-40P-201ENST00000384254 ORC1Q13415 861 aa8.79□□□□□ -1
RNU6-40P-201ENST00000384254 SAMD5Q5TGI4 173 aa8.79□□□□□ -1
RNU6-40P-201ENST00000384254 KIFC2Q96AC6 838 aa8.79□□□□□ -1
RNU6-40P-201ENST00000384254 PARP2Q9UGN5 583 aa8.79□□□□□ -1
RNU6-40P-201ENST00000384254 EIF1AYO14602 144 aaKnown RBP8.78□□□□□ -1
RNU6-40P-201ENST00000384254 ST8SIA5O15466 376 aa8.78□□□□□ -1
RNU6-40P-201ENST00000384254 XYLBO75191 536 aa8.78□□□□□ -1
RNU6-40P-201ENST00000384254 TSNAXIP1Q2TAA8 658 aa8.78□□□□□ -1
RNU6-40P-201ENST00000384254 AAASQ9NRG9 546 aa8.78□□□□□ -1
RNU6-40P-201ENST00000384254 ATXN7O15265 892 aaPredicted RBP8.77□□□□□ -1.01
RNU6-40P-201ENST00000384254 SORBS3O60504 671 aa8.77□□□□□ -1.01
RNU6-40P-201ENST00000384254 PHACTR2O75167 634 aa8.77□□□□□ -1.01
RNU6-40P-201ENST00000384254 TCF3P15923 654 aa8.77□□□□□ -1.01
RNU6-40P-201ENST00000384254 XKR5Q6UX68 686 aa8.77□□□□□ -1.01
RNU6-40P-201ENST00000384254 NUCKS1Q9H1E3 243 aaKnown RBP8.77□□□□□ -1.01
RNU6-40P-201ENST00000384254 ELP3Q9H9T3 547 aa8.77□□□□□ -1.01
RNU6-40P-201ENST00000384254 C11orf16Q9NQ32 467 aa8.77□□□□□ -1.01
RNU6-40P-201ENST00000384254 VTI1BQ9UEU0 232 aa8.77□□□□□ -1.01
RNU6-40P-201ENST00000384254 WWC3Q9ULE0 1092 aa8.77□□□□□ -1.01
RNU6-40P-201ENST00000384254 SPG7Q9UQ90 795 aa8.77□□□□□ -1.01
RNU6-40P-201ENST00000384254 TNFRSF21O75509 655 aa8.76□□□□□ -1.01
RNU6-40P-201ENST00000384254 PTSQ03393 145 aa8.76□□□□□ -1.01
RNU6-40P-201ENST00000384254 TRIP4Q15650 581 aaPredicted RBP8.76□□□□□ -1.01
RNU6-40P-201ENST00000384254 TMC4Q7Z404 712 aa8.76□□□□□ -1.01
RNU6-40P-201ENST00000384254 FRMD6Q96NE9 622 aa8.76□□□□□ -1.01
RNU6-40P-201ENST00000384254 KCNH4Q9UQ05 1017 aa8.76□□□□□ -1.01
RNU6-40P-201ENST00000384254 KCNMB2Q9Y691 235 aa8.76□□□□□ -1.01
RNU6-40P-201ENST00000384254 KHNYNO15037 678 aaKnown RBP8.75□□□□□ -1.01
RNU6-40P-201ENST00000384254 FAM157BP0CG42 384 aa8.75□□□□□ -1.01
RNU6-40P-201ENST00000384254 TTC39BQ5VTQ0 682 aaPredicted RBP8.75□□□□□ -1.01
RNU6-40P-201ENST00000384254 NLRP13Q86W25 1043 aa8.75□□□□□ -1.01
RNU6-40P-201ENST00000384254 ZCCHC2Q9C0B9 1178 aaKnown RBP8.75□□□□□ -1.01
RNU6-40P-201ENST00000384254 NLRP2Q9NX02 1062 aa8.75□□□□□ -1.01
RNU6-40P-201ENST00000384254 FOXD3Q9UJU5 478 aaPredicted RBP8.75□□□□□ -1.01
RNU6-40P-201ENST00000384254 PCDHGC4Q9Y5F7 938 aa8.75□□□□□ -1.01
RNU6-40P-201ENST00000384254 SENP3-EIF4A1A0A087X0R7 540 aa8.74□□□□□ -1.01
RNU6-40P-201ENST00000384254 SOBPA7XYQ1 873 aa8.74□□□□□ -1.01
RNU6-40P-201ENST00000384254 GNA15P30679 374 aa8.74□□□□□ -1.01
RNU6-40P-201ENST00000384254 DAB2P98082 770 aa8.74□□□□□ -1.01
RNU6-40P-201ENST00000384254 PMEPA1Q969W9 287 aa8.74□□□□□ -1.01
RNU6-40P-201ENST00000384254 FAM161BQ96MY7 647 aa8.74□□□□□ -1.01
RNU6-40P-201ENST00000384254 PNMA5Q96PV4 448 aa8.74□□□□□ -1.01
RNU6-40P-201ENST00000384254 DCDC2BA2VCK2 349 aa8.73□□□□□ -1.01
RNU6-40P-201ENST00000384254 RECKO95980 971 aa8.73□□□□□ -1.01
RNU6-40P-201ENST00000384254 EGFRP00533 1210 aa8.73□□□□□ -1.01
RNU6-40P-201ENST00000384254 MRPL58Q14197 206 aaKnown RBP8.73□□□□□ -1.01
RNU6-40P-201ENST00000384254 SETDB2Q96T68 719 aa8.73□□□□□ -1.01
RNU6-40P-201ENST00000384254 ABI2Q9NYB9 513 aaPredicted RBP8.73□□□□□ -1.01
RNU6-40P-201ENST00000384254 TMEM63CQ9P1W3 806 aa8.73□□□□□ -1.01
RNU6-40P-201ENST00000384254 SLC35F4A4IF30 521 aa8.72□□□□□ -1.01
RNU6-40P-201ENST00000384254 KCNQ4P56696 695 aa8.72□□□□□ -1.01
RNU6-40P-201ENST00000384254 LAMC2Q13753 1193 aa8.72□□□□□ -1.01
RNU6-40P-201ENST00000384254 CCINQ13939 588 aa8.72□□□□□ -1.01
RNU6-40P-201ENST00000384254 CCDC155Q8N6L0 562 aa8.72□□□□□ -1.01
RNU6-40P-201ENST00000384254 GMCL1Q96IK5 515 aa8.72□□□□□ -1.01
RNU6-40P-201ENST00000384254 IRX2Q9BZI1 471 aaPredicted RBP8.72□□□□□ -1.01
RNU6-40P-201ENST00000384254 ZFYVE28Q9HCC9 887 aa8.72□□□□□ -1.01
RNU6-40P-201ENST00000384254 SCAMP3O14828 347 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms