RNA–Protein interactions for RNA: ENST00000379205.4

C4orf46-201, Transcript of chromosome 4 open reading frame 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4orf46, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-201ENST00000379205 SFPQP23246 707 aaKnown RBP eCLIP11.6□□□□□ -0.55
C4orf46-201ENST00000379205 LMOD1P29536 600 aaPredicted RBP11.6□□□□□ -0.55
C4orf46-201ENST00000379205 USHBP1Q8N6Y0 703 aa11.6□□□□□ -0.55
C4orf46-201ENST00000379205 EDC3Q96F86 508 aaKnown RBP11.6□□□□□ -0.55
C4orf46-201ENST00000379205 RBM6P78332 1123 aaKnown RBP11.59□□□□□ -0.55
C4orf46-201ENST00000379205 TEFQ10587 303 aa11.59□□□□□ -0.55
C4orf46-201ENST00000379205 CREBRFQ8IUR6 639 aa11.59□□□□□ -0.55
C4orf46-201ENST00000379205 FSIP1Q8NA03 581 aa11.59□□□□□ -0.55
C4orf46-201ENST00000379205 ERO1AQ96HE7 468 aa11.59□□□□□ -0.55
C4orf46-201ENST00000379205 USP44Q9H0E7 712 aa11.59□□□□□ -0.55
C4orf46-201ENST00000379205 SH2B1Q9NRF2 756 aaPredicted RBP11.59□□□□□ -0.55
C4orf46-201ENST00000379205 SOS1Q07889 1333 aaPredicted RBP11.59□□□□□ -0.55
C4orf46-201ENST00000379205 ANKRD65E5RJM6 399 aa11.59□□□□□ -0.55
C4orf46-201ENST00000379205 CREB3L3Q68CJ9 461 aa11.59□□□□□ -0.55
C4orf46-201ENST00000379205 TMEM87AQ8NBN3 555 aa11.59□□□□□ -0.55
C4orf46-201ENST00000379205 IFNKQ9P0W0 207 aa11.59□□□□□ -0.55
C4orf46-201ENST00000379205 NPHP3Q7Z494 1330 aa11.59□□□□□ -0.55
C4orf46-201ENST00000379205 CLSTN2Q9H4D0 955 aa11.59□□□□□ -0.55
C4orf46-201ENST00000379205 PIK3R4Q99570 1358 aa11.58□□□□□ -0.55
C4orf46-201ENST00000379205 CCDC171Q6TFL3 1326 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 PREX2Q70Z35 1606 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 PI4KAP2A4QPH2 592 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 CHST3Q7LGC8 479 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 CEP57L1Q8IYX8 460 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 PI4KAP1Q8N8J0 262 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 TTC14Q96N46 770 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 CARD6Q9BX69 1037 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 RSPH14Q9UHP6 348 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 GLRX3O76003 335 aaKnown RBP11.58□□□□□ -0.56
C4orf46-201ENST00000379205 PSMA5P28066 241 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 NMIQ13287 307 aaPredicted RBP11.58□□□□□ -0.56
C4orf46-201ENST00000379205 RNF20Q5VTR2 975 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 CCDC191Q8NCU4 936 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 CHMP4CQ96CF2 233 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 TAF6LQ9Y6J9 622 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 ADGRL1O94910 1474 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 LRRC7Q96NW7 1537 aa11.58□□□□□ -0.56
C4orf46-201ENST00000379205 POLR3DP05423 398 aaPredicted RBP11.57□□□□□ -0.56
C4orf46-201ENST00000379205 CLCN6P51797 869 aa11.57□□□□□ -0.56
C4orf46-201ENST00000379205 GPS2Q13227 327 aa11.57□□□□□ -0.56
C4orf46-201ENST00000379205 IPO4Q8TEX9 1081 aaKnown RBP11.57□□□□□ -0.56
C4orf46-201ENST00000379205 PGBD1Q96JS3 809 aa11.57□□□□□ -0.56
C4orf46-201ENST00000379205 FAM135BQ49AJ0 1406 aa11.57□□□□□ -0.56
C4orf46-201ENST00000379205 RPGRIP1LQ68CZ1 1315 aa11.57□□□□□ -0.56
C4orf46-201ENST00000379205 A0A1B0GVL5 298 aa11.57□□□□□ -0.56
C4orf46-201ENST00000379205 PHACTR2O75167 634 aa11.57□□□□□ -0.56
C4orf46-201ENST00000379205 MAP3K4Q9Y6R4 1608 aa11.57□□□□□ -0.56
C4orf46-201ENST00000379205 SERPINC1P01008 464 aa11.57□□□□□ -0.56
C4orf46-201ENST00000379205 VPS53Q5VIR6 699 aa11.57□□□□□ -0.56
C4orf46-201ENST00000379205 OTUD7BQ6GQQ9 843 aa11.57□□□□□ -0.56
C4orf46-201ENST00000379205 MCM6Q14566 821 aa11.56□□□□□ -0.56
C4orf46-201ENST00000379205 KLHDC4Q8TBB5 520 aa11.56□□□□□ -0.56
C4orf46-201ENST00000379205 G3BP1Q13283 466 aaKnown RBP eCLIP11.56□□□□□ -0.56
C4orf46-201ENST00000379205 STX1AQ16623 288 aa11.56□□□□□ -0.56
C4orf46-201ENST00000379205 TRIM66O15016 1216 aa11.56□□□□□ -0.56
C4orf46-201ENST00000379205 ST5P78524 1137 aa11.56□□□□□ -0.56
C4orf46-201ENST00000379205 CFAP100Q494V2 611 aa11.56□□□□□ -0.56
C4orf46-201ENST00000379205 NCOA5Q9HCD5 579 aaKnown RBP11.56□□□□□ -0.56
C4orf46-201ENST00000379205 YTHDC2Q9H6S0 1430 aaKnown RBP11.55□□□□□ -0.56
C4orf46-201ENST00000379205 TPM4P67936 248 aa11.55□□□□□ -0.56
C4orf46-201ENST00000379205 CCDC129Q6ZRS4 1044 aa11.55□□□□□ -0.56
C4orf46-201ENST00000379205 PLA2G4DQ86XP0 818 aa11.55□□□□□ -0.56
C4orf46-201ENST00000379205 ECHDC1Q9NTX5 307 aa11.55□□□□□ -0.56
C4orf46-201ENST00000379205 SPHKAPQ2M3C7 1700 aa11.55□□□□□ -0.56
C4orf46-201ENST00000379205 CAPN2P17655 700 aa11.55□□□□□ -0.56
C4orf46-201ENST00000379205 TDRD7Q8NHU6 1098 aaKnown RBP11.55□□□□□ -0.56
C4orf46-201ENST00000379205 UTP14AQ9BVJ6 771 aaKnown RBP11.55□□□□□ -0.56
C4orf46-201ENST00000379205 ANO10Q9NW15 660 aa11.55□□□□□ -0.56
C4orf46-201ENST00000379205 CFAP45Q9UL16 551 aa11.55□□□□□ -0.56
C4orf46-201ENST00000379205 STK38Q15208 465 aa11.55□□□□□ -0.56
C4orf46-201ENST00000379205 NGDNQ8NEJ9 315 aaKnown RBP11.55□□□□□ -0.56
C4orf46-201ENST00000379205 XPO4Q9C0E2 1151 aaKnown RBP11.55□□□□□ -0.56
C4orf46-201ENST00000379205 NAT10Q9H0A0 1025 aaKnown RBP11.55□□□□□ -0.56
C4orf46-201ENST00000379205 FANCAO15360 1455 aa11.54□□□□□ -0.56
C4orf46-201ENST00000379205 PNMA6AP0CW24 399 aaPredicted RBP11.54□□□□□ -0.56
C4orf46-201ENST00000379205 PI4K2BQ8TCG2 481 aa11.54□□□□□ -0.56
C4orf46-201ENST00000379205 ARHGEF40Q8TER5 1519 aa11.54□□□□□ -0.56
C4orf46-201ENST00000379205 SLC27A2O14975 620 aa11.54□□□□□ -0.56
C4orf46-201ENST00000379205 OAS2P29728 719 aaKnown RBP11.54□□□□□ -0.56
C4orf46-201ENST00000379205 GNG11P61952 73 aa11.54□□□□□ -0.56
C4orf46-201ENST00000379205 RAD51AP2Q09MP3 1159 aa11.54□□□□□ -0.56
C4orf46-201ENST00000379205 SEC62Q99442 399 aaKnown RBP11.54□□□□□ -0.56
C4orf46-201ENST00000379205 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
C4orf46-201ENST00000379205 ZNF446Q9NWS9 450 aa11.54□□□□□ -0.56
C4orf46-201ENST00000379205 STAP2Q9UGK3 403 aa11.54□□□□□ -0.56
C4orf46-201ENST00000379205 CCDC61Q9Y6R9 512 aa11.54□□□□□ -0.56
C4orf46-201ENST00000379205 CHGBP05060 677 aa11.53□□□□□ -0.56
C4orf46-201ENST00000379205 EVCP57679 992 aa11.53□□□□□ -0.56
C4orf46-201ENST00000379205 Q6ZUG5 572 aa11.53□□□□□ -0.56
C4orf46-201ENST00000379205 GPATCH11Q8N954 259 aa11.53□□□□□ -0.56
C4orf46-201ENST00000379205 ST3GAL1Q11201 340 aa11.53□□□□□ -0.56
C4orf46-201ENST00000379205 CWF19L2Q2TBE0 894 aaKnown RBP11.53□□□□□ -0.56
C4orf46-201ENST00000379205 LMOD2Q6P5Q4 547 aa11.53□□□□□ -0.56
C4orf46-201ENST00000379205 TULP4Q9NRJ4 1543 aa11.53□□□□□ -0.56
C4orf46-201ENST00000379205 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
C4orf46-201ENST00000379205 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.53□□□□□ -0.56
C4orf46-201ENST00000379205 NPATQ14207 1427 aa11.52□□□□□ -0.56
C4orf46-201ENST00000379205 A0A0D9SFI3 127 aa11.52□□□□□ -0.56
C4orf46-201ENST00000379205 WASLO00401 505 aaPredicted RBP11.52□□□□□ -0.56
C4orf46-201ENST00000379205 KARSQ15046 597 aaKnown RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms