RNA–Protein interactions for RNA: ENST00000380725.1

CDKN1C-201, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDKN1C, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-201ENST00000380725 PLBD2Q8NHP8 589 aa23.04■■□□□ 1.28
CDKN1C-201ENST00000380725 SALL2Q9Y467 1007 aaPredicted RBP23.04■■□□□ 1.28
CDKN1C-201ENST00000380725 ANKRD36CQ5JPF3 1778 aa23.04■■□□□ 1.28
CDKN1C-201ENST00000380725 TSR2Q969E8 191 aaKnown RBP23.03■■□□□ 1.28
CDKN1C-201ENST00000380725 CHMP4AQ9BY43 222 aa23.03■■□□□ 1.28
CDKN1C-201ENST00000380725 CRY2Q49AN0 593 aa23.02■■□□□ 1.28
CDKN1C-201ENST00000380725 SLC10A5Q5PT55 438 aa23.02■■□□□ 1.28
CDKN1C-201ENST00000380725 NLRP10Q86W26 655 aa23.02■■□□□ 1.28
CDKN1C-201ENST00000380725 C7orf43Q8WVR3 580 aa23.02■■□□□ 1.28
CDKN1C-201ENST00000380725 TNRC6CQ9HCJ0 1690 aaKnown RBP23.01■■□□□ 1.27
CDKN1C-201ENST00000380725 TSPYL6Q8N831 410 aa23.01■■□□□ 1.27
CDKN1C-201ENST00000380725 RPGRQ92834 1020 aaKnown RBP23.01■■□□□ 1.27
CDKN1C-201ENST00000380725 KIF3CO14782 793 aa23■■□□□ 1.27
CDKN1C-201ENST00000380725 CCDC30Q5VVM6 783 aa23■■□□□ 1.27
CDKN1C-201ENST00000380725 NLRP3Q96P20 1036 aa23■■□□□ 1.27
CDKN1C-201ENST00000380725 TAOK3Q9H2K8 898 aa23■■□□□ 1.27
CDKN1C-201ENST00000380725 PHAXQ9H814 394 aaKnown RBP23■■□□□ 1.27
CDKN1C-201ENST00000380725 IL16Q14005 1332 aa23■■□□□ 1.27
CDKN1C-201ENST00000380725 KDM2BQ8NHM5 1336 aa23■■□□□ 1.27
CDKN1C-201ENST00000380725 HOXA10P31260 410 aaPredicted RBP22.99■■□□□ 1.27
CDKN1C-201ENST00000380725 NMRK2Q9NPI5 230 aa22.99■■□□□ 1.27
CDKN1C-201ENST00000380725 TRMT112Q9UI30 125 aaKnown RBP22.99■■□□□ 1.27
CDKN1C-201ENST00000380725 DICER1Q9UPY3 1922 aaKnown RBP22.99■■□□□ 1.27
CDKN1C-201ENST00000380725 ZC3H4Q9UPT8 1303 aaKnown RBP22.99■■□□□ 1.27
CDKN1C-201ENST00000380725 RIC1Q4ADV7 1423 aa22.99■■□□□ 1.27
CDKN1C-201ENST00000380725 CCDC93Q567U6 631 aa22.98■■□□□ 1.27
CDKN1C-201ENST00000380725 WDR63Q8IWG1 891 aa22.98■■□□□ 1.27
CDKN1C-201ENST00000380725 RBM17Q96I25 401 aaKnown RBP22.98■■□□□ 1.27
CDKN1C-201ENST00000380725 RNF123Q5XPI4 1314 aa22.98■■□□□ 1.27
CDKN1C-201ENST00000380725 LTBP3Q9NS15 1303 aa22.98■■□□□ 1.27
CDKN1C-201ENST00000380725 ATP5J2-PTCD1G3V325 749 aa22.97■■□□□ 1.27
CDKN1C-201ENST00000380725 C3orf67Q6ZVT6 689 aa22.97■■□□□ 1.27
CDKN1C-201ENST00000380725 RIC3Q7Z5B4 369 aa22.97■■□□□ 1.27
CDKN1C-201ENST00000380725 SYNE4Q8N205 404 aa22.97■■□□□ 1.27
CDKN1C-201ENST00000380725 ISCA1Q9BUE6 129 aa22.97■■□□□ 1.27
CDKN1C-201ENST00000380725 GOLGA2Q08379 1002 aa22.96■■□□□ 1.27
CDKN1C-201ENST00000380725 OLFM4Q6UX06 510 aa22.96■■□□□ 1.27
CDKN1C-201ENST00000380725 RTKN2Q8IZC4 609 aa22.96■■□□□ 1.27
CDKN1C-201ENST00000380725 ZNF428Q96B54 188 aa22.96■■□□□ 1.27
CDKN1C-201ENST00000380725 CRAMP1Q96RY5 1269 aa22.96■■□□□ 1.27
CDKN1C-201ENST00000380725 HCLS1P14317 486 aaPredicted RBP22.95■■□□□ 1.26
CDKN1C-201ENST00000380725 TWISTNBQ3B726 338 aaPredicted RBP22.95■■□□□ 1.26
CDKN1C-201ENST00000380725 SH3TC1Q8TE82 1336 aa22.95■■□□□ 1.26
CDKN1C-201ENST00000380725 RRAGCQ9HB90 399 aa22.95■■□□□ 1.26
CDKN1C-201ENST00000380725 GLTPD2A6NH11 291 aa22.94■■□□□ 1.26
CDKN1C-201ENST00000380725 TCERG1O14776 1098 aaKnown RBP22.93■■□□□ 1.26
CDKN1C-201ENST00000380725 FKBP4Q02790 459 aaKnown RBP eCLIP22.93■■□□□ 1.26
CDKN1C-201ENST00000380725 TRIM28Q13263 835 aaKnown RBP22.93■■□□□ 1.26
CDKN1C-201ENST00000380725 DPY19L2Q6NUT2 758 aa22.93■■□□□ 1.26
CDKN1C-201ENST00000380725 STK31Q9BXU1 1019 aa22.93■■□□□ 1.26
CDKN1C-201ENST00000380725 TIAM2Q8IVF5 1701 aa22.93■■□□□ 1.26
CDKN1C-201ENST00000380725 CC2D2BQ6DHV5 1058 aa22.92■■□□□ 1.26
CDKN1C-201ENST00000380725 LAMB2P55268 1798 aa22.91■■□□□ 1.26
CDKN1C-201ENST00000380725 TOMM70O94826 608 aa22.91■■□□□ 1.26
CDKN1C-201ENST00000380725 DDX58O95786 925 aaKnown RBP22.91■■□□□ 1.26
CDKN1C-201ENST00000380725 C16orf71Q8IYS4 520 aaPredicted RBP22.91■■□□□ 1.26
CDKN1C-201ENST00000380725 FAM89AQ96GI7 184 aa22.91■■□□□ 1.26
CDKN1C-201ENST00000380725 FANCIQ9NVI1 1328 aa22.9■■□□□ 1.26
CDKN1C-201ENST00000380725 MYD88Q99836 296 aa22.9■■□□□ 1.26
CDKN1C-201ENST00000380725 ZNF277Q9NRM2 450 aaPredicted RBP22.9■■□□□ 1.26
CDKN1C-201ENST00000380725 PPEF1O14829 653 aaPredicted RBP22.89■■□□□ 1.25
CDKN1C-201ENST00000380725 SLC4A2P04920 1241 aa22.88■■□□□ 1.25
CDKN1C-201ENST00000380725 EXOSC9Q06265 439 aaKnown RBP22.88■■□□□ 1.25
CDKN1C-201ENST00000380725 GRIPAP1Q4V328 841 aa22.88■■□□□ 1.25
CDKN1C-201ENST00000380725 RTL5Q5HYW3 569 aaPredicted RBP22.88■■□□□ 1.25
CDKN1C-201ENST00000380725 DDX46Q7L014 1031 aaKnown RBP22.88■■□□□ 1.25
CDKN1C-201ENST00000380725 METTL22Q9BUU2 404 aaPredicted RBP22.88■■□□□ 1.25
CDKN1C-201ENST00000380725 TMX4Q9H1E5 349 aaPredicted RBP22.88■■□□□ 1.25
CDKN1C-201ENST00000380725 CACNA1FO60840 1977 aa22.88■■□□□ 1.25
CDKN1C-201ENST00000380725 ABCC4O15439 1325 aa22.87■■□□□ 1.25
CDKN1C-201ENST00000380725 VAMP4O75379 141 aa22.87■■□□□ 1.25
CDKN1C-201ENST00000380725 BBOX1O75936 387 aa22.87■■□□□ 1.25
CDKN1C-201ENST00000380725 VEGFAP15692 232 aaPredicted RBP22.87■■□□□ 1.25
CDKN1C-201ENST00000380725 KSR2Q6VAB6 950 aa22.87■■□□□ 1.25
CDKN1C-201ENST00000380725 PSMD1Q99460 953 aa22.87■■□□□ 1.25
CDKN1C-201ENST00000380725 SPINK5Q9NQ38 1064 aaPredicted RBP22.87■■□□□ 1.25
CDKN1C-201ENST00000380725 MAP3K2Q9Y2U5 619 aa22.87■■□□□ 1.25
CDKN1C-201ENST00000380725 TAF1P21675 1872 aa22.87■■□□□ 1.25
CDKN1C-201ENST00000380725 IARSP41252 1262 aaKnown RBP22.86■■□□□ 1.25
CDKN1C-201ENST00000380725 G2E3Q7L622 706 aa22.86■■□□□ 1.25
CDKN1C-201ENST00000380725 CCDC191Q8NCU4 936 aa22.86■■□□□ 1.25
CDKN1C-201ENST00000380725 ATP6V0A2Q9Y487 856 aa22.86■■□□□ 1.25
CDKN1C-201ENST00000380725 DDX60Q8IY21 1712 aaKnown RBP22.85■■□□□ 1.25
CDKN1C-201ENST00000380725 PI4KAP2A4QPH2 592 aa22.85■■□□□ 1.25
CDKN1C-201ENST00000380725 IRS4O14654 1257 aaPredicted RBP22.85■■□□□ 1.25
CDKN1C-201ENST00000380725 PI4KAP1Q8N8J0 262 aa22.85■■□□□ 1.25
CDKN1C-201ENST00000380725 ZBTB38Q8NAP3 1195 aaPredicted RBP22.85■■□□□ 1.25
CDKN1C-201ENST00000380725 RBM46Q8TBY0 533 aaKnown RBP22.85■■□□□ 1.25
CDKN1C-201ENST00000380725 MYH16Q9H6N6 1097 aa22.85■■□□□ 1.25
CDKN1C-201ENST00000380725 DDNO94850 711 aaPredicted RBP22.84■■□□□ 1.25
CDKN1C-201ENST00000380725 SF3B3Q15393 1217 aaKnown RBP22.84■■□□□ 1.25
CDKN1C-201ENST00000380725 SP8Q8IXZ3 490 aa22.84■■□□□ 1.25
CDKN1C-201ENST00000380725 SNED1Q8TER0 1413 aa22.83■■□□□ 1.25
CDKN1C-201ENST00000380725 HSPA6P17066 643 aa22.83■■□□□ 1.25
CDKN1C-201ENST00000380725 GRAPQ13588 217 aa22.83■■□□□ 1.25
CDKN1C-201ENST00000380725 SLC51AQ86UW1 340 aa22.83■■□□□ 1.25
CDKN1C-201ENST00000380725 GRAPLQ8TC17 118 aaPredicted RBP22.83■■□□□ 1.25
CDKN1C-201ENST00000380725 CWC25Q9NXE8 425 aaPredicted RBP22.83■■□□□ 1.25
CDKN1C-201ENST00000380725 POTECB2RU33 542 aa22.82■■□□□ 1.24
CDKN1C-201ENST00000380725 PCCAP05165 728 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms