RNA–Protein interactions for RNA: ENST00000379698.8

SH3KBP1-202, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH3KBP1, Length 2,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-202ENST00000379698 FER1L4A9Z1Z3 1794 aa15.56■□□□□ 0.08
SH3KBP1-202ENST00000379698 ST3GAL1Q11201 340 aa15.56■□□□□ 0.08
SH3KBP1-202ENST00000379698 GIMAP6Q6P9H5 292 aa15.56■□□□□ 0.08
SH3KBP1-202ENST00000379698 LRRC59Q96AG4 307 aaKnown RBP15.56■□□□□ 0.08
SH3KBP1-202ENST00000379698 PRIMPOLQ96LW4 560 aa15.56■□□□□ 0.08
SH3KBP1-202ENST00000379698 ALDH8A1Q9H2A2 487 aaPredicted RBP15.56■□□□□ 0.08
SH3KBP1-202ENST00000379698 SASH1O94885 1247 aa15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 TPM3P06753 285 aa15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 KRT85P78386 507 aa15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 NMIQ13287 307 aaPredicted RBP15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 NOLC1Q14978 699 aaKnown RBP eCLIP15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 PROSER3Q2NL68 480 aa15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 DNTTIP2Q5QJE6 756 aaKnown RBP15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 LARP1BQ659C4 914 aaKnown RBP15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 ELP1O95163 1332 aa15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 ZBTB7CA1YPR0 619 aa15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 SLC27A2O14975 620 aa15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 HMGN5P82970 282 aaKnown RBP15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 EAF2Q96CJ1 260 aaPredicted RBP15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 SUCLG2Q96I99 432 aa15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 TPCN1Q9ULQ1 816 aa15.55■□□□□ 0.08
SH3KBP1-202ENST00000379698 CCDC192P0DO97 292 aa15.54■□□□□ 0.08
SH3KBP1-202ENST00000379698 TPRNQ4KMQ1 711 aa15.54■□□□□ 0.08
SH3KBP1-202ENST00000379698 FAM227BQ96M60 508 aa15.54■□□□□ 0.08
SH3KBP1-202ENST00000379698 DDX21Q9NR30 783 aaKnown RBP eCLIP15.54■□□□□ 0.08
SH3KBP1-202ENST00000379698 BLOC1S2Q6QNY1 142 aa15.54■□□□□ 0.08
SH3KBP1-202ENST00000379698 NECAB1Q8N987 351 aa15.54■□□□□ 0.08
SH3KBP1-202ENST00000379698 MYRIPQ8NFW9 859 aa15.54■□□□□ 0.08
SH3KBP1-202ENST00000379698 BICC1Q9H694 974 aaKnown RBP15.54■□□□□ 0.08
SH3KBP1-202ENST00000379698 PXDNQ92626 1479 aa15.54■□□□□ 0.08
SH3KBP1-202ENST00000379698 KAZALD1Q96I82 304 aa15.53■□□□□ 0.08
SH3KBP1-202ENST00000379698 SPTLC3Q9NUV7 552 aa15.53■□□□□ 0.08
SH3KBP1-202ENST00000379698 LMTK3Q96Q04 1460 aa15.53■□□□□ 0.08
SH3KBP1-202ENST00000379698 RGPD2P0DJD1 1756 aa15.53■□□□□ 0.08
SH3KBP1-202ENST00000379698 ZNF830Q96NB3 372 aaPredicted RBP15.53■□□□□ 0.08
SH3KBP1-202ENST00000379698 TTC12Q9H892 705 aaPredicted RBP15.53■□□□□ 0.08
SH3KBP1-202ENST00000379698 HMG20BQ9P0W2 317 aa15.53■□□□□ 0.08
SH3KBP1-202ENST00000379698 ARHGEF25Q86VW2 580 aa15.52■□□□□ 0.08
SH3KBP1-202ENST00000379698 FSD1Q9BTV5 496 aa15.52■□□□□ 0.08
SH3KBP1-202ENST00000379698 CCDC8Q9H0W5 538 aaPredicted RBP15.52■□□□□ 0.08
SH3KBP1-202ENST00000379698 MED23Q9ULK4 1368 aa15.52■□□□□ 0.08
SH3KBP1-202ENST00000379698 RPS6KB1P23443 525 aa15.52■□□□□ 0.07
SH3KBP1-202ENST00000379698 ESCO1Q5FWF5 840 aa15.52■□□□□ 0.07
SH3KBP1-202ENST00000379698 TSGA10IPQ3SY00 556 aa15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 TTC6Q86TZ1 520 aa15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 JCADQ9P266 1359 aa15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 NPHP4O75161 1426 aaPredicted RBP15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 GOLGA6L6A8MZA4 724 aa15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 GCP02774 474 aa15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 LARP1Q6PKG0 1096 aaKnown RBP15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 SCAND2PQ9GZW5 306 aaPredicted RBP15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 A0A0D9SFI3 127 aa15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 MAP3K11Q16584 847 aa15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 MPNDQ8N594 471 aa15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 DDX54Q8TDD1 881 aaKnown RBP15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 NUP62CLQ9H1M0 184 aa15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 BOLA2Q9H3K6 86 aa15.51■□□□□ 0.07
SH3KBP1-202ENST00000379698 PRAMEF22A3QJZ6 481 aa15.5■□□□□ 0.07
SH3KBP1-202ENST00000379698 PLCB2Q00722 1185 aa15.5■□□□□ 0.07
SH3KBP1-202ENST00000379698 CDC37L1Q7L3B6 337 aa15.5■□□□□ 0.07
SH3KBP1-202ENST00000379698 FAM200AQ8TCP9 573 aa15.5■□□□□ 0.07
SH3KBP1-202ENST00000379698 ANKRD24Q8TF21 1146 aa15.5■□□□□ 0.07
SH3KBP1-202ENST00000379698 MRC1P22897 1456 aa15.5■□□□□ 0.07
SH3KBP1-202ENST00000379698 SLIT3O75094 1523 aa15.5■□□□□ 0.07
SH3KBP1-202ENST00000379698 NEXNQ0ZGT2 675 aa15.5■□□□□ 0.07
SH3KBP1-202ENST00000379698 KRT32Q14532 448 aa15.5■□□□□ 0.07
SH3KBP1-202ENST00000379698 SETD1BQ9UPS6 1966 aaKnown RBP15.49■□□□□ 0.07
SH3KBP1-202ENST00000379698 GTF2F1P35269 517 aaKnown RBP eCLIP15.49■□□□□ 0.07
SH3KBP1-202ENST00000379698 RIC3Q7Z5B4 369 aa15.49■□□□□ 0.07
SH3KBP1-202ENST00000379698 ZMYND15Q9H091 742 aa15.49■□□□□ 0.07
SH3KBP1-202ENST00000379698 TLR7Q9NYK1 1049 aaKnown RBP15.49■□□□□ 0.07
SH3KBP1-202ENST00000379698 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.49■□□□□ 0.07
SH3KBP1-202ENST00000379698 SIPA1L3O60292 1781 aaPredicted RBP15.49■□□□□ 0.07
SH3KBP1-202ENST00000379698 IGKV5-2P06315 115 aa15.49■□□□□ 0.07
SH3KBP1-202ENST00000379698 AIMP1Q12904 312 aaKnown RBP15.49■□□□□ 0.07
SH3KBP1-202ENST00000379698 PDIA6Q15084 440 aa15.49■□□□□ 0.07
SH3KBP1-202ENST00000379698 CAMTA1Q9Y6Y1 1673 aa15.48■□□□□ 0.07
SH3KBP1-202ENST00000379698 NPHP3Q7Z494 1330 aa15.48■□□□□ 0.07
SH3KBP1-202ENST00000379698 ADAMTS7Q9UKP4 1686 aa15.48■□□□□ 0.07
SH3KBP1-202ENST00000379698 TOB2Q14106 344 aaPredicted RBP15.48■□□□□ 0.07
SH3KBP1-202ENST00000379698 FERMT3Q86UX7 667 aa15.48■□□□□ 0.07
SH3KBP1-202ENST00000379698 DDX19AQ9NUU7 478 aaKnown RBP15.48■□□□□ 0.07
SH3KBP1-202ENST00000379698 GOLGA6L4A6NEF3 574 aa15.48■□□□□ 0.07
SH3KBP1-202ENST00000379698 AP5Z1O43299 807 aa15.48■□□□□ 0.07
SH3KBP1-202ENST00000379698 USPL1Q5W0Q7 1092 aa15.48■□□□□ 0.07
SH3KBP1-202ENST00000379698 KIAA1524Q8TCG1 905 aa15.48■□□□□ 0.07
SH3KBP1-202ENST00000379698 SIL1Q9H173 461 aa15.48■□□□□ 0.07
SH3KBP1-202ENST00000379698 DTNBO60941 627 aa15.47■□□□□ 0.07
SH3KBP1-202ENST00000379698 SPATA32Q96LK8 384 aa15.47■□□□□ 0.07
SH3KBP1-202ENST00000379698 RFX7Q2KHR2 1363 aa15.47■□□□□ 0.07
SH3KBP1-202ENST00000379698 NEURL1BA8MQ27 555 aa15.47■□□□□ 0.07
SH3KBP1-202ENST00000379698 TAF5LO75529 589 aa15.47■□□□□ 0.07
SH3KBP1-202ENST00000379698 LIG1P18858 919 aa15.47■□□□□ 0.07
SH3KBP1-202ENST00000379698 TYRO3Q06418 890 aa15.47■□□□□ 0.07
SH3KBP1-202ENST00000379698 ANKLE2Q86XL3 938 aa15.47■□□□□ 0.07
SH3KBP1-202ENST00000379698 ATP5JP18859 108 aa15.46■□□□□ 0.07
SH3KBP1-202ENST00000379698 GCKRQ14397 625 aa15.46■□□□□ 0.07
SH3KBP1-202ENST00000379698 TNMDQ9H2S6 317 aa15.46■□□□□ 0.07
SH3KBP1-202ENST00000379698 COPRSQ9NQ92 184 aa15.46■□□□□ 0.07
SH3KBP1-202ENST00000379698 MRVI1Q9Y6F6 885 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms