RNA–Protein interactions for RNA: ENST00000380692.6

MSL3-205, Transcript of MSL complex subunit 3, human

TSL 3

Gene MSL3, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSL3-205	ENST00000380692	UTP14A	Q9BVJ6	771 aa	Known RBP	11.63	□□□□□ -0.55
MSL3-205	ENST00000380692	TRMT112	Q9UI30	125 aa	Known RBP	11.63	□□□□□ -0.55
MSL3-205	ENST00000380692	C4A	P0C0L4	1744 aa		11.63	□□□□□ -0.55
MSL3-205	ENST00000380692	PTPRC	P08575	1304 aa		11.62	□□□□□ -0.55
MSL3-205	ENST00000380692	UBN2	Q6ZU65	1347 aa		11.62	□□□□□ -0.55
MSL3-205	ENST00000380692	ATP10D	Q9P241	1426 aa		11.62	□□□□□ -0.55
MSL3-205	ENST00000380692	IPO8	O15397	1037 aa	Known RBP	11.62	□□□□□ -0.55
MSL3-205	ENST00000380692	BRPF1	P55201	1214 aa	Predicted RBP	11.62	□□□□□ -0.55
MSL3-205	ENST00000380692	ST5	P78524	1137 aa		11.62	□□□□□ -0.55
MSL3-205	ENST00000380692	SLC4A10	Q6U841	1118 aa		11.62	□□□□□ -0.55
MSL3-205	ENST00000380692	NUTM1	Q86Y26	1132 aa		11.62	□□□□□ -0.55
MSL3-205	ENST00000380692	FRAT1	Q92837	279 aa	Predicted RBP	11.62	□□□□□ -0.55
MSL3-205	ENST00000380692	ADCY9	O60503	1353 aa		11.62	□□□□□ -0.55
MSL3-205	ENST00000380692	TGFB2	P61812	414 aa		11.61	□□□□□ -0.55
MSL3-205	ENST00000380692	CHRDL2	Q6WN34	429 aa		11.61	□□□□□ -0.55
MSL3-205	ENST00000380692	CCDC191	Q8NCU4	936 aa		11.61	□□□□□ -0.55
MSL3-205	ENST00000380692	LINS1	Q8NG48	757 aa		11.61	□□□□□ -0.55
MSL3-205	ENST00000380692	BRIP1	Q9BX63	1249 aa		11.61	□□□□□ -0.55
MSL3-205	ENST00000380692	CWC25	Q9NXE8	425 aa	Predicted RBP	11.61	□□□□□ -0.55
MSL3-205	ENST00000380692		A0A0G2JLW4	131 aa		11.6	□□□□□ -0.55
MSL3-205	ENST00000380692	NTSR2	O95665	410 aa		11.6	□□□□□ -0.55
MSL3-205	ENST00000380692	IGKV5-2	P06315	115 aa		11.6	□□□□□ -0.55
MSL3-205	ENST00000380692	PDE6B	P35913	854 aa		11.6	□□□□□ -0.55
MSL3-205	ENST00000380692	CWF19L2	Q2TBE0	894 aa	Known RBP	11.6	□□□□□ -0.55
MSL3-205	ENST00000380692	ERFE	Q4G0M1	354 aa		11.6	□□□□□ -0.55
MSL3-205	ENST00000380692	RTL5	Q5HYW3	569 aa	Predicted RBP	11.6	□□□□□ -0.55
MSL3-205	ENST00000380692	ARHGAP45	Q92619	1136 aa		11.6	□□□□□ -0.55
MSL3-205	ENST00000380692	FAM89A	Q96GI7	184 aa		11.6	□□□□□ -0.55
MSL3-205	ENST00000380692	API5	Q9BZZ5	524 aa	Known RBP	11.6	□□□□□ -0.55
MSL3-205	ENST00000380692	RCAN3	Q9UKA8	241 aa		11.6	□□□□□ -0.55
MSL3-205	ENST00000380692	SH3TC1	Q8TE82	1336 aa		11.6	□□□□□ -0.55
MSL3-205	ENST00000380692	KIF16B	Q96L93	1317 aa		11.6	□□□□□ -0.55
MSL3-205	ENST00000380692	NEURL1B	A8MQ27	555 aa		11.59	□□□□□ -0.55
MSL3-205	ENST00000380692		H0YIN7	160 aa		11.59	□□□□□ -0.55
MSL3-205	ENST00000380692	SLC10A5	Q5PT55	438 aa		11.59	□□□□□ -0.55
MSL3-205	ENST00000380692	BEND3	Q5T5X7	828 aa		11.59	□□□□□ -0.55
MSL3-205	ENST00000380692	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.59	□□□□□ -0.55
MSL3-205	ENST00000380692	NLGN2	Q8NFZ4	835 aa		11.59	□□□□□ -0.55
MSL3-205	ENST00000380692	SRCIN1	Q9C0H9	1055 aa		11.59	□□□□□ -0.55
MSL3-205	ENST00000380692	SCN7A	Q01118	1682 aa		11.59	□□□□□ -0.55
MSL3-205	ENST00000380692	SPDYE2B	A6NHP3	402 aa		11.58	□□□□□ -0.56
MSL3-205	ENST00000380692	SPDYE6	P0CI01	402 aa		11.58	□□□□□ -0.56
MSL3-205	ENST00000380692	DPEP1	P16444	411 aa		11.58	□□□□□ -0.56
MSL3-205	ENST00000380692	GCKR	Q14397	625 aa		11.58	□□□□□ -0.56
MSL3-205	ENST00000380692	SPDYE2	Q495Y8	402 aa		11.58	□□□□□ -0.56
MSL3-205	ENST00000380692	ZKSCAN2	Q63HK3	967 aa		11.58	□□□□□ -0.56
MSL3-205	ENST00000380692	C2CD5	Q86YS7	1000 aa		11.58	□□□□□ -0.56
MSL3-205	ENST00000380692	SYNE4	Q8N205	404 aa		11.58	□□□□□ -0.56
MSL3-205	ENST00000380692	JARID2	Q92833	1246 aa	Predicted RBP	11.58	□□□□□ -0.56
MSL3-205	ENST00000380692	NLRP3	Q96P20	1036 aa		11.58	□□□□□ -0.56
MSL3-205	ENST00000380692	PDZRN3	Q9UPQ7	1066 aa		11.58	□□□□□ -0.56
MSL3-205	ENST00000380692	RNF123	Q5XPI4	1314 aa		11.58	□□□□□ -0.56
MSL3-205	ENST00000380692	LRP5	O75197	1615 aa		11.57	□□□□□ -0.56
MSL3-205	ENST00000380692	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.57	□□□□□ -0.56
MSL3-205	ENST00000380692	ALDH1L1	O75891	902 aa		11.57	□□□□□ -0.56
MSL3-205	ENST00000380692	PCCA	P05165	728 aa	Predicted RBP	11.57	□□□□□ -0.56
MSL3-205	ENST00000380692	HCLS1	P14317	486 aa	Predicted RBP	11.57	□□□□□ -0.56
MSL3-205	ENST00000380692	HSP90B1	P14625	803 aa	Known RBP	11.57	□□□□□ -0.56
MSL3-205	ENST00000380692	CHRNA5	P30532	468 aa		11.57	□□□□□ -0.56
MSL3-205	ENST00000380692	ATF7IP	Q6VMQ6	1270 aa		11.57	□□□□□ -0.56
MSL3-205	ENST00000380692	COL24A1	Q17RW2	1714 aa		11.57	□□□□□ -0.56
MSL3-205	ENST00000380692	BCOR	Q6W2J9	1755 aa		11.56	□□□□□ -0.56
MSL3-205	ENST00000380692		H7C1W4	665 aa		11.56	□□□□□ -0.56
MSL3-205	ENST00000380692	IRS4	O14654	1257 aa	Predicted RBP	11.56	□□□□□ -0.56
MSL3-205	ENST00000380692	CCT4	P50991	539 aa	Known RBP	11.56	□□□□□ -0.56
MSL3-205	ENST00000380692	C10orf71	Q711Q0	1435 aa		11.56	□□□□□ -0.56
MSL3-205	ENST00000380692	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.56	□□□□□ -0.56	2e-6	■■■□□ 18.8
MSL3-205	ENST00000380692	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.56	□□□□□ -0.56
MSL3-205	ENST00000380692	PIM2	Q9P1W9	311 aa		11.56	□□□□□ -0.56
MSL3-205	ENST00000380692	WWC3	Q9ULE0	1092 aa		11.56	□□□□□ -0.56
MSL3-205	ENST00000380692	KLRG2	A4D1S0	409 aa	Predicted RBP	11.55	□□□□□ -0.56
MSL3-205	ENST00000380692	SPDYE4	A6NLX3	237 aa		11.55	□□□□□ -0.56
MSL3-205	ENST00000380692	SRGN	P10124	158 aa		11.55	□□□□□ -0.56
MSL3-205	ENST00000380692	TRIM27	P14373	513 aa		11.55	□□□□□ -0.56
MSL3-205	ENST00000380692	KCNA3	P22001	575 aa		11.55	□□□□□ -0.56
MSL3-205	ENST00000380692	UBE3B	Q7Z3V4	1068 aa		11.55	□□□□□ -0.56
MSL3-205	ENST00000380692	PELP1	Q8IZL8	1130 aa	Known RBP	11.55	□□□□□ -0.56
MSL3-205	ENST00000380692	CLUAP1	Q96AJ1	413 aa		11.55	□□□□□ -0.56
MSL3-205	ENST00000380692	MASTL	Q96GX5	879 aa		11.55	□□□□□ -0.56
MSL3-205	ENST00000380692	NUP98	P52948	1817 aa		11.55	□□□□□ -0.56
MSL3-205	ENST00000380692	ABCC12	Q96J65	1359 aa		11.54	□□□□□ -0.56
MSL3-205	ENST00000380692	PDE8A	O60658	829 aa		11.54	□□□□□ -0.56
MSL3-205	ENST00000380692	NPR1	P16066	1061 aa		11.54	□□□□□ -0.56
MSL3-205	ENST00000380692	GPR162	Q16538	588 aa		11.54	□□□□□ -0.56
MSL3-205	ENST00000380692	FTSJ3	Q8IY81	847 aa	Known RBP	11.54	□□□□□ -0.56
MSL3-205	ENST00000380692	RPGR	Q92834	1020 aa	Known RBP	11.54	□□□□□ -0.56
MSL3-205	ENST00000380692	GRM8	O00222	908 aa		11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	ALDH1B1	P30837	517 aa		11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	CRY2	Q49AN0	593 aa		11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	DALRD3	Q5D0E6	543 aa	Known RBP	11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	INTS3	Q68E01	1043 aa	Known RBP	11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	STYK1	Q6J9G0	422 aa		11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	C3orf67	Q6ZVT6	689 aa		11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	DZIP1L	Q8IYY4	767 aa	Known RBP	11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	TTLL6	Q8N841	843 aa		11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	CNKSR1	Q969H4	720 aa		11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	RBM17	Q96I25	401 aa	Known RBP	11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	TNN	Q9UQP3	1299 aa		11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	BCS1L	Q9Y276	419 aa		11.53	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms