RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 SPATA31E1Q6ZUB1 1445 aa13.1□□□□□ -0.31
RPGR-203ENST00000378505 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
RPGR-203ENST00000378505 POLR3DP05423 398 aaPredicted RBP13.1□□□□□ -0.31
RPGR-203ENST00000378505 TNNT1P13805 278 aa13.1□□□□□ -0.31
RPGR-203ENST00000378505 TMEM67Q5HYA8 995 aa13.1□□□□□ -0.31
RPGR-203ENST00000378505 LMBR1LQ6UX01 489 aa13.1□□□□□ -0.31
RPGR-203ENST00000378505 ZSCAN29Q8IWY8 852 aaPredicted RBP13.1□□□□□ -0.31
RPGR-203ENST00000378505 TCEANC2Q96MN5 208 aa13.1□□□□□ -0.31
RPGR-203ENST00000378505 PRM3Q9NNZ6 103 aa13.1□□□□□ -0.31
RPGR-203ENST00000378505 ZPR1O75312 459 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 SLC39A6Q13433 755 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 IQCEQ6IPM2 695 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 DZIP1Q86YF9 867 aaKnown RBP13.09□□□□□ -0.31
RPGR-203ENST00000378505 INTS4Q96HW7 963 aaKnown RBP13.09□□□□□ -0.31
RPGR-203ENST00000378505 HMGB2P26583 209 aaKnown RBP13.09□□□□□ -0.31
RPGR-203ENST00000378505 RDXP35241 583 aaKnown RBP13.09□□□□□ -0.31
RPGR-203ENST00000378505 MCMDC2Q4G0Z9 681 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 USP48Q86UV5 1035 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 USP26Q9BXU7 913 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 DMRT2Q9Y5R5 561 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 UQCRFS1P1P0C7P4 283 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 IL15P40933 162 aaPredicted RBP13.09□□□□□ -0.31
RPGR-203ENST00000378505 RBM25P49756 843 aaKnown RBP13.09□□□□□ -0.31
RPGR-203ENST00000378505 RBM5P52756 815 aaKnown RBP eCLIP13.09□□□□□ -0.31
RPGR-203ENST00000378505 CATIPQ7Z7H3 387 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 MICU3Q86XE3 530 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 ABCC2Q92887 1545 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 CHMLP26374 656 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 CLCN1P35523 988 aa13.09□□□□□ -0.31
RPGR-203ENST00000378505 CDC5LQ99459 802 aaKnown RBP13.09□□□□□ -0.31
RPGR-203ENST00000378505 IL13P35225 146 aa13.08□□□□□ -0.31
RPGR-203ENST00000378505 METAP2P50579 478 aaKnown RBP eCLIP13.08□□□□□ -0.31
RPGR-203ENST00000378505 KIAA1328Q86T90 577 aa13.08□□□□□ -0.31
RPGR-203ENST00000378505 SEC63Q9UGP8 760 aaKnown RBP13.08□□□□□ -0.31
RPGR-203ENST00000378505 CNPY2Q9Y2B0 182 aa13.08□□□□□ -0.31
RPGR-203ENST00000378505 MAP3K5Q99683 1374 aa13.08□□□□□ -0.32
RPGR-203ENST00000378505 BLMP54132 1417 aaPredicted RBP13.08□□□□□ -0.32
RPGR-203ENST00000378505 H0YHG0 523 aa13.08□□□□□ -0.32
RPGR-203ENST00000378505 PANK2Q9BZ23 570 aa13.08□□□□□ -0.32
RPGR-203ENST00000378505 SAMD9Q5K651 1589 aa13.08□□□□□ -0.32
RPGR-203ENST00000378505 BIN1O00499 593 aa13.08□□□□□ -0.32
RPGR-203ENST00000378505 ERLIN2O94905 339 aa13.08□□□□□ -0.32
RPGR-203ENST00000378505 F13A1P00488 732 aa13.08□□□□□ -0.32
RPGR-203ENST00000378505 TMCO3Q6UWJ1 677 aa13.08□□□□□ -0.32
RPGR-203ENST00000378505 ZNF444Q8N0Y2 327 aaPredicted RBP13.08□□□□□ -0.32
RPGR-203ENST00000378505 PA2G4Q9UQ80 394 aaKnown RBP13.08□□□□□ -0.32
RPGR-203ENST00000378505 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
RPGR-203ENST00000378505 ZNF397Q8NF99 534 aaPredicted RBP13.08□□□□□ -0.32
RPGR-203ENST00000378505 KIF21AQ7Z4S6 1674 aa13.08□□□□□ -0.32
RPGR-203ENST00000378505 URI1O94763 535 aaPredicted RBP13.07□□□□□ -0.32
RPGR-203ENST00000378505 CCDC102BQ68D86 513 aa13.07□□□□□ -0.32
RPGR-203ENST00000378505 MFSD6Q6ZSS7 791 aa13.07□□□□□ -0.32
RPGR-203ENST00000378505 C16orf45Q96MC5 204 aaPredicted RBP13.07□□□□□ -0.32
RPGR-203ENST00000378505 KLF18A0A0U1RQI7 1052 aa13.07□□□□□ -0.32
RPGR-203ENST00000378505 CCDC194A0A1B0GVG4 234 aa13.07□□□□□ -0.32
RPGR-203ENST00000378505 ZCRB1Q8TBF4 217 aaKnown RBP13.07□□□□□ -0.32
RPGR-203ENST00000378505 PATL2C9JE40 543 aaKnown RBP13.07□□□□□ -0.32
RPGR-203ENST00000378505 FAM200AQ8TCP9 573 aa13.07□□□□□ -0.32
RPGR-203ENST00000378505 MAST1Q9Y2H9 1570 aa13.07□□□□□ -0.32
RPGR-203ENST00000378505 NCKAP5LQ9HCH0 1330 aa13.07□□□□□ -0.32
RPGR-203ENST00000378505 CHL1O00533 1208 aa13.07□□□□□ -0.32
RPGR-203ENST00000378505 NLRP5P59047 1200 aa13.07□□□□□ -0.32
RPGR-203ENST00000378505 GBP3Q9H0R5 595 aa13.07□□□□□ -0.32
RPGR-203ENST00000378505 PTPRTO14522 1441 aa13.06□□□□□ -0.32
RPGR-203ENST00000378505 NPHP3Q7Z494 1330 aa13.06□□□□□ -0.32
RPGR-203ENST00000378505 GOLGA6L10A6NI86 522 aa13.06□□□□□ -0.32
RPGR-203ENST00000378505 KIF5CO60282 957 aa13.06□□□□□ -0.32
RPGR-203ENST00000378505 ATP2B3Q16720 1220 aa13.06□□□□□ -0.32
RPGR-203ENST00000378505 BABAM1Q9NWV8 329 aa13.06□□□□□ -0.32
RPGR-203ENST00000378505 ZGPATQ8N5A5 531 aaKnown RBP13.06□□□□□ -0.32
RPGR-203ENST00000378505 LRRC59Q96AG4 307 aaKnown RBP13.06□□□□□ -0.32
RPGR-203ENST00000378505 RAB34Q9BZG1 259 aa13.06□□□□□ -0.32
RPGR-203ENST00000378505 TRMT1Q9NXH9 659 aaKnown RBP13.06□□□□□ -0.32
RPGR-203ENST00000378505 TBX22Q9Y458 520 aa13.06□□□□□ -0.32
RPGR-203ENST00000378505 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
RPGR-203ENST00000378505 NMIQ13287 307 aaPredicted RBP13.06□□□□□ -0.32
RPGR-203ENST00000378505 CCDC148Q8NFR7 591 aa13.06□□□□□ -0.32
RPGR-203ENST00000378505 LRRC2Q9BYS8 371 aa13.06□□□□□ -0.32
RPGR-203ENST00000378505 PDCL3Q9H2J4 239 aa13.06□□□□□ -0.32
RPGR-203ENST00000378505 ANKIB1Q9P2G1 1089 aa13.06□□□□□ -0.32
RPGR-203ENST00000378505 PPFIA3O75145 1194 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 DNM1Q05193 864 aaKnown RBP13.05□□□□□ -0.32
RPGR-203ENST00000378505 KANK3Q6NY19 840 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 ZNF76P36508 570 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 AK2P54819 239 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 KIF4BQ2VIQ3 1234 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 TMC6Q7Z403 805 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 KCNG4Q8TDN1 519 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 DACT1Q9NYF0 836 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 EDC4Q6P2E9 1401 aaKnown RBP13.05□□□□□ -0.32
RPGR-203ENST00000378505 FKBP15Q5T1M5 1219 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 HOXC9P31274 260 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
RPGR-203ENST00000378505 CWF19L2Q2TBE0 894 aaKnown RBP13.05□□□□□ -0.32
RPGR-203ENST00000378505 Q6ZUG5 572 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 G2E3Q7L622 706 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 PRIMPOLQ96LW4 560 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 SLC26A6Q9BXS9 759 aa13.05□□□□□ -0.32
RPGR-203ENST00000378505 TRPM2O94759 1503 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms