RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 PLEKHG3A1L390 1219 aa16.2■□□□□ 0.18
SNPH-201ENST00000381867 SSBP05455 408 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNPH-201ENST00000381867 IFIT5Q13325 482 aaKnown RBP16.2■□□□□ 0.18
SNPH-201ENST00000381867 PRPF40BQ6NWY9 871 aaKnown RBP16.2■□□□□ 0.18
SNPH-201ENST00000381867 UVSSAQ2YD98 709 aa16.2■□□□□ 0.18
SNPH-201ENST00000381867 EXOC6BQ9Y2D4 811 aa16.2■□□□□ 0.18
SNPH-201ENST00000381867 TDO2P48775 406 aa16.19■□□□□ 0.18
SNPH-201ENST00000381867 METTL24Q5JXM2 366 aa16.19■□□□□ 0.18
SNPH-201ENST00000381867 PPP1R42Q7Z4L9 355 aa16.19■□□□□ 0.18
SNPH-201ENST00000381867 CCDC91Q7Z6B0 441 aa16.19■□□□□ 0.18
SNPH-201ENST00000381867 INSRP06213 1382 aa16.19■□□□□ 0.18
SNPH-201ENST00000381867 ADCY5O95622 1261 aa16.19■□□□□ 0.18
SNPH-201ENST00000381867 ZHX1Q9UKY1 873 aaPredicted RBP16.19■□□□□ 0.18
SNPH-201ENST00000381867 MAP3K5Q99683 1374 aa16.19■□□□□ 0.18
SNPH-201ENST00000381867 TRMT1Q9NXH9 659 aaKnown RBP16.19■□□□□ 0.18
SNPH-201ENST00000381867 TMOD2Q9NZR1 351 aa16.19■□□□□ 0.18
SNPH-201ENST00000381867 PTPRTO14522 1441 aa16.19■□□□□ 0.18
SNPH-201ENST00000381867 TRERF1Q96PN7 1200 aa16.19■□□□□ 0.18
SNPH-201ENST00000381867 ARHGAP31Q2M1Z3 1444 aa16.19■□□□□ 0.18
SNPH-201ENST00000381867 ERVK-7P63135 1459 aa16.19■□□□□ 0.18
SNPH-201ENST00000381867 BMS1Q14692 1282 aaKnown RBP16.18■□□□□ 0.18
SNPH-201ENST00000381867 FKBP15Q5T1M5 1219 aa16.18■□□□□ 0.18
SNPH-201ENST00000381867 CWC25Q9NXE8 425 aaPredicted RBP16.18■□□□□ 0.18
SNPH-201ENST00000381867 TET3O43151 1660 aa16.18■□□□□ 0.18
SNPH-201ENST00000381867 PCDH11XQ9BZA7 1347 aa16.18■□□□□ 0.18
SNPH-201ENST00000381867 PCDH11YQ9BZA8 1340 aa16.18■□□□□ 0.18
SNPH-201ENST00000381867 ANKRD18BA2A2Z9 1011 aa16.18■□□□□ 0.18
SNPH-201ENST00000381867 CAVIN4Q5BKX8 364 aa16.18■□□□□ 0.18
SNPH-201ENST00000381867 LRP2BPQ9P2M1 347 aa16.18■□□□□ 0.18
SNPH-201ENST00000381867 C20orf194Q5TEA3 1177 aa16.18■□□□□ 0.18
SNPH-201ENST00000381867 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.18■□□□□ 0.18
SNPH-201ENST00000381867 TRMT112Q9UI30 125 aaKnown RBP16.18■□□□□ 0.18
SNPH-201ENST00000381867 DDB1Q16531 1140 aa16.18■□□□□ 0.18
SNPH-201ENST00000381867 LUZP1Q86V48 1076 aa16.18■□□□□ 0.18
SNPH-201ENST00000381867 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
SNPH-201ENST00000381867 HOXC9P31274 260 aa16.17■□□□□ 0.18
SNPH-201ENST00000381867 RNF187Q5TA31 235 aaPredicted RBP16.17■□□□□ 0.18
SNPH-201ENST00000381867 DCAF5Q96JK2 942 aa16.17■□□□□ 0.18
SNPH-201ENST00000381867 LIMCH1Q9UPQ0 1083 aa16.17■□□□□ 0.18
SNPH-201ENST00000381867 GOLGA6L9A6NEM1 432 aa16.17■□□□□ 0.18
SNPH-201ENST00000381867 KLHL40Q2TBA0 621 aa16.17■□□□□ 0.18
SNPH-201ENST00000381867 CKAP2LQ8IYA6 745 aa16.17■□□□□ 0.18
SNPH-201ENST00000381867 SPINK5Q9NQ38 1064 aaPredicted RBP16.17■□□□□ 0.18
SNPH-201ENST00000381867 UGGT1Q9NYU2 1555 aa16.17■□□□□ 0.18
SNPH-201ENST00000381867 PAFAH1B1P43034 410 aa16.17■□□□□ 0.18
SNPH-201ENST00000381867 PAXBP1Q9Y5B6 917 aa16.17■□□□□ 0.18
SNPH-201ENST00000381867 ALDH1L1O75891 902 aa16.17■□□□□ 0.18
SNPH-201ENST00000381867 SKAP1Q86WV1 359 aa16.17■□□□□ 0.18
SNPH-201ENST00000381867 CCDC113Q9H0I3 377 aa16.17■□□□□ 0.18
SNPH-201ENST00000381867 SLC5A1P13866 664 aa16.16■□□□□ 0.18
SNPH-201ENST00000381867 IFFO1Q0D2I5 559 aa16.16■□□□□ 0.18
SNPH-201ENST00000381867 CDC5LQ99459 802 aaKnown RBP16.16■□□□□ 0.18
SNPH-201ENST00000381867 ERCC6L2Q5T890 1561 aa16.16■□□□□ 0.18
SNPH-201ENST00000381867 MPHOSPH10O00566 681 aaKnown RBP16.16■□□□□ 0.18
SNPH-201ENST00000381867 CLCN1P35523 988 aa16.16■□□□□ 0.18
SNPH-201ENST00000381867 STX1AQ16623 288 aa16.16■□□□□ 0.18
SNPH-201ENST00000381867 ZNF287Q9HBT7 754 aa16.16■□□□□ 0.18
SNPH-201ENST00000381867 KDM5AP29375 1690 aaKnown RBP16.16■□□□□ 0.18
SNPH-201ENST00000381867 GOLGA6L10A0A0M3HER8 536 aa16.16■□□□□ 0.18
SNPH-201ENST00000381867 SNW1Q13573 536 aaKnown RBP16.16■□□□□ 0.18
SNPH-201ENST00000381867 BAG4O95429 457 aaKnown RBP16.16■□□□□ 0.18
SNPH-201ENST00000381867 SMC1AQ14683 1233 aaKnown RBP16.16■□□□□ 0.18
SNPH-201ENST00000381867 ZMYND15Q9H091 742 aa16.16■□□□□ 0.18
SNPH-201ENST00000381867 USO1O60763 962 aaKnown RBP16.15■□□□□ 0.18
SNPH-201ENST00000381867 KLHL10Q6JEL2 608 aa16.15■□□□□ 0.18
SNPH-201ENST00000381867 SMARCA5O60264 1052 aaPredicted RBP16.15■□□□□ 0.18
SNPH-201ENST00000381867 IBSPP21815 317 aaPredicted RBP16.15■□□□□ 0.18
SNPH-201ENST00000381867 CETN2P41208 172 aa16.15■□□□□ 0.18
SNPH-201ENST00000381867 SPDYE4A6NLX3 237 aa16.15■□□□□ 0.18
SNPH-201ENST00000381867 C8orf76Q96K31 380 aa16.15■□□□□ 0.18
SNPH-201ENST00000381867 YEATS4O95619 227 aa16.15■□□□□ 0.18
SNPH-201ENST00000381867 SLF2Q8IX21 1173 aa16.15■□□□□ 0.18
SNPH-201ENST00000381867 TIGD1Q96MW7 591 aa16.14■□□□□ 0.18
SNPH-201ENST00000381867 CARD14Q9BXL6 1004 aa16.14■□□□□ 0.18
SNPH-201ENST00000381867 NPHP4O75161 1426 aaPredicted RBP16.14■□□□□ 0.18
SNPH-201ENST00000381867 KIF1BO60333 1816 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 CDC42BPAQ5VT25 1732 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 CEP135Q66GS9 1140 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 TMC6Q7Z403 805 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 ABCC3O15438 1527 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 GCOM1H8Y6P7 765 aaPredicted RBP16.14■□□□□ 0.17
SNPH-201ENST00000381867 PPP1R12BO60237 982 aaPredicted RBP16.14■□□□□ 0.17
SNPH-201ENST00000381867 HMGB1P09429 215 aaKnown RBP16.14■□□□□ 0.17
SNPH-201ENST00000381867 MYZAPP0CAP1 466 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 TRIM27P14373 513 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 PHAXQ9H814 394 aaKnown RBP16.14■□□□□ 0.17
SNPH-201ENST00000381867 ABCF2Q9UG63 623 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 MAP3K19Q56UN5 1328 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 IDH1O75874 414 aaKnown RBP16.14■□□□□ 0.17
SNPH-201ENST00000381867 CACNA2D4Q7Z3S7 1137 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 TICAM2Q86XR7 235 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 MAP3K2Q9Y2U5 619 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 KDM5CP41229 1560 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 CAVIN2O95810 425 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 LMAN1P49257 510 aa16.14■□□□□ 0.17
SNPH-201ENST00000381867 RPGRQ92834 1020 aaKnown RBP16.14■□□□□ 0.17
SNPH-201ENST00000381867 TSPOAP1O95153 1857 aa16.13■□□□□ 0.17
SNPH-201ENST00000381867 DESP17661 470 aa16.13■□□□□ 0.17
SNPH-201ENST00000381867 CTR9Q6PD62 1173 aa16.13■□□□□ 0.17
SNPH-201ENST00000381867 VPS36Q86VN1 386 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms