RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SASH1O94885 1247 aa28.08■■■□□ 2.09
VPS16-201ENST00000380443 SGSM2O43147 1006 aa28.07■■■□□ 2.08
VPS16-201ENST00000380443 AACSQ86V21 672 aa28.07■■■□□ 2.08
VPS16-201ENST00000380443 GBP4Q96PP9 640 aa28.07■■■□□ 2.08
VPS16-201ENST00000380443 HIP1O00291 1037 aa28.06■■■□□ 2.08
VPS16-201ENST00000380443 EVI5LQ96CN4 794 aa28.06■■■□□ 2.08
VPS16-201ENST00000380443 SPATA31A5Q5VU36 1347 aa28.06■■■□□ 2.08
VPS16-201ENST00000380443 SPATA31A7Q8IWB4 1347 aa28.06■■■□□ 2.08
VPS16-201ENST00000380443 A0A087WZG4 1122 aa28.05■■■□□ 2.08
VPS16-201ENST00000380443 DISP2A7MBM2 1401 aa28.05■■■□□ 2.08
VPS16-201ENST00000380443 H7C1W4 665 aa28.04■■■□□ 2.08
VPS16-201ENST00000380443 CASP7P55210 303 aa28.04■■■□□ 2.08
VPS16-201ENST00000380443 HSPA4P34932 840 aa28.04■■■□□ 2.08
VPS16-201ENST00000380443 CWC25Q9NXE8 425 aaPredicted RBP28.04■■■□□ 2.08
VPS16-201ENST00000380443 SPATA31A1Q5TZJ5 1347 aa28.03■■■□□ 2.08
VPS16-201ENST00000380443 NUCB2P80303 420 aa28.03■■■□□ 2.08
VPS16-201ENST00000380443 EPHA10Q5JZY3 1008 aa28.03■■■□□ 2.08
VPS16-201ENST00000380443 NUP188Q5SRE5 1749 aa28.03■■■□□ 2.08
VPS16-201ENST00000380443 KIAA1211Q6ZU35 1233 aa28.03■■■□□ 2.08
VPS16-201ENST00000380443 CCDC191Q8NCU4 936 aa28.03■■■□□ 2.08
VPS16-201ENST00000380443 RFX5P48382 616 aaPredicted RBP28.02■■■□□ 2.08
VPS16-201ENST00000380443 CLEC17AQ6ZS10 378 aa28.02■■■□□ 2.08
VPS16-201ENST00000380443 UBE3BQ7Z3V4 1068 aa28.02■■■□□ 2.08
VPS16-201ENST00000380443 RAD50Q92878 1312 aa28.02■■■□□ 2.08
VPS16-201ENST00000380443 TOGARAM1Q9Y4F4 1720 aa28.02■■■□□ 2.08
VPS16-201ENST00000380443 PIP4K2AP48426 406 aaPredicted RBP28.02■■■□□ 2.08
VPS16-201ENST00000380443 EAF2Q96CJ1 260 aaPredicted RBP28.02■■■□□ 2.08
VPS16-201ENST00000380443 DIAPH3Q9NSV4 1193 aa28.02■■■□□ 2.08
VPS16-201ENST00000380443 TNPO1Q92973 898 aaKnown RBP28.01■■■□□ 2.07
VPS16-201ENST00000380443 PTCD1O75127 700 aaKnown RBP28■■■□□ 2.07
VPS16-201ENST00000380443 NEK4P51957 841 aa28■■■□□ 2.07
VPS16-201ENST00000380443 ATP5J2-PTCD1G3V325 749 aa27.99■■■□□ 2.07
VPS16-201ENST00000380443 A1BGP04217 495 aa27.99■■■□□ 2.07
VPS16-201ENST00000380443 PTPN12Q05209 780 aaKnown RBP27.99■■■□□ 2.07
VPS16-201ENST00000380443 THRAP3Q9Y2W1 955 aaKnown RBP27.99■■■□□ 2.07
VPS16-201ENST00000380443 MAP4K4O95819 1239 aaPredicted RBP27.99■■■□□ 2.07
VPS16-201ENST00000380443 CDCA7Q9BWT1 371 aaPredicted RBP27.99■■■□□ 2.07
VPS16-201ENST00000380443 ONECUT3O60422 494 aaPredicted RBP27.98■■■□□ 2.07
VPS16-201ENST00000380443 TTLL7Q6ZT98 887 aa27.98■■■□□ 2.07
VPS16-201ENST00000380443 LSG1Q9H089 658 aaKnown RBP27.98■■■□□ 2.07
VPS16-201ENST00000380443 FAM98CQ17RN3 349 aaKnown RBP27.97■■■□□ 2.07
VPS16-201ENST00000380443 STARD3NLO95772 234 aa27.97■■■□□ 2.07
VPS16-201ENST00000380443 TRIM28Q13263 835 aaKnown RBP27.97■■■□□ 2.07
VPS16-201ENST00000380443 A0A0G2JS52 829 aa27.96■■■□□ 2.07
VPS16-201ENST00000380443 PIGBQ92521 554 aa27.96■■■□□ 2.07
VPS16-201ENST00000380443 SIL1Q9H173 461 aa27.96■■■□□ 2.07
VPS16-201ENST00000380443 ATG3Q9NT62 314 aa27.96■■■□□ 2.07
VPS16-201ENST00000380443 BARGINQ6ZT62 677 aa27.95■■■□□ 2.07
VPS16-201ENST00000380443 FOXO4P98177 505 aa27.95■■■□□ 2.06
VPS16-201ENST00000380443 SKOR2Q2VWA4 1001 aaPredicted RBP27.95■■■□□ 2.06
VPS16-201ENST00000380443 SNRKQ9NRH2 765 aa27.95■■■□□ 2.06
VPS16-201ENST00000380443 PALD1Q9ULE6 856 aa27.95■■■□□ 2.06
VPS16-201ENST00000380443 EXOC5O00471 708 aa27.94■■■□□ 2.06
VPS16-201ENST00000380443 CWC27Q6UX04 472 aaKnown RBP27.94■■■□□ 2.06
VPS16-201ENST00000380443 TICAM2Q86XR7 235 aa27.94■■■□□ 2.06
VPS16-201ENST00000380443 INTS4Q96HW7 963 aaKnown RBP27.94■■■□□ 2.06
VPS16-201ENST00000380443 ISCA1Q9BUE6 129 aa27.94■■■□□ 2.06
VPS16-201ENST00000380443 CCDC8Q9H0W5 538 aaPredicted RBP27.94■■■□□ 2.06
VPS16-201ENST00000380443 GPR108Q9NPR9 543 aa27.94■■■□□ 2.06
VPS16-201ENST00000380443 FOXD4L1Q9NU39 408 aa27.94■■■□□ 2.06
VPS16-201ENST00000380443 SEPT12Q8IYM1 358 aa27.93■■■□□ 2.06
VPS16-201ENST00000380443 GOLGA6L22H0YM25 854 aa27.92■■■□□ 2.06
VPS16-201ENST00000380443 ATP5JP18859 108 aa27.92■■■□□ 2.06
VPS16-201ENST00000380443 CUL4AQ13619 759 aa27.92■■■□□ 2.06
VPS16-201ENST00000380443 TNNI3KQ59H18 835 aa27.92■■■□□ 2.06
VPS16-201ENST00000380443 LMBR1LQ6UX01 489 aa27.92■■■□□ 2.06
VPS16-201ENST00000380443 IL25Q9H293 177 aa27.92■■■□□ 2.06
VPS16-201ENST00000380443 FPGT-TNNI3KV9GXZ4 949 aa27.92■■■□□ 2.06
VPS16-201ENST00000380443 TRAK2O60296 914 aa27.92■■■□□ 2.06
VPS16-201ENST00000380443 TCIRG1Q13488 830 aa27.92■■■□□ 2.06
VPS16-201ENST00000380443 BCL9O00512 1426 aa27.92■■■□□ 2.06
VPS16-201ENST00000380443 RFX7Q2KHR2 1363 aa27.91■■■□□ 2.06
VPS16-201ENST00000380443 ITGB4P16144 1822 aa27.91■■■□□ 2.06
VPS16-201ENST00000380443 KIF6Q6ZMV9 814 aa27.91■■■□□ 2.06
VPS16-201ENST00000380443 KLHDC4Q8TBB5 520 aa27.91■■■□□ 2.06
VPS16-201ENST00000380443 TMX3Q96JJ7 454 aa27.91■■■□□ 2.06
VPS16-201ENST00000380443 TJP1Q07157 1748 aa27.91■■■□□ 2.06
VPS16-201ENST00000380443 CYP2E1P05181 493 aaPredicted RBP27.9■■■□□ 2.06
VPS16-201ENST00000380443 KCNB2Q92953 911 aa27.9■■■□□ 2.06
VPS16-201ENST00000380443 ZBTB3Q9H5J0 574 aa27.9■■■□□ 2.06
VPS16-201ENST00000380443 FBXO3Q9UK99 471 aa27.9■■■□□ 2.06
VPS16-201ENST00000380443 ASAP1Q9ULH1 1129 aa27.9■■■□□ 2.06
VPS16-201ENST00000380443 TFCP2Q12800 502 aa27.89■■■□□ 2.06
VPS16-201ENST00000380443 WNK3Q9BYP7 1800 aa27.89■■■□□ 2.06
VPS16-201ENST00000380443 IL15P40933 162 aaPredicted RBP27.88■■■□□ 2.05
VPS16-201ENST00000380443 SNX14Q9Y5W7 946 aa27.88■■■□□ 2.05
VPS16-201ENST00000380443 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.88■■■□□ 2.05
VPS16-201ENST00000380443 CIAO1O76071 339 aa27.88■■■□□ 2.05
VPS16-201ENST00000380443 DNAJC10Q8IXB1 793 aa27.88■■■□□ 2.05
VPS16-201ENST00000380443 JARID2Q92833 1246 aaPredicted RBP27.88■■■□□ 2.05
VPS16-201ENST00000380443 THSD7AQ9UPZ6 1657 aa27.87■■■□□ 2.05
VPS16-201ENST00000380443 HSP90AB3PQ58FF7 597 aa27.87■■■□□ 2.05
VPS16-201ENST00000380443 TM6SF1Q9BZW5 370 aa27.87■■■□□ 2.05
VPS16-201ENST00000380443 TLR7Q9NYK1 1049 aaKnown RBP27.87■■■□□ 2.05
VPS16-201ENST00000380443 PLA2G12BQ9BX93 195 aa27.86■■■□□ 2.05
VPS16-201ENST00000380443 BOLA2Q9H3K6 86 aa27.86■■■□□ 2.05
VPS16-201ENST00000380443 SSFA2P28290 1259 aa27.85■■■□□ 2.05
VPS16-201ENST00000380443 FSD1Q9BTV5 496 aa27.85■■■□□ 2.05
VPS16-201ENST00000380443 DBNLQ9UJU6 430 aaKnown RBP27.85■■■□□ 2.05
VPS16-201ENST00000380443 CCDC171Q6TFL3 1326 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms