RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 NUTM1Q86Y26 1132 aa22.04■■□□□ 1.12
RER1-202ENST00000378512 DNAJC5GQ8N7S2 189 aa22.04■■□□□ 1.12
RER1-202ENST00000378512 XAGE3Q8WTP9 111 aa22.04■■□□□ 1.12
RER1-202ENST00000378512 TAOK3Q9H2K8 898 aa22.04■■□□□ 1.12
RER1-202ENST00000378512 WDR90Q96KV7 1748 aa22.04■■□□□ 1.12
RER1-202ENST00000378512 GPTP24298 496 aa22.03■■□□□ 1.12
RER1-202ENST00000378512 ERFEQ4G0M1 354 aa22.03■■□□□ 1.12
RER1-202ENST00000378512 DICER1Q9UPY3 1922 aaKnown RBP22.03■■□□□ 1.12
RER1-202ENST00000378512 CACNA1FO60840 1977 aa22.02■■□□□ 1.12
RER1-202ENST00000378512 NPR1P16066 1061 aa22.02■■□□□ 1.12
RER1-202ENST00000378512 TSR2Q969E8 191 aaKnown RBP22.02■■□□□ 1.12
RER1-202ENST00000378512 NYXQ9GZU5 481 aa22.02■■□□□ 1.12
RER1-202ENST00000378512 HYPKQ9NX55 129 aa22.02■■□□□ 1.12
RER1-202ENST00000378512 LTBP3Q9NS15 1303 aa22.02■■□□□ 1.11
RER1-202ENST00000378512 FSTL1Q12841 308 aa22.01■■□□□ 1.11
RER1-202ENST00000378512 SLC51AQ86UW1 340 aa22.01■■□□□ 1.11
RER1-202ENST00000378512 TSPYL6Q8N831 410 aa22.01■■□□□ 1.11
RER1-202ENST00000378512 CCER2I3L3R5 266 aa22■■□□□ 1.11
RER1-202ENST00000378512 NTSR2O95665 410 aa22■■□□□ 1.11
RER1-202ENST00000378512 PARP10Q53GL7 1025 aa22■■□□□ 1.11
RER1-202ENST00000378512 SUSD4Q5VX71 490 aa22■■□□□ 1.11
RER1-202ENST00000378512 ZNF521Q96K83 1311 aa22■■□□□ 1.11
RER1-202ENST00000378512 ELL2O00472 640 aaPredicted RBP21.99■■□□□ 1.11
RER1-202ENST00000378512 VEGFAP15692 232 aaPredicted RBP21.99■■□□□ 1.11
RER1-202ENST00000378512 AIMP1Q12904 312 aaKnown RBP21.99■■□□□ 1.11
RER1-202ENST00000378512 HSP90AB3PQ58FF7 597 aa21.99■■□□□ 1.11
RER1-202ENST00000378512 PLBD2Q8NHP8 589 aa21.99■■□□□ 1.11
RER1-202ENST00000378512 CHMP4AQ9BY43 222 aa21.99■■□□□ 1.11
RER1-202ENST00000378512 GTF2E1P29083 439 aaPredicted RBP21.98■■□□□ 1.11
RER1-202ENST00000378512 TCIRG1Q13488 830 aa21.98■■□□□ 1.11
RER1-202ENST00000378512 CRY2Q49AN0 593 aa21.98■■□□□ 1.11
RER1-202ENST00000378512 RNF123Q5XPI4 1314 aa21.98■■□□□ 1.11
RER1-202ENST00000378512 FANCIQ9NVI1 1328 aa21.98■■□□□ 1.11
RER1-202ENST00000378512 LAMB2P55268 1798 aa21.98■■□□□ 1.11
RER1-202ENST00000378512 DDNO94850 711 aaPredicted RBP21.97■■□□□ 1.11
RER1-202ENST00000378512 ANKRD13DQ6ZTN6 518 aa21.97■■□□□ 1.11
RER1-202ENST00000378512 SMC1BQ8NDV3 1235 aa21.97■■□□□ 1.11
RER1-202ENST00000378512 CCDC93Q567U6 631 aa21.97■■□□□ 1.11
RER1-202ENST00000378512 CCDC30Q5VVM6 783 aa21.97■■□□□ 1.11
RER1-202ENST00000378512 C3orf67Q6ZVT6 689 aa21.97■■□□□ 1.11
RER1-202ENST00000378512 PPP1R42Q7Z4L9 355 aa21.97■■□□□ 1.11
RER1-202ENST00000378512 SPINK5Q9NQ38 1064 aaPredicted RBP21.97■■□□□ 1.11
RER1-202ENST00000378512 ZNF277Q9NRM2 450 aaPredicted RBP21.97■■□□□ 1.11
RER1-202ENST00000378512 SOGA3Q5TF21 947 aa21.96■■□□□ 1.11
RER1-202ENST00000378512 NLRP10Q86W26 655 aa21.96■■□□□ 1.11
RER1-202ENST00000378512 DDX60Q8IY21 1712 aaKnown RBP21.95■■□□□ 1.1
RER1-202ENST00000378512 TWISTNBQ3B726 338 aaPredicted RBP21.95■■□□□ 1.1
RER1-202ENST00000378512 SLC10A5Q5PT55 438 aa21.95■■□□□ 1.1
RER1-202ENST00000378512 DPY19L2Q6NUT2 758 aa21.95■■□□□ 1.1
RER1-202ENST00000378512 ISCA1Q9BUE6 129 aa21.95■■□□□ 1.1
RER1-202ENST00000378512 PHAXQ9H814 394 aaKnown RBP21.95■■□□□ 1.1
RER1-202ENST00000378512 SALL2Q9Y467 1007 aaPredicted RBP21.95■■□□□ 1.1
RER1-202ENST00000378512 POTEIP0CG38 1075 aa21.94■■□□□ 1.1
RER1-202ENST00000378512 POTEJP0CG39 1038 aa21.94■■□□□ 1.1
RER1-202ENST00000378512 SNED1Q8TER0 1413 aa21.94■■□□□ 1.1
RER1-202ENST00000378512 FKBP4Q02790 459 aaKnown RBP eCLIP21.93■■□□□ 1.14e-6■■□□□ 13.6
RER1-202ENST00000378512 TRIM28Q13263 835 aaKnown RBP21.93■■□□□ 1.1
RER1-202ENST00000378512 UTP14AQ9BVJ6 771 aaKnown RBP21.93■■□□□ 1.1
RER1-202ENST00000378512 ZNF541Q9H0D2 1346 aa21.93■■□□□ 1.1
RER1-202ENST00000378512 HOXA10P31260 410 aaPredicted RBP21.92■■□□□ 1.1
RER1-202ENST00000378512 ALDH1B1P30837 517 aa21.91■■□□□ 1.1
RER1-202ENST00000378512 ZNF428Q96B54 188 aa21.91■■□□□ 1.1
RER1-202ENST00000378512 VAMP4O75379 141 aa21.9■■□□□ 1.1
RER1-202ENST00000378512 COL4A5P29400 1685 aa21.9■■□□□ 1.1
RER1-202ENST00000378512 KLRG1Q96E93 195 aa21.9■■□□□ 1.1
RER1-202ENST00000378512 TCERG1O14776 1098 aaKnown RBP21.89■■□□□ 1.1
RER1-202ENST00000378512 GOLGA2Q08379 1002 aa21.89■■□□□ 1.1
RER1-202ENST00000378512 SYNE4Q8N205 404 aa21.89■■□□□ 1.1
RER1-202ENST00000378512 EXOSC9Q06265 439 aaKnown RBP21.89■■□□□ 1.09
RER1-202ENST00000378512 RTKN2Q8IZC4 609 aa21.89■■□□□ 1.09
RER1-202ENST00000378512 RPGRQ92834 1020 aaKnown RBP21.89■■□□□ 1.09
RER1-202ENST00000378512 MYH16Q9H6N6 1097 aa21.88■■□□□ 1.09
RER1-202ENST00000378512 SH3TC1Q8TE82 1336 aa21.87■■□□□ 1.09
RER1-202ENST00000378512 IARSP41252 1262 aaKnown RBP21.87■■□□□ 1.09
RER1-202ENST00000378512 RIC3Q7Z5B4 369 aa21.87■■□□□ 1.09
RER1-202ENST00000378512 CRAMP1Q96RY5 1269 aa21.87■■□□□ 1.09
RER1-202ENST00000378512 STK31Q9BXU1 1019 aa21.87■■□□□ 1.09
RER1-202ENST00000378512 TRMT112Q9UI30 125 aaKnown RBP21.87■■□□□ 1.09
RER1-202ENST00000378512 NLRP3Q96P20 1036 aa21.86■■□□□ 1.09
RER1-202ENST00000378512 ATP5J2-PTCD1G3V325 749 aa21.85■■□□□ 1.09
RER1-202ENST00000378512 DDX58O95786 925 aaKnown RBP21.85■■□□□ 1.09
RER1-202ENST00000378512 METTL22Q9BUU2 404 aaPredicted RBP21.85■■□□□ 1.09
RER1-202ENST00000378512 SLC4A2P04920 1241 aa21.84■■□□□ 1.09
RER1-202ENST00000378512 DIEXFQ68CQ4 756 aaKnown RBP21.84■■□□□ 1.09
RER1-202ENST00000378512 KSR2Q6VAB6 950 aa21.84■■□□□ 1.09
RER1-202ENST00000378512 G2E3Q7L622 706 aa21.84■■□□□ 1.09
RER1-202ENST00000378512 L3MBTL3Q96JM7 780 aaPredicted RBP21.84■■□□□ 1.09
RER1-202ENST00000378512 PCNTO95613 3336 aa21.84■■□□□ 1.09
RER1-202ENST00000378512 TAF1P21675 1872 aa21.84■■□□□ 1.09
RER1-202ENST00000378512 PPEF1O14829 653 aaPredicted RBP21.83■■□□□ 1.09
RER1-202ENST00000378512 HCLS1P14317 486 aaPredicted RBP21.83■■□□□ 1.09
RER1-202ENST00000378512 CHADLQ6NUI6 762 aa21.83■■□□□ 1.09
RER1-202ENST00000378512 JMYQ8N9B5 988 aa21.83■■□□□ 1.09
RER1-202ENST00000378512 CCDC191Q8NCU4 936 aa21.83■■□□□ 1.09
RER1-202ENST00000378512 RBM17Q96I25 401 aaKnown RBP21.83■■□□□ 1.09
RER1-202ENST00000378512 PSMD1Q99460 953 aa21.83■■□□□ 1.09
RER1-202ENST00000378512 TAF1DQ9H5J8 278 aaPredicted RBP21.83■■□□□ 1.09
RER1-202ENST00000378512 PI4KAP2A4QPH2 592 aa21.82■■□□□ 1.08
RER1-202ENST00000378512 FZD9O00144 591 aa21.82■■□□□ 1.08
RER1-202ENST00000378512 IFFO2Q5TF58 517 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms