RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SAFBQ15424 915 aaKnown RBP eCLIP5.64□□□□□ -1.51
PTPRD-203ENST00000381196 ZNF530Q6P9A1 599 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-203ENST00000381196 CCAR2Q8N163 923 aaKnown RBP5.64□□□□□ -1.51
PTPRD-203ENST00000381196 CRACR2AQ9BSW2 395 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 TRIM5Q9C035 493 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 NOL8Q76FK4 1167 aaKnown RBP5.64□□□□□ -1.51
PTPRD-203ENST00000381196 GEMIN8Q9NWZ8 242 aaKnown RBP5.64□□□□□ -1.51
PTPRD-203ENST00000381196 POLD1P28340 1107 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 MNAT1P51948 309 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 ZBTB17Q13105 803 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 PANK3Q9H999 370 aa5.64□□□□□ -1.51
PTPRD-203ENST00000381196 FGFR1OPO95684 399 aaKnown RBP5.63□□□□□ -1.51
PTPRD-203ENST00000381196 ARID4AP29374 1257 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-203ENST00000381196 GOLGA5Q8TBA6 731 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 NAP1L3Q99457 506 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-203ENST00000381196 MAP3K5Q99683 1374 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 IFT172Q9UG01 1749 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 SEPT2Q15019 361 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 CEP131Q9UPN4 1083 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 FANCAO15360 1455 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 RTL1A6NKG5 1358 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 KLHL10Q6JEL2 608 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 EXOC6Q8TAG9 804 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 BRD3Q15059 726 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 BICDL1Q6ZP65 573 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 CCHCR1Q8TD31 782 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 CALR3Q96L12 384 aaKnown RBP5.63□□□□□ -1.51
PTPRD-203ENST00000381196 IFT74Q96LB3 600 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 CABP2Q9NPB3 220 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 CWC25Q9NXE8 425 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-203ENST00000381196 MYOM1P52179 1685 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 INO80Q9ULG1 1556 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-203ENST00000381196 PRPHP41219 470 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 SEMA3FQ13275 785 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 DRP2Q13474 957 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 TSGA10Q9BZW7 698 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 CEP83Q9Y592 693 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 KIF5CO60282 957 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 NBPF11Q86T75 865 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 RMDN2Q96LZ7 410 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 CD109Q6YHK3 1445 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 XPCQ01831 940 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-203ENST00000381196 NBPF9Q3BBW0 867 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 RILPL2Q969X0 211 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 ARHGEF10O15013 1369 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 PPP4R3BQ5MIZ7 849 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 RNF168Q8IYW5 571 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-203ENST00000381196 NUP62CLQ9H1M0 184 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 MYO1AQ9UBC5 1043 aa5.63□□□□□ -1.51
PTPRD-203ENST00000381196 GCOM1H8Y6P7 765 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-203ENST00000381196 MYZAPP0CAP1 466 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 CACNA2D4Q7Z3S7 1137 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 ZCCHC11Q5TAX3 1644 aaKnown RBP5.62□□□□□ -1.51
PTPRD-203ENST00000381196 PSMD7P51665 324 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 CCDC40Q4G0X9 1142 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 RALYLQ86SE5 291 aaKnown RBP5.62□□□□□ -1.51
PTPRD-203ENST00000381196 EFCAB13Q8IY85 973 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 EFCAB6Q5THR3 1501 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 HSPA4P34932 840 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 TDO2P48775 406 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 TMED1Q13445 227 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 IFI16Q16666 785 aaKnown RBP5.62□□□□□ -1.51
PTPRD-203ENST00000381196 ZNF652Q9Y2D9 606 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 GON4LQ3T8J9 2241 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 ATP2B2Q01814 1243 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 SART3Q15020 963 aaKnown RBP5.62□□□□□ -1.51
PTPRD-203ENST00000381196 HDXQ7Z353 690 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 TSKSQ9UJT2 592 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 MRVI1Q9Y6F6 885 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 SMC1AQ14683 1233 aaKnown RBP5.62□□□□□ -1.51
PTPRD-203ENST00000381196 PDCD2Q16342 344 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-203ENST00000381196 LZICQ8WZA0 190 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 FAM210AQ96ND0 272 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 MPHOSPH8Q99549 860 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 SLU7O95391 586 aaKnown RBP5.62□□□□□ -1.51
PTPRD-203ENST00000381196 TMEM87AQ8NBN3 555 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 ALS2CR12Q96Q35 445 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 TNMDQ9H2S6 317 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 CNNM1Q9NRU3 951 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 ATP6V1AP38606 617 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 RIPK4P57078 832 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 FAM114A2Q9NRY5 505 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 MTMR7Q9Y216 660 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 A2MP01023 1474 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 RBBP5Q15291 538 aaKnown RBP5.62□□□□□ -1.51
PTPRD-203ENST00000381196 MCTP1Q6DN14 999 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 TEX2Q8IWB9 1127 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 THEGQ9P2T0 379 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 NEXMIFQ5QGS0 1516 aa5.62□□□□□ -1.51
PTPRD-203ENST00000381196 PLCD3Q8N3E9 789 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 KIF4BQ2VIQ3 1234 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 NPHP3Q7Z494 1330 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 AMOTQ4VCS5 1084 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.61□□□□□ -1.51
PTPRD-203ENST00000381196 TAOK3Q9H2K8 898 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 SPDYE4A6NLX3 237 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 EBAG9O00559 213 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 ZKSCAN8Q15776 578 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-203ENST00000381196 TMEM132EQ6IEE7 984 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 VCX3BQ9H321 246 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms