RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 GADD45BO75293 160 aaPredicted RBP24.14■■□□□ 1.45
EBF1-202ENST00000380654 NMIQ13287 307 aaPredicted RBP24.14■■□□□ 1.45
EBF1-202ENST00000380654 ANKRD13DQ6ZTN6 518 aa24.13■■□□□ 1.45
EBF1-202ENST00000380654 TTC5Q8N0Z6 440 aa24.13■■□□□ 1.45
EBF1-202ENST00000380654 CCDC171Q6TFL3 1326 aa24.13■■□□□ 1.45
EBF1-202ENST00000380654 MBD3O95983 291 aa24.13■■□□□ 1.45
EBF1-202ENST00000380654 COL9A3Q14050 684 aaPredicted RBP24.13■■□□□ 1.45
EBF1-202ENST00000380654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.13■■□□□ 1.45
EBF1-202ENST00000380654 SNRPA1P09661 255 aaKnown RBP24.12■■□□□ 1.45
EBF1-202ENST00000380654 NECTIN1Q15223 517 aa24.12■■□□□ 1.45
EBF1-202ENST00000380654 LRSAM1Q6UWE0 723 aa24.12■■□□□ 1.45
EBF1-202ENST00000380654 ANP32BQ92688 251 aaKnown RBP24.12■■□□□ 1.45
EBF1-202ENST00000380654 DCAF5Q96JK2 942 aa24.12■■□□□ 1.45
EBF1-202ENST00000380654 USP48Q86UV5 1035 aa24.11■■□□□ 1.45
EBF1-202ENST00000380654 RBM8AQ9Y5S9 174 aaKnown RBP24.11■■□□□ 1.45
EBF1-202ENST00000380654 A0A0D9SFI3 127 aa24.11■■□□□ 1.45
EBF1-202ENST00000380654 EDC3Q96F86 508 aaKnown RBP24.11■■□□□ 1.45
EBF1-202ENST00000380654 PDRG1Q9NUG6 133 aa24.11■■□□□ 1.45
EBF1-202ENST00000380654 AFDNP55196 1824 aaKnown RBP24.11■■□□□ 1.45
EBF1-202ENST00000380654 ATP5J2-PTCD1G3V325 749 aa24.1■■□□□ 1.45
EBF1-202ENST00000380654 PTCD1O75127 700 aaKnown RBP24.1■■□□□ 1.45
EBF1-202ENST00000380654 CCDC83Q8IWF9 413 aa24.1■■□□□ 1.45
EBF1-202ENST00000380654 SYT1P21579 422 aa24.1■■□□□ 1.45
EBF1-202ENST00000380654 UBE3BQ7Z3V4 1068 aa24.1■■□□□ 1.45
EBF1-202ENST00000380654 ZSWIM6Q9HCJ5 1215 aa24.1■■□□□ 1.45
EBF1-202ENST00000380654 CREB3L3Q68CJ9 461 aa24.09■■□□□ 1.45
EBF1-202ENST00000380654 KCNB2Q92953 911 aa24.09■■□□□ 1.45
EBF1-202ENST00000380654 FMNL2Q96PY5 1086 aa24.09■■□□□ 1.45
EBF1-202ENST00000380654 FSD1Q9BTV5 496 aa24.09■■□□□ 1.45
EBF1-202ENST00000380654 TNS3Q68CZ2 1445 aa24.09■■□□□ 1.45
EBF1-202ENST00000380654 MRC1P22897 1456 aa24.09■■□□□ 1.45
EBF1-202ENST00000380654 SMC3Q9UQE7 1217 aa24.09■■□□□ 1.45
EBF1-202ENST00000380654 CYP46A1Q9Y6A2 500 aa24.09■■□□□ 1.45
EBF1-202ENST00000380654 ZSCAN22P10073 491 aaPredicted RBP24.08■■□□□ 1.45
EBF1-202ENST00000380654 KCNJ4P48050 445 aa24.08■■□□□ 1.45
EBF1-202ENST00000380654 VPS53Q5VIR6 699 aa24.08■■□□□ 1.45
EBF1-202ENST00000380654 CNPY2Q9Y2B0 182 aa24.08■■□□□ 1.45
EBF1-202ENST00000380654 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.08■■□□□ 1.45
EBF1-202ENST00000380654 STX6O43752 255 aa24.07■■□□□ 1.44
EBF1-202ENST00000380654 CABP4P57796 275 aa24.07■■□□□ 1.44
EBF1-202ENST00000380654 TPRNQ4KMQ1 711 aa24.07■■□□□ 1.44
EBF1-202ENST00000380654 MAP4K1Q92918 833 aa24.07■■□□□ 1.44
EBF1-202ENST00000380654 RFX5P48382 616 aaPredicted RBP24.07■■□□□ 1.44
EBF1-202ENST00000380654 TAF6LQ9Y6J9 622 aa24.07■■□□□ 1.44
EBF1-202ENST00000380654 NDUFB9Q9Y6M9 179 aa24.07■■□□□ 1.44
EBF1-202ENST00000380654 PKD1L3Q7Z443 1732 aa24.07■■□□□ 1.44
EBF1-202ENST00000380654 ARFGEF2Q9Y6D5 1785 aa24.07■■□□□ 1.44
EBF1-202ENST00000380654 PTPN12Q05209 780 aaKnown RBP24.06■■□□□ 1.44
EBF1-202ENST00000380654 ST3GAL1Q11201 340 aa24.06■■□□□ 1.44
EBF1-202ENST00000380654 TM6SF1Q9BZW5 370 aa24.06■■□□□ 1.44
EBF1-202ENST00000380654 ZNF589Q86UQ0 364 aaPredicted RBP24.06■■□□□ 1.44
EBF1-202ENST00000380654 RNF214Q8ND24 703 aa24.06■■□□□ 1.44
EBF1-202ENST00000380654 ZKSCAN1P17029 563 aaPredicted RBP24.05■■□□□ 1.44
EBF1-202ENST00000380654 GJB2P29033 226 aa24.05■■□□□ 1.44
EBF1-202ENST00000380654 TFCP2Q12800 502 aa24.05■■□□□ 1.44
EBF1-202ENST00000380654 ME3Q16798 604 aa24.05■■□□□ 1.44
EBF1-202ENST00000380654 DBNLQ9UJU6 430 aaKnown RBP24.05■■□□□ 1.44
EBF1-202ENST00000380654 HIP1O00291 1037 aa24.05■■□□□ 1.44
EBF1-202ENST00000380654 SLC27A2O14975 620 aa24.05■■□□□ 1.44
EBF1-202ENST00000380654 NECAB1Q8N987 351 aa24.05■■□□□ 1.44
EBF1-202ENST00000380654 COPRSQ9NQ92 184 aa24.05■■□□□ 1.44
EBF1-202ENST00000380654 SPATA31A3Q5VYP0 1347 aa24.04■■□□□ 1.44
EBF1-202ENST00000380654 A0A087WZG4 1122 aa24.04■■□□□ 1.44
EBF1-202ENST00000380654 TCEANC2Q96MN5 208 aa24.04■■□□□ 1.44
EBF1-202ENST00000380654 GLI3P10071 1580 aa24.04■■□□□ 1.44
EBF1-202ENST00000380654 DCCP43146 1447 aa24.04■■□□□ 1.44
EBF1-202ENST00000380654 ABCC6O95255 1503 aa24.03■■□□□ 1.44
EBF1-202ENST00000380654 CHGBP05060 677 aa24.03■■□□□ 1.44
EBF1-202ENST00000380654 CADPS2Q86UW7 1296 aa24.03■■□□□ 1.44
EBF1-202ENST00000380654 SNRKQ9NRH2 765 aa24.03■■□□□ 1.44
EBF1-202ENST00000380654 F13A1P00488 732 aa24.02■■□□□ 1.44
EBF1-202ENST00000380654 TNNI3KQ59H18 835 aa24.02■■□□□ 1.44
EBF1-202ENST00000380654 TPCN1Q9ULQ1 816 aa24.02■■□□□ 1.44
EBF1-202ENST00000380654 FPGT-TNNI3KV9GXZ4 949 aa24.02■■□□□ 1.44
EBF1-202ENST00000380654 MED23Q9ULK4 1368 aa24.02■■□□□ 1.44
EBF1-202ENST00000380654 RABL6Q3YEC7 729 aaPredicted RBP24.01■■□□□ 1.43
EBF1-202ENST00000380654 PDLIM2Q96JY6 352 aa24.01■■□□□ 1.43
EBF1-202ENST00000380654 TMEM87AQ8NBN3 555 aa24.01■■□□□ 1.43
EBF1-202ENST00000380654 NAP1L5Q96NT1 182 aaPredicted RBP24.01■■□□□ 1.43
EBF1-202ENST00000380654 NBPF26B4DH59 902 aa24■■□□□ 1.43
EBF1-202ENST00000380654 NBPF14Q5TI25 921 aa24■■□□□ 1.43
EBF1-202ENST00000380654 NBPF10Q6P3W6 841 aaKnown RBP24■■□□□ 1.43
EBF1-202ENST00000380654 NBPF15Q8N660 670 aa24■■□□□ 1.43
EBF1-202ENST00000380654 CASP7P55210 303 aa24■■□□□ 1.43
EBF1-202ENST00000380654 ZSCAN31Q96LW9 406 aaPredicted RBP24■■□□□ 1.43
EBF1-202ENST00000380654 SH2B1Q9NRF2 756 aaPredicted RBP24■■□□□ 1.43
EBF1-202ENST00000380654 MTMR6Q9Y217 621 aa24■■□□□ 1.43
EBF1-202ENST00000380654 FIBPO43427 364 aa23.99■■□□□ 1.43
EBF1-202ENST00000380654 PLBD2Q8NHP8 589 aa23.99■■□□□ 1.43
EBF1-202ENST00000380654 SYAP1Q96A49 352 aaPredicted RBP23.99■■□□□ 1.43
EBF1-202ENST00000380654 DBNDD2Q9BQY9 259 aa23.99■■□□□ 1.43
EBF1-202ENST00000380654 CCDC9Q9Y3X0 531 aaKnown RBP23.99■■□□□ 1.43
EBF1-202ENST00000380654 COL15A1P39059 1388 aa23.99■■□□□ 1.43
EBF1-202ENST00000380654 ZSCAN30Q86W11 494 aa23.99■■□□□ 1.43
EBF1-202ENST00000380654 LAMB4A4D0S4 1761 aa23.99■■□□□ 1.43
EBF1-202ENST00000380654 CPDO75976 1380 aa23.98■■□□□ 1.43
EBF1-202ENST00000380654 ATP5JP18859 108 aa23.98■■□□□ 1.43
EBF1-202ENST00000380654 LMBR1LQ6UX01 489 aa23.98■■□□□ 1.43
EBF1-202ENST00000380654 TSPY26PQ9H489 355 aa23.98■■□□□ 1.43
EBF1-202ENST00000380654 HSPA2P54652 639 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms