RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 IBTKQ9P2D0 1353 aaPredicted RBP9.92□□□□□ -0.82
ERCC8-202ENST00000381118 FAM177BA6PVY3 158 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 H7C1W4 665 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 GNPATO15228 680 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 CASP7P55210 303 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 OS9Q13438 667 aaPredicted RBP9.91□□□□□ -0.82
ERCC8-202ENST00000381118 MTX1Q13505 466 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 HSP90AB3PQ58FF7 597 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 SIL1Q9H173 461 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 IL1RAPL2Q9NP60 686 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 BCORQ6W2J9 1755 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 C4BP0C0L5 1744 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 MYH3P11055 1940 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 ERVV-1B6SEH8 477 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 FAM161AQ3B820 660 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 C8orf34Q49A92 452 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 SYNE4Q8N205 404 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 BACH2Q9BYV9 841 aa9.91□□□□□ -0.82
ERCC8-202ENST00000381118 UBN2Q6ZU65 1347 aa9.9□□□□□ -0.82
ERCC8-202ENST00000381118 CNTNAP4Q9C0A0 1308 aa9.9□□□□□ -0.82
ERCC8-202ENST00000381118 PHF14O94880 888 aa9.9□□□□□ -0.82
ERCC8-202ENST00000381118 LMBR1LQ6UX01 489 aa9.9□□□□□ -0.82
ERCC8-202ENST00000381118 NLRP10Q86W26 655 aa9.9□□□□□ -0.82
ERCC8-202ENST00000381118 LRRC4BQ9NT99 713 aa9.9□□□□□ -0.82
ERCC8-202ENST00000381118 CAMTA2O94983 1202 aa9.9□□□□□ -0.83
ERCC8-202ENST00000381118 AMIGO3Q86WK7 504 aa9.9□□□□□ -0.83
ERCC8-202ENST00000381118 CCDC85AQ96PX6 553 aaPredicted RBP9.9□□□□□ -0.83
ERCC8-202ENST00000381118 FOXO4P98177 505 aa9.89□□□□□ -0.83
ERCC8-202ENST00000381118 PLEKHM2Q8IWE5 1019 aa9.89□□□□□ -0.83
ERCC8-202ENST00000381118 ZBTB38Q8NAP3 1195 aaPredicted RBP9.89□□□□□ -0.83
ERCC8-202ENST00000381118 TRMT112Q9UI30 125 aaKnown RBP9.89□□□□□ -0.83
ERCC8-202ENST00000381118 C4AP0C0L4 1744 aa9.89□□□□□ -0.83
ERCC8-202ENST00000381118 TRIM28Q13263 835 aaKnown RBP9.88□□□□□ -0.83
ERCC8-202ENST00000381118 RABL6Q3YEC7 729 aaPredicted RBP9.88□□□□□ -0.83
ERCC8-202ENST00000381118 TSHZ3Q63HK5 1081 aa9.88□□□□□ -0.83
ERCC8-202ENST00000381118 RHPN1Q8TCX5 695 aa9.88□□□□□ -0.83
ERCC8-202ENST00000381118 AK7Q96M32 723 aa9.88□□□□□ -0.83
ERCC8-202ENST00000381118 NIP7Q9Y221 180 aaKnown RBP eCLIP9.88□□□□□ -0.83
ERCC8-202ENST00000381118 RTCBQ9Y3I0 505 aaKnown RBP9.88□□□□□ -0.83
ERCC8-202ENST00000381118 SCN7AQ01118 1682 aa9.88□□□□□ -0.83
ERCC8-202ENST00000381118 RAB11FIP3O75154 756 aa9.88□□□□□ -0.83
ERCC8-202ENST00000381118 RPS6KA4O75676 772 aa9.88□□□□□ -0.83
ERCC8-202ENST00000381118 PCCAP05165 728 aaPredicted RBP9.88□□□□□ -0.83
ERCC8-202ENST00000381118 BICDL1Q6ZP65 573 aa9.88□□□□□ -0.83
ERCC8-202ENST00000381118 NUTM1Q86Y26 1132 aa9.88□□□□□ -0.83
ERCC8-202ENST00000381118 ZNF34Q8IZ26 560 aa9.88□□□□□ -0.83
ERCC8-202ENST00000381118 KIF1BPQ96EK5 621 aa9.88□□□□□ -0.83
ERCC8-202ENST00000381118 SRP68Q9UHB9 627 aaKnown RBP9.88□□□□□ -0.83
ERCC8-202ENST00000381118 UBR3Q6ZT12 1888 aa9.87□□□□□ -0.83
ERCC8-202ENST00000381118 APBA3O96018 575 aa9.87□□□□□ -0.83
ERCC8-202ENST00000381118 G3BP1Q13283 466 aaKnown RBP eCLIP9.87□□□□□ -0.83
ERCC8-202ENST00000381118 HSP90AB4PQ58FF6 505 aa9.87□□□□□ -0.83
ERCC8-202ENST00000381118 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
ERCC8-202ENST00000381118 SUSD4Q5VX71 490 aa9.87□□□□□ -0.83
ERCC8-202ENST00000381118 USPL1Q5W0Q7 1092 aa9.87□□□□□ -0.83
ERCC8-202ENST00000381118 ZNF652Q9Y2D9 606 aa9.87□□□□□ -0.83
ERCC8-202ENST00000381118 NOP58Q9Y2X3 529 aaKnown RBP9.87□□□□□ -0.83
ERCC8-202ENST00000381118 PTPN12Q05209 780 aaKnown RBP9.87□□□□□ -0.83
ERCC8-202ENST00000381118 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.87□□□□□ -0.83
ERCC8-202ENST00000381118 IRS4O14654 1257 aaPredicted RBP9.86□□□□□ -0.83
ERCC8-202ENST00000381118 ZPR1O75312 459 aa9.86□□□□□ -0.83
ERCC8-202ENST00000381118 GSPT1P15170 499 aaKnown RBP9.86□□□□□ -0.83
ERCC8-202ENST00000381118 RFX5P48382 616 aaPredicted RBP9.86□□□□□ -0.83
ERCC8-202ENST00000381118 TXNRD1Q16881 649 aa9.86□□□□□ -0.83
ERCC8-202ENST00000381118 ARHGEF1Q92888 912 aaKnown RBP9.86□□□□□ -0.83
ERCC8-202ENST00000381118 ZNF594Q96JF6 807 aaPredicted RBP9.86□□□□□ -0.83
ERCC8-202ENST00000381118 CASZ1Q86V15 1759 aa9.86□□□□□ -0.83
ERCC8-202ENST00000381118 SASH1O94885 1247 aa9.86□□□□□ -0.83
ERCC8-202ENST00000381118 MX1P20591 662 aa9.86□□□□□ -0.83
ERCC8-202ENST00000381118 PDE1AP54750 535 aa9.86□□□□□ -0.83
ERCC8-202ENST00000381118 BMP2KLQ5H9B9 411 aa9.86□□□□□ -0.83
ERCC8-202ENST00000381118 SLC27A3Q5K4L6 730 aa9.86□□□□□ -0.83
ERCC8-202ENST00000381118 NARFQ9UHQ1 456 aa9.86□□□□□ -0.83
ERCC8-202ENST00000381118 DDX60Q8IY21 1712 aaKnown RBP9.86□□□□□ -0.83
ERCC8-202ENST00000381118 TNS1Q9HBL0 1735 aaKnown RBP9.86□□□□□ -0.83
ERCC8-202ENST00000381118 CDHR2Q9BYE9 1310 aa9.85□□□□□ -0.83
ERCC8-202ENST00000381118 AK9Q5TCS8 1911 aa9.85□□□□□ -0.83
ERCC8-202ENST00000381118 SEC24BO95487 1268 aa9.85□□□□□ -0.83
ERCC8-202ENST00000381118 HCLS1P14317 486 aaPredicted RBP9.85□□□□□ -0.83
ERCC8-202ENST00000381118 RFC4P35249 363 aa9.85□□□□□ -0.83
ERCC8-202ENST00000381118 CCDC57Q2TAC2 916 aa9.85□□□□□ -0.83
ERCC8-202ENST00000381118 TRAPPC3LQ5T215 181 aa9.85□□□□□ -0.83
ERCC8-202ENST00000381118 TTC22Q5TAA0 569 aa9.85□□□□□ -0.83
ERCC8-202ENST00000381118 TBC1D9BQ66K14 1250 aa9.85□□□□□ -0.83
ERCC8-202ENST00000381118 ERC1Q8IUD2 1116 aa9.85□□□□□ -0.83
ERCC8-202ENST00000381118 PROM2Q8N271 834 aa9.85□□□□□ -0.83
ERCC8-202ENST00000381118 CLASRPQ8N2M8 674 aaKnown RBP9.85□□□□□ -0.83
ERCC8-202ENST00000381118 UTP14AQ9BVJ6 771 aaKnown RBP9.85□□□□□ -0.83
ERCC8-202ENST00000381118 COPRSQ9NQ92 184 aa9.85□□□□□ -0.83
ERCC8-202ENST00000381118 PARP10Q53GL7 1025 aa9.84□□□□□ -0.83
ERCC8-202ENST00000381118 CLEC4GQ6UXB4 293 aa9.84□□□□□ -0.83
ERCC8-202ENST00000381118 BCL2L12Q9HB09 334 aa9.84□□□□□ -0.83
ERCC8-202ENST00000381118 TUBGCP6Q96RT7 1819 aa9.84□□□□□ -0.83
ERCC8-202ENST00000381118 SH3TC1Q8TE82 1336 aa9.84□□□□□ -0.83
ERCC8-202ENST00000381118 SALL3Q9BXA9 1300 aa9.84□□□□□ -0.83
ERCC8-202ENST00000381118 SPEF2Q9C093 1822 aa9.84□□□□□ -0.83
ERCC8-202ENST00000381118 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.84□□□□□ -0.83
ERCC8-202ENST00000381118 PDE8AO60658 829 aa9.84□□□□□ -0.83
ERCC8-202ENST00000381118 CTSWP56202 376 aa9.84□□□□□ -0.83
ERCC8-202ENST00000381118 AACSQ86V21 672 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms